Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1149G021 Amborella trichopoda HOM05D006272 ORTHO05D007989 3.5e-132 474.9 234 100.0
CDE04G2481 Ceratophyllum demersum HOM05D006272 ORTHO05D006222 6.0e-60 235.0 193 64.2
Nn4g22890 Nelumbo nucifera HOM05D006272 ORTHO05D007524 6.0e-60 235.0 187 61.0
Manes.14G069600 Manihot esculenta HOM05D006272 ORTHO05D007989 2.3e-59 233.0 191 62.8
CiPaw.12G023800 Carya illinoinensis HOM05D006272 ORTHO05D007989 3.0e-59 232.6 157 68.2
Aqoxy3G03085 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 6.7e-59 231.5 158 69.0
Duzib205G0574 Durio zibethinus HOM05D006272 ORTHO05D007989 8.7e-59 231.1 167 65.9
FAN04G2131 Fragaria x ananassa HOM05D006272 ORTHO05D007989 8.7e-59 231.1 196 61.2
FAN13G1305 Fragaria x ananassa HOM05D006272 ORTHO05D007989 8.7e-59 231.1 196 61.2
Sabra15G0096800 Salix brachista HOM05D006272 ORTHO05D007989 2.5e-58 229.6 166 68.7
Thecc.03G005700 Theobroma cacao HOM05D006272 ORTHO05D007989 4.3e-58 228.8 169 65.1
Atru.chr9.2416 Acer truncatum HOM05D006272 ORTHO05D007989 5.7e-58 228.4 170 65.3
MSTRG.4383 Avicennia marina HOM05D006272 ORTHO05D007989 5.7e-58 228.4 164 68.9
Lalb_Chr23g0273081 Lupinus albus HOM05D006272 ORTHO05D007989 5.7e-58 228.4 208 57.7
Potri.015G072000 Populus trichocarpa HOM05D006272 ORTHO05D007989 5.7e-58 228.4 157 70.7
FvH4_5g16490 Fragaria vesca HOM05D006272 ORTHO05D007989 7.4e-58 228.0 194 60.8
MD06G1180000 Malus domestica HOM05D006272 ORTHO05D007989 7.4e-58 228.0 162 68.5
Prupe.5G178100 Prunus persica HOM05D006272 ORTHO05D007989 1.3e-57 227.3 212 56.1
Oeu041583.1 Olea europaea HOM05D006272 ORTHO05D007989 1.6e-57 226.9 153 72.5
Gohir.A03G017300 Gossypium hirsutum HOM05D006272 ORTHO05D007989 2.1e-57 226.5 169 65.1
MD14G1185400 Malus domestica HOM05D006272 ORTHO05D007989 2.1e-57 226.5 143 73.4
Aa31LG3G6090 Aethionema arabicum HOM05D006272 ORTHO05D007989 2.8e-57 226.1 185 60.5
Haze_07447 Corylus avellana HOM05D006272 ORTHO05D007989 2.8e-57 226.1 171 64.9
Glyma.04G179400 Glycine max HOM05D006272 ORTHO05D007989 2.8e-57 226.1 155 69.7
COL.COLO4_04328 Corchorus olitorius HOM05D006272 ORTHO05D007989 4.8e-57 225.3 165 66.7
Gohir.D03G150700 Gossypium hirsutum HOM05D006272 ORTHO05D007989 4.8e-57 225.3 166 65.7
QL10p013391 Quercus lobata HOM05D006272 ORTHO05D007989 4.8e-57 225.3 152 71.7
Ciclev10022132m.g Citrus clementina HOM05D006272 ORTHO05D007989 6.3e-57 224.9 159 68.6
Gorai.003G157900 Gossypium raimondii HOM05D006272 ORTHO05D007989 8.2e-57 224.6 169 64.5
Lj1g0014498 Lotus japonicus HOM05D006272 ORTHO05D007989 8.2e-57 224.6 156 67.3
Carub.0008s1010 Capsella rubella HOM05D006272 ORTHO05D007989 1.1e-56 224.2 188 60.1
Cc04_g13100 Coffea canephora HOM05D006272 ORTHO05D007989 1.1e-56 224.2 132 77.3
Eucgr.B00343 Eucalyptus grandis HOM05D006272 ORTHO05D007989 1.1e-56 224.2 198 58.6
Sed0009129 Sechium edule HOM05D006272 ORTHO05D007989 1.4e-56 223.8 175 63.4
TAR622G0996 Trochodendron aralioides HOM05D006272 ORTHO05D007989 1.4e-56 223.8 170 64.1
Actinidia19083 Actinidia chinensis HOM05D006272 ORTHO05D007989 1.8e-56 223.4 158 67.7
GSVIVG01007814001 Vitis vinifera HOM05D006272 ORTHO05D007989 2.4e-56 223.0 156 68.6
arahy.Tifrunner.gnm1.ann1.I0QXBL Arachis hypogaea HOM05D006272 ORTHO05D007989 3.1e-56 222.6 149 69.8
TPR.G15079 Trifolium pratense HOM05D006272 ORTHO05D007989 3.1e-56 222.6 147 70.7
AT5G50100 Arabidopsis thaliana HOM05D006272 ORTHO05D007989 5.3e-56 221.9 190 58.9
CSS0019620 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 5.3e-56 221.9 164 66.5
CAN.G2099.3 Capsicum annuum HOM05D006272 ORTHO05D007989 5.3e-56 221.9 144 70.8
Migut.D01790 Erythranthe guttata HOM05D006272 ORTHO05D007989 5.3e-56 221.9 189 59.3
Glyma.06G185200 Glycine max HOM05D006272 ORTHO05D007989 5.3e-56 221.9 156 66.7
RcHm_v2.0_Chr7g0179601 Rosa chinensis HOM05D006272 ORTHO05D007989 6.9e-56 221.5 150 70.0
Os04g0668800 Oryza sativa ssp. japonica HOM05D006272 ORTHO05D007989 9.0e-56 221.1 202 56.9
Aqoxy3G03086 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 1.2e-55 220.7 158 67.1
MD06G1180300 Malus domestica HOM05D006272 ORTHO05D007989 1.2e-55 220.7 170 65.3
PSO063G7353 Papaver somniferum HOM05D006272 ORTHO05D007989 1.5e-55 220.3 158 65.2
Solyc03g113990.3 Solanum lycopersicum HOM05D006272 ORTHO05D007989 1.5e-55 220.3 130 77.7
Sopen03g033040 Solanum pennellii HOM05D006272 ORTHO05D007989 2.0e-55 219.9 130 77.7
Thhalv10014644m.g Eutrema salsugineum HOM05D006272 ORTHO05D007989 2.6e-55 219.5 184 58.7
Zm00001eb433220 Zea mays HOM05D006272 ORTHO05D007989 2.6e-55 219.5 203 55.2
HanXRQChr16g0503601 Helianthus annuus HOM05D006272 ORTHO05D007989 3.4e-55 219.2 141 70.2
Phvul.009G181400 Phaseolus vulgaris HOM05D006272 ORTHO05D007989 3.4e-55 219.2 147 70.1
Ca_16206_v3 Cicer arietinum L. HOM05D006272 ORTHO05D007989 4.5e-55 218.8 154 66.9
AL8G24090 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 5.9e-55 218.4 190 58.4
CANSAT80G1784 Cannabis sativa HOM05D006272 ORTHO05D007989 7.6e-55 218.0 144 70.1
ClCG06G016760 Citrullus lanatus HOM05D006272 ORTHO05D007989 7.6e-55 218.0 171 63.2
Lj5A121G99 Lonicera japonica HOM05D006272 ORTHO05D007989 1.0e-54 217.6 210 54.8
CsaV3_1G001760 Cucumis sativus L. HOM05D006272 ORTHO05D007989 1.3e-54 217.2 158 67.1
Medtr3g078320 Medicago truncatula HOM05D006272 ORTHO05D007989 1.3e-54 217.2 147 68.0
PSO832G1007 Papaver somniferum HOM05D006272 ORTHO05D007989 1.7e-54 216.9 158 63.9
MELO3C017116.2 Cucumis melo HOM05D006272 ORTHO05D007989 2.2e-54 216.5 158 67.7
FAN18G3972 Fragaria x ananassa HOM05D006272 ORTHO05D007989 2.2e-54 216.5 213 55.4
PGR083G1342 Punica granatum HOM05D006272 ORTHO05D007989 2.2e-54 216.5 154 64.9
Sp6g11960 Schrenkiella parvula HOM05D006272 ORTHO05D007989 2.2e-54 216.5 187 57.8
PGSC0003DMG400024586 Solanum tuberosum HOM05D006272 ORTHO05D007989 2.9e-54 216.1 130 76.2
HPP92_028587 Vanilla planifolia HOM05D006272 ORTHO05D007989 2.9e-54 216.1 197 56.3
C09p38510 Brassica napus HOM05D006272 ORTHO05D007989 3.8e-54 215.7 183 58.5
vmacro16592 Vaccinium macrocarpon HOM05D006272 ORTHO05D007989 3.8e-54 215.7 147 70.7
BcaC04g20846 Brassica carinata HOM05D006272 ORTHO05D007989 5.0e-54 215.3 160 64.4
BolC9t56708H Brassica oleracea HOM05D006272 ORTHO05D007989 5.0e-54 215.3 160 64.4
Lsat_1_v5_gn_4_72700 Lactuca sativa HOM05D006272 ORTHO05D007989 5.0e-54 215.3 209 54.1
Sc12g0005560 Simmondsia chinensis HOM05D006272 ORTHO05D007989 5.0e-54 215.3 136 72.8
VMungo1309G0353 Vigna mungo HOM05D006272 ORTHO05D007989 5.0e-54 215.3 147 68.0
BcaB08g35362 Brassica carinata HOM05D006272 ORTHO05D007989 6.5e-54 214.9 163 64.4
CSS0043549 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 6.5e-54 214.9 156 66.7
EL10Ac5g10820 Beta vulgaris HOM05D006272 ORTHO05D007989 1.4e-53 213.8 142 69.7
Psat5g113800 Pisum sativum HOM05D006272 ORTHO05D007989 1.4e-53 213.8 159 64.8
Rhsim12G0162200 Rhododendron simsii HOM05D006272 ORTHO05D007989 1.4e-53 213.8 128 75.8
THA.LOC104809256 Tarenaya hassleriana HOM05D006272 ORTHO05D007989 1.9e-53 213.4 183 59.0
Ah.11g046120 Amaranthus hybridus HOM05D006272 ORTHO05D007989 2.5e-53 213.0 142 68.3
BraSC37t46149Z Brassica rapa HOM05D006272 ORTHO05D007989 2.5e-53 213.0 160 63.1
ECA232G4277 Erigeron canadensis HOM05D006272 ORTHO05D007989 3.2e-53 212.6 134 71.6
AUR62031036 Chenopodium quinoa HOM05D006272 ORTHO05D007989 5.5e-53 211.8 130 73.8
A10p08550 Brassica napus HOM05D006272 ORTHO05D007989 7.2e-53 211.5 160 63.1
Nitab4.5_0006432g0010 Nicotiana tabacum HOM05D006272 ORTHO05D007989 1.2e-52 210.7 134 75.4
Hund09410 Selenicereus undatus HOM05D006272 ORTHO05D007989 4.6e-52 208.8 167 62.9
AUR62008277 Chenopodium quinoa HOM05D006272 ORTHO05D007989 7.9e-52 208.0 132 70.5
SGA_v2.0_scaffold114G31850 Striga asiatica HOM05D006272 ORTHO05D007989 7.9e-52 208.0 151 65.6
DCAR_021559 Daucus carota HOM05D006272 ORTHO05D007989 1.8e-51 206.8 146 65.1
arahy.Tifrunner.gnm1.ann1.LZB4LR Arachis hypogaea HOM05D006272 ORTHO05D007989 3.0e-51 206.1 138 68.8
MBI15_g12943_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 3.9e-51 205.7 202 55.0
Cfa019077 Carpinus fangiana HOM05D006272 ORTHO05D007989 6.7e-51 204.9 162 63.0
Cpa.g.c38966 Carica papaya HOM05D006272 ORTHO05D007989 4.3e-50 202.2 124 74.2
Nitab4.5_0001422g0120 Nicotiana tabacum HOM05D006272 ORTHO05D007989 4.3e-50 202.2 134 72.4
Mapoly0071s0065 Marchantia polymorpha HOM05D006272 ORTHO05D007989 1.1e-48 197.6 152 59.9
unitig_46.g18473 Utricularia gibba HOM05D004430 ORTHO05D007989 1.1e-48 197.6 162 60.5
Peaxi162Scf00017g02427 Petunia axillaris HOM05D006272 ORTHO05D007989 1.1e-45 187.6 153 61.4
Pp3c1_15150 Physcomitrium patens HOM05D006272 ORTHO05D007989 1.4e-45 187.2 131 66.4
FAN08G1485 Fragaria x ananassa HOM05D006272 ORTHO05D007989 2.7e-44 183.0 226 50.0
CSS0030983 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 3.9e-43 179.1 130 68.5
CBR_g17090 Chara braunii HOM05D006272 ORTHO05D007989 2.6e-42 176.4 152 52.6
TWI15G0925 Tripterygium wilfordii HOM05D006272 ORTHO05D007989 3.1e-40 169.5 98 78.6
Sed0028033 Sechium edule HOM05D006272 ORTHO05D007989 1.5e-39 167.2 129 63.6
SMO134G0173 Selaginella moellendorffii HOM05D006272 ORTHO05D007989 6.5e-38 161.8 111 64.0
CARHR258530 Cardamine hirsuta HOM05D006272 ORTHO05D007989 3.1e-32 142.9 169 46.2
AL8G10070 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 3.8e-30 136.0 93 71.0
Cre03.g145587 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 8.5e-30 134.8 132 47.0
Hma1.2p1_1643F.1_g295250 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 3.2e-29 132.9 103 61.2
Hma1.2p1_2351F.1_g320495 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 3.2e-29 132.9 103 61.2
PRCOL_00006774 Prasinoderma coloniale HOM05D006272 ORTHO05D007989 4.2e-29 132.5 122 52.5
MBI15_g10564_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 1.2e-26 124.4 127 52.8
MCO16G260 Micromonas commoda HOM05D006272 ORTHO05D007989 5.7e-26 122.1 127 42.5
SalBow3G0460 Salvia bowleyana HOM05D006272 ORTHO05D007989 2.2e-25 120.2 79 69.6
QL12p034838 Quercus lobata HOM05D006272 ORTHO05D007989 3.7e-25 119.4 76 73.7
Gohir.A03G017120 Gossypium hirsutum HOM05D006272 ORTHO05D007989 1.5e-21 107.5 91 59.3
Dinv09172 Davidia involucrata HOM05D006272 ORTHO05D007989 4.2e-21 105.9 82 59.8
SalBow3G4540 Salvia bowleyana HOM05D006272 ORTHO05D007989 7.2e-21 105.1 74 66.2
Cpa.g.c35589.1 Carica papaya HOM05D006272 ORTHO05D007989 5.2e-19 99.0 78 59.0
Cre02.g095077 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 2.2e-17 93.6 131 35.1
TPR.G22672 Trifolium pratense HOM05D006272 ORTHO05D007989 2.3e-06 57.0 43 55.8
vmacro22872 Vaccinium macrocarpon HOM05D006272 ORTHO05D007989 2.3e-06 57.0 129 31.0
Cre03.g208049 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D139805 6.6e-06 55.5 76 35.5


User provided reference genes

Program Settings