Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1149G099 Amborella trichopoda HOM05D006231 ORTHO05D007857 2.8e-165 585.5 360 100.0
Nn4g22867 Nelumbo nucifera HOM05D006231 ORTHO05D007857 2.8e-64 250.0 178 68.0
Eucgr.B02548 Eucalyptus grandis HOM05D006231 ORTHO05D007857 3.8e-61 239.6 183 66.7
Gohir.A05G318600 Gossypium hirsutum HOM05D006231 ORTHO05D007857 3.2e-60 236.5 179 67.0
TAR629G0133 Trochodendron aralioides HOM05D006231 ORTHO05D007857 7.1e-60 235.3 177 66.1
Gohir.D05G320900 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.6e-59 234.2 179 67.0
Gorai.009G344200 Gossypium raimondii HOM05D006231 ORTHO05D007857 1.6e-59 234.2 179 65.9
Thecc.02G247800 Theobroma cacao HOM05D006231 ORTHO05D007857 3.5e-59 233.0 185 65.4
PGSC0003DMG400004132 Solanum tuberosum HOM05D006231 ORTHO05D007857 4.6e-59 232.6 185 63.2
Hma1.2p1_1017F.1_g248270 Hydrangea macrophylla HOM05D006231 ORTHO05D007857 1.0e-58 231.5 180 65.6
Gohir.D02G165000 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.3e-58 231.1 179 66.5
Nitab4.5_0004963g0030 Nicotiana tabacum HOM05D006231 ORTHO05D007857 1.3e-58 231.1 179 64.2
CiPaw.05G148900 Carya illinoinensis HOM05D006231 ORTHO05D007857 1.8e-58 230.7 189 61.9
Manes.01G197500 Manihot esculenta HOM05D006231 ORTHO05D007857 1.8e-58 230.7 192 61.5
Lsat_1_v5_gn_8_158260 Lactuca sativa HOM05D006231 ORTHO05D007857 3.0e-58 229.9 190 60.5
CSS0002380 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 6.7e-58 228.8 178 63.5
CSS0044234 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 6.7e-58 228.8 178 63.5
CAN.G505.18 Capsicum annuum HOM05D006231 ORTHO05D007857 8.7e-58 228.4 179 63.7
Nitab4.5_0001474g0130 Nicotiana tabacum HOM05D006231 ORTHO05D007857 8.7e-58 228.4 179 63.7
Ciclev10032202m.g Citrus clementina HOM05D006231 ORTHO05D007857 1.1e-57 228.0 182 63.2
ECA233G1652 Erigeron canadensis HOM05D006231 ORTHO05D007857 1.1e-57 228.0 193 59.6
SEGI_07841 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 1.1e-57 228.0 176 61.9
COL.COLO4_19536 Corchorus olitorius HOM05D006231 ORTHO05D007857 1.9e-57 227.3 184 62.5
HanXRQChr08g0208971 Helianthus annuus HOM05D006231 ORTHO05D007857 3.3e-57 226.5 188 58.5
MELO3C012017.2 Cucumis melo HOM05D006231 ORTHO05D007857 4.3e-57 226.1 188 60.6
TWI36G0577 Tripterygium wilfordii HOM05D006231 ORTHO05D007857 4.3e-57 226.1 182 64.3
Sed0009573 Sechium edule HOM05D006231 ORTHO05D007857 9.6e-57 224.9 178 63.5
Sopen05g001920 Solanum pennellii HOM05D006231 ORTHO05D007857 1.3e-56 224.6 185 60.5
Carub.0001s2346 Capsella rubella HOM05D006231 ORTHO05D007857 1.6e-56 224.2 194 58.8
ClCG05G025120 Citrullus lanatus HOM05D006231 ORTHO05D007857 1.6e-56 224.2 181 62.4
Duzib248G0169 Durio zibethinus HOM05D006231 ORTHO05D007857 2.1e-56 223.8 179 64.8
Cc11_g14350 Coffea canephora HOM05D006231 ORTHO05D007857 2.8e-56 223.4 178 61.8
CsaV3_5G031780 Cucumis sativus L. HOM05D006231 ORTHO05D007857 3.7e-56 223.0 181 61.3
PSO478G5064 Papaver somniferum HOM05D006231 ORTHO05D007857 3.7e-56 223.0 178 60.7
PSO017G5161 Papaver somniferum HOM05D006231 ORTHO05D007857 4.8e-56 222.6 179 59.8
Aqoxy3G00933 Aquilegia oxysepala HOM05D006231 ORTHO05D007857 6.2e-56 222.2 179 60.3
Thhalv10008192m.g Eutrema salsugineum HOM05D006231 ORTHO05D007857 8.1e-56 221.9 185 61.1
Potri.008G146000 Populus trichocarpa HOM05D006231 ORTHO05D007857 8.1e-56 221.9 191 59.7
PGR119G0912 Punica granatum HOM05D006231 ORTHO05D007857 8.1e-56 221.9 190 59.5
QL03p062170 Quercus lobata HOM05D006231 ORTHO05D007857 1.1e-55 221.5 188 61.7
CARHR024340 Cardamine hirsuta HOM05D006231 ORTHO05D007857 1.4e-55 221.1 186 60.8
Dinv24894 Davidia involucrata HOM05D006231 ORTHO05D007857 1.8e-55 220.7 185 61.1
Lalb_Chr09g0326451 Lupinus albus HOM05D006231 ORTHO05D007857 1.8e-55 220.7 187 60.4
vmacro16274 Vaccinium macrocarpon HOM05D006231 ORTHO05D007857 1.8e-55 220.7 178 61.8
Sc11g0001330 Simmondsia chinensis HOM05D006231 ORTHO05D007857 3.1e-55 219.9 178 59.6
C05p23180 Brassica napus HOM05D006231 ORTHO05D007857 4.0e-55 219.5 181 60.8
CDE10G0954 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 4.0e-55 219.5 175 64.0
DCAR_024529 Daucus carota HOM05D006231 ORTHO05D007857 4.0e-55 219.5 180 61.7
MSTRG.613 Avicennia marina HOM05D006231 ORTHO05D007857 5.3e-55 219.2 183 60.1
Cfa009127 Carpinus fangiana HOM05D006231 ORTHO05D007857 6.9e-55 218.8 185 61.6
Sp1g21370 Schrenkiella parvula HOM05D006231 ORTHO05D007857 6.9e-55 218.8 185 59.5
EL10Ac6g13629 Beta vulgaris HOM05D006231 ORTHO05D007857 9.0e-55 218.4 192 57.8
CANSAT01G1818 Cannabis sativa HOM05D006231 ORTHO05D007857 9.0e-55 218.4 184 60.9
Actinidia15012 Actinidia chinensis HOM05D006231 ORTHO05D007857 1.2e-54 218.0 178 61.2
BcaB07g32378 Brassica carinata HOM05D006231 ORTHO05D007857 1.2e-54 218.0 187 59.9
Oeu046714.1 Olea europaea HOM05D006231 ORTHO05D007857 1.2e-54 218.0 178 61.8
THA.LOC104822957 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 1.2e-54 218.0 187 61.0
Hund25325 Selenicereus undatus HOM05D006231 ORTHO05D007857 1.5e-54 217.6 181 59.1
Haze_12158 Corylus avellana HOM05D006231 ORTHO05D007857 2.0e-54 217.2 185 62.2
Psat2g109920 Pisum sativum HOM05D006231 ORTHO05D007857 3.4e-54 216.5 192 58.9
CDE10G0637 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 4.5e-54 216.1 174 63.8
Ah.03g132450 Amaranthus hybridus HOM05D006231 ORTHO05D007857 5.8e-54 215.7 191 56.0
Potri.010G095800 Populus trichocarpa HOM05D006231 ORTHO05D007857 5.8e-54 215.7 191 58.6
Lj2g0015887 Lotus japonicus HOM05D006231 ORTHO05D007857 7.6e-54 215.3 191 58.1
Aa31LG7G7830 Aethionema arabicum HOM05D006231 ORTHO05D007857 1.0e-53 214.9 183 60.7
AT1G24040 Arabidopsis thaliana HOM05D006231 ORTHO05D007857 1.0e-53 214.9 187 59.4
MD16G1088300 Malus domestica HOM05D006231 ORTHO05D007857 1.0e-53 214.9 192 59.4
THA.LOC104822056 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 1.0e-53 214.9 187 59.4
AL1G37790 Arabidopsis lyrata HOM05D006231 ORTHO05D007857 1.3e-53 214.5 185 60.0
BcaC05g26301 Brassica carinata HOM05D006231 ORTHO05D007857 1.3e-53 214.5 189 58.7
BolC5t31019H Brassica oleracea HOM05D006231 ORTHO05D007857 1.3e-53 214.5 189 58.7
RcHm_v2.0_Chr4g0444351 Rosa chinensis HOM05D006231 ORTHO05D007857 2.9e-53 213.4 210 55.7
Atru.chr11.1975 Acer truncatum HOM05D006231 ORTHO05D007857 3.8e-53 213.0 194 58.2
unitig_22.g6476 Utricularia gibba HOM05D006231 ORTHO05D007857 3.8e-53 213.0 182 59.3
SalBow2G0481 Salvia bowleyana HOM05D006231 ORTHO05D007857 4.9e-53 212.6 178 58.4
AUR62005324 Chenopodium quinoa HOM05D006231 ORTHO05D007857 6.5e-53 212.2 189 55.6
Migut.L01438 Erythranthe guttata HOM05D006231 ORTHO05D007857 6.5e-53 212.2 180 58.9
FvH4_4g34910 Fragaria vesca HOM05D006231 ORTHO05D007857 8.4e-53 211.8 210 55.2
MBI15_g12952_MAGBIO Magnolia biondii HOM05D006231 ORTHO05D007857 8.4e-53 211.8 178 59.6
Peaxi162Scf00421g00419 Petunia axillaris HOM05D006231 ORTHO05D007857 8.4e-53 211.8 188 58.5
Prupe.1G258300 Prunus persica HOM05D006231 ORTHO05D007857 2.5e-52 210.3 195 58.5
Sabra08G0111000 Salix brachista HOM05D006231 ORTHO05D007857 5.5e-52 209.1 191 57.1
arahy.Tifrunner.gnm1.ann1.FQS9XH Arachis hypogaea HOM05D006231 ORTHO05D007857 1.6e-51 207.6 185 57.3
arahy.Tifrunner.gnm1.ann1.XK2UET Arachis hypogaea HOM05D006231 ORTHO05D007857 2.1e-51 207.2 185 57.3
AUR62013974 Chenopodium quinoa HOM05D006231 ORTHO05D007857 2.1e-51 207.2 189 54.5
MD13G1088000 Malus domestica HOM05D006231 ORTHO05D007857 3.5e-51 206.5 195 57.4
Medtr5g035060 Medicago truncatula HOM05D006231 ORTHO05D007857 3.5e-51 206.5 184 57.6
Glyma.02G032100 Glycine max HOM05D006231 ORTHO05D007857 1.0e-50 204.9 197 54.3
FAN12G2615 Fragaria x ananassa HOM05D006231 ORTHO05D007857 1.8e-50 204.1 206 54.4
Glyma.01G034200 Glycine max HOM05D006231 ORTHO05D007857 2.3e-50 203.8 198 54.5
Lj3A1049T58 Lonicera japonica HOM05D006231 ORTHO05D007857 3.0e-50 203.4 218 50.9
CSS0037524 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 3.9e-50 203.0 182 55.5
Ca_04621_v3 Cicer arietinum L. HOM05D006231 ORTHO05D007857 6.7e-50 202.2 181 57.5
VMungo1215G3085 Vigna mungo HOM05D006231 ORTHO05D007857 1.6e-48 197.6 201 53.2
Phvul.002G073400 Phaseolus vulgaris HOM05D006231 ORTHO05D007857 2.1e-48 197.2 207 52.7
A09p40810 Brassica napus HOM05D006231 ORTHO05D007857 3.7e-48 196.4 172 58.1
BraA09t39576Z Brassica rapa HOM05D006231 ORTHO05D007857 3.7e-48 196.4 172 58.1
TPR.G4354 Trifolium pratense HOM05D006231 ORTHO05D007857 3.7e-48 196.4 187 56.1
HPP92_010904 Vanilla planifolia HOM05D006231 ORTHO05D007857 1.1e-47 194.9 178 56.2
SEGI_36756 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 4.1e-47 193.0 179 53.6
FAN22G0458 Fragaria x ananassa HOM05D006231 ORTHO05D007857 9.0e-47 191.8 227 49.3
FAN17G2958 Fragaria x ananassa HOM05D006231 ORTHO05D007857 1.2e-46 191.4 220 50.5
FAN07G0090 Fragaria x ananassa HOM05D006231 ORTHO05D007857 2.0e-46 190.7 222 50.0
SGA_v2.0_scaffold166G38349 Striga asiatica HOM05D006231 ORTHO05D007857 2.2e-45 187.2 228 46.9
Rhsim12G0123300 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.4e-44 184.5 232 46.6
Sabra10G0068400 Salix brachista HOM05D006231 ORTHO05D007857 2.5e-44 183.7 240 44.2
Solyc05g005890.2 Solanum lycopersicum HOM05D006231 ORTHO05D007857 9.3e-44 181.8 138 63.8
GSVIVG01020181001 Vitis vinifera HOM05D006231 ORTHO05D007857 4.6e-43 179.5 132 68.2
Mapoly0005s0071 Marchantia polymorpha HOM05D006231 ORTHO05D007857 1.5e-41 174.5 191 49.2
Pp3c2_6130 Physcomitrium patens HOM05D006231 ORTHO05D007857 7.4e-41 172.2 190 48.4
Pp3c2_6132 Physcomitrium patens HOM05D006231 ORTHO05D007857 7.4e-41 172.2 190 48.4
Zm00001eb424460 Zea mays HOM05D006231 ORTHO05D007857 7.4e-41 172.2 190 50.5
Gorai.005G184900 Gossypium raimondii HOM05D006231 ORTHO05D007857 9.7e-41 171.8 178 54.5
Os04g0465500 Oryza sativa ssp. japonica HOM05D006231 ORTHO05D007857 1.2e-38 164.9 191 48.2
SMO365G0079 Selaginella moellendorffii HOM05D006231 ORTHO05D007857 1.3e-37 161.4 177 44.6
Medtr5g035040 Medicago truncatula HOM05D006231 ORTHO05D007857 6.1e-35 152.5 179 48.0
Zm00001eb348680 Zea mays HOM05D006231 ORTHO05D007857 1.7e-32 144.4 167 47.9
Gohir.A03G141850 Gossypium hirsutum HOM05D006231 ORTHO05D007857 4.1e-31 139.8 110 64.5
AagrBONN_evm.TU.Sc2ySwM_368.2752 Anthoceros agrestis HOM05D006231 ORTHO05D007857 3.2e-28 130.2 167 44.3
CBR_g40430 Chara braunii HOM05D017800 ORTHO05D019665 2.1e-27 127.5 201 39.3
Psat2g109880 Pisum sativum HOM05D006231 ORTHO05D007857 1.1e-25 121.7 112 56.2
Dinv31098 Davidia involucrata HOM05D006231 ORTHO05D007857 4.7e-19 99.8 90 57.8
Medtr5g035050 Medicago truncatula HOM05D006231 ORTHO05D007857 2.0e-17 94.4 70 65.7
PRCOL_00005055 Prasinoderma coloniale HOM05D006231 ORTHO05D007857 1.6e-11 74.7 118 35.6
TAR622G0489 Trochodendron aralioides HOM05D006231 ORTHO05D007857 3.6e-11 73.6 73 56.2
Cre10.g464750 Chlamydomonas reinhardtii HOM05D006231 ORTHO05D007857 5.4e-07 59.7 122 29.5


User provided reference genes

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