Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1149G090 Amborella trichopoda HOM05D000608 ORTHO05D000444 3.0e-53 211.5 99 100.0
Gohir.A01G016000 Gossypium hirsutum HOM05D000608 ORTHO05D000444 2.7e-09 65.5 74 47.3
Migut.M00322 Erythranthe guttata HOM05D000608 ORTHO05D000444 3.0e-08 62.0 60 48.3
ATR0124G051 Amborella trichopoda HOM05D000608 ORTHO05D000444 3.9e-08 61.6 71 45.1
Lj1A733T62 Lonicera japonica HOM05D000608 ORTHO05D000444 1.1e-07 60.1 89 42.7
Gohir.D01G016000 Gossypium hirsutum HOM05D000608 ORTHO05D000444 1.5e-07 59.7 59 54.2
Ca_05303_v3 Cicer arietinum L. HOM05D000608 ORTHO05D000444 1.9e-07 59.3 71 46.5
Gorai.002G017700 Gossypium raimondii HOM05D000608 ORTHO05D000444 3.3e-07 58.5 59 52.5
QL10p035481 Quercus lobata HOM05D000608 ORTHO05D000444 3.3e-07 58.5 79 44.3
QL10p036767 Quercus lobata HOM05D000608 ORTHO05D000444 3.3e-07 58.5 79 44.3
CARHR251820 Cardamine hirsuta HOM05D000608 ORTHO05D000444 4.3e-07 58.2 89 40.4
Lj8A114T41 Lonicera japonica HOM05D000608 ORTHO05D000444 5.6e-07 57.8 59 50.8
AL6G49450 Arabidopsis lyrata HOM05D000608 ORTHO05D000444 7.3e-07 57.4 89 39.3
BcaB01g02533 Brassica carinata HOM05D000608 ORTHO05D000444 7.3e-07 57.4 89 39.3
BcaB01g02534 Brassica carinata HOM05D000608 ORTHO05D000444 7.3e-07 57.4 89 39.3
AT4G03420 Arabidopsis thaliana HOM05D000608 ORTHO05D000444 9.5e-07 57.0 89 39.3
Carub.0006s3364 Capsella rubella HOM05D000608 ORTHO05D000444 9.5e-07 57.0 64 45.3
CDE04G1808 Ceratophyllum demersum HOM05D000608 ORTHO05D000444 9.5e-07 57.0 77 40.3
Sp6g03480 Schrenkiella parvula HOM05D000608 ORTHO05D000444 9.5e-07 57.0 96 39.6
CAN.G248.46 Capsicum annuum HOM05D000608 ORTHO05D000444 1.2e-06 56.6 73 42.5
Oeu041285.1 Olea europaea HOM05D000608 ORTHO05D000444 1.2e-06 56.6 64 45.3
Sopen10g004300 Solanum pennellii HOM05D000608 ORTHO05D000444 1.2e-06 56.6 71 43.7
Nitab4.5_0003793g0010 Nicotiana tabacum HOM05D000608 ORTHO05D000444 1.6e-06 56.2 73 42.5
Peaxi162Scf00132g00067 Petunia axillaris HOM05D000608 ORTHO05D000444 1.6e-06 56.2 76 42.1
MSTRG.14201 Avicennia marina HOM05D000608 ORTHO05D000444 2.1e-06 55.8 67 46.3
Hma1.2p1_0875F.1_g231390 Hydrangea macrophylla HOM05D000608 ORTHO05D000444 2.1e-06 55.8 63 44.4
PGSC0003DMG400018356 Solanum tuberosum HOM05D000608 ORTHO05D000444 2.1e-06 55.8 73 42.5
BcaC04g23972 Brassica carinata HOM05D000608 ORTHO05D000444 2.8e-06 55.5 89 39.3
A09p02760 Brassica napus HOM05D000608 ORTHO05D000444 2.8e-06 55.5 89 39.3
C09p02830 Brassica napus HOM05D000608 ORTHO05D000444 2.8e-06 55.5 89 39.3
BolC9t53209H Brassica oleracea HOM05D000608 ORTHO05D000444 2.8e-06 55.5 89 39.3
BraA09t35918Z Brassica rapa HOM05D000608 ORTHO05D000444 2.8e-06 55.5 89 39.3
DCAR_012994 Daucus carota HOM05D000608 ORTHO05D000444 2.8e-06 55.5 59 49.2
Solyc07g054270.3 Solanum lycopersicum HOM05D000608 ORTHO05D000444 2.8e-06 55.5 76 42.1
Sopen07g028200 Solanum pennellii HOM05D000608 ORTHO05D000444 2.8e-06 55.5 73 42.5
THA.LOC104815957 Tarenaya hassleriana HOM05D000608 ORTHO05D000444 2.8e-06 55.5 83 39.8
Aa31LG5G2880 Aethionema arabicum HOM05D000608 ORTHO05D000444 3.6e-06 55.1 76 44.7
BcaC01g06679 Brassica carinata HOM05D000608 ORTHO05D000444 3.6e-06 55.1 70 44.3
C03p36770 Brassica napus HOM05D000608 ORTHO05D000444 3.6e-06 55.1 70 44.3
BolC3t15991H Brassica oleracea HOM05D000608 ORTHO05D000444 3.6e-06 55.1 70 44.3
Oeu010930.1 Olea europaea HOM05D000608 ORTHO05D000444 3.6e-06 55.1 82 39.0
HPP92_003253 Vanilla planifolia HOM05D000608 ORTHO05D000444 3.6e-06 55.1 79 36.7
AL1G13110 Arabidopsis lyrata HOM05D000608 ORTHO05D000444 4.7e-06 54.7 70 45.7
A03p30440 Brassica napus HOM05D000608 ORTHO05D000444 4.7e-06 54.7 70 44.3
BraA03t12225Z Brassica rapa HOM05D000608 ORTHO05D000444 4.7e-06 54.7 70 44.3
Cfa017819 Carpinus fangiana HOM05D000608 ORTHO05D000444 4.7e-06 54.7 74 43.2
Haze_18390 Corylus avellana HOM05D000608 ORTHO05D000444 4.7e-06 54.7 60 50.0
DCAR_019190 Daucus carota HOM05D000608 ORTHO05D000444 4.7e-06 54.7 59 49.2
Duzib084G1189 Durio zibethinus HOM05D000608 ORTHO05D000444 4.7e-06 54.7 78 38.5
Thhalv10028812m.g Eutrema salsugineum HOM05D000608 ORTHO05D000444 4.7e-06 54.7 70 44.3
PGSC0003DMG400021665 Solanum tuberosum HOM05D000608 ORTHO05D000444 4.7e-06 54.7 71 42.3
Actinidia09873 Actinidia chinensis HOM05D000608 ORTHO05D000444 6.2e-06 54.3 63 47.6
BcaB01g01948 Brassica carinata HOM05D000608 ORTHO05D000444 6.2e-06 54.3 63 46.0
Cpa.g.sc124.8 Carica papaya HOM05D000608 ORTHO05D000444 6.2e-06 54.3 73 42.5
HanXRQChr17g0542611 Helianthus annuus HOM05D000608 ORTHO05D000444 6.2e-06 54.3 67 44.8
Nitab4.5_0000635g0060 Nicotiana tabacum HOM05D000608 ORTHO05D000444 6.2e-06 54.3 78 42.3
Oeu048177.1 Olea europaea HOM05D000608 ORTHO05D000444 6.2e-06 54.3 73 42.5
Peaxi162Scf01191g00004 Petunia axillaris HOM05D000608 ORTHO05D000444 6.2e-06 54.3 73 41.1
THA.LOC104826029 Tarenaya hassleriana HOM05D000608 ORTHO05D000444 6.2e-06 54.3 74 40.5
Nitab4.5_0000998g0060 Nicotiana tabacum HOM05D000608 ORTHO05D000444 8.1e-06 53.9 67 44.8
Solyc10g008480.3 Solanum lycopersicum HOM05D000608 ORTHO05D000444 8.1e-06 53.9 62 46.8
unitig_749.g13955 Utricularia gibba HOM05D000608 ORTHO05D000444 8.1e-06 53.9 85 35.3


User provided reference genes

Program Settings