Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1145G080 Amborella trichopoda HOM05D000004 ORTHO05D000002 1.5e-62 242.7 125 100.0
Psat2g047800 Pisum sativum HOM05D000004 ORTHO05D000002 5.2e-10 68.2 117 34.2
TPR.G27313 Trifolium pratense HOM05D000004 ORTHO05D000002 1.2e-09 67.0 123 32.5
ECA246G2677 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.5e-09 66.6 112 34.8
Psat5g099160 Pisum sativum HOM05D000004 ORTHO05D000002 1.5e-09 66.6 117 33.3
Psat7g017240 Pisum sativum HOM05D000004 ORTHO05D000002 2.6e-09 65.9 117 33.3
Psat5g213880 Pisum sativum HOM05D000004 ORTHO05D000002 4.4e-09 65.1 137 28.5
COL.COLO4_24818 Corchorus olitorius HOM05D000004 ORTHO05D000002 5.8e-09 64.7 143 30.8
TWI77G0663 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 7.5e-09 64.3 128 30.5
TAR351G0002 Trochodendron aralioides HOM05D000004 ORTHO05D000002 1.7e-08 63.2 128 32.8
TAR481G0005 Trochodendron aralioides HOM05D000004 ORTHO05D000002 1.7e-08 63.2 83 39.8
COL.COLO4_19395 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.9e-08 62.4 91 37.4
Atru.chr2.2548 Acer truncatum HOM05D003506 ORTHO05D004063 4.9e-08 61.6 86 37.2
COL.COLO4_27446 Corchorus olitorius HOM05D000004 ORTHO05D000002 4.9e-08 61.6 99 35.4
PSO170G5011 Papaver somniferum HOM05D000004 ORTHO05D000002 4.9e-08 61.6 137 29.2
PSO541G4684 Papaver somniferum HOM05D000004 ORTHO05D000002 4.9e-08 61.6 123 33.3
PSO675G0046 Papaver somniferum HOM05D000004 ORTHO05D000002 4.9e-08 61.6 83 39.8
Psat0s3835g0040 Pisum sativum HOM05D000004 ORTHO05D000002 4.9e-08 61.6 90 34.4
Psat1g072000 Pisum sativum HOM05D000004 ORTHO05D000002 6.4e-08 61.2 90 35.6
PSO170G1160 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-07 60.5 137 28.5
PSO384G1149 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-07 60.5 78 37.2
Psat0s3433g0040 Pisum sativum HOM05D000004 ORTHO05D000002 1.1e-07 60.5 90 35.6
Psat3g181760 Pisum sativum HOM05D000004 ORTHO05D000002 1.1e-07 60.5 134 29.1
Actinidia17954 Actinidia chinensis HOM05D000004 ORTHO05D000002 1.9e-07 59.7 92 34.8
CSS0007557 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.9e-07 59.7 120 31.7
COL.COLO4_36693 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.9e-07 59.7 102 34.3
Oeu037036.1 Olea europaea HOM05D000004 ORTHO05D000002 1.9e-07 59.7 129 31.8
ECA246G1944 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.4e-07 59.3 93 38.7
Manes.17G007266 Manihot esculenta HOM05D000004 ORTHO05D000002 2.4e-07 59.3 114 29.8
QL05p032758 Quercus lobata HOM05D000004 ORTHO05D000002 2.4e-07 59.3 89 33.7
ECA234G2434 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.2e-07 58.9 91 36.3
Nn2g14669 Nelumbo nucifera HOM05D000004 ORTHO05D000002 3.2e-07 58.9 59 45.8
QL03p012718 Quercus lobata HOM05D000004 ORTHO05D050647 3.2e-07 58.9 96 36.5
Sopen10g028470 Solanum pennellii HOM05D000004 ORTHO05D000002 3.2e-07 58.9 93 31.2
Atru.chr1.2388 Acer truncatum HOM05D000004 ORTHO05D000002 4.1e-07 58.5 121 35.5
COL.COLO4_03641 Corchorus olitorius HOM05D000004 ORTHO05D000002 4.1e-07 58.5 125 33.6
TPR.G2300 Trifolium pratense HOM05D000004 ORTHO05D000002 4.1e-07 58.5 117 31.6
TWI39G0003 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 4.1e-07 58.5 125 32.0
COL.COLO4_10143 Corchorus olitorius HOM05D000004 ORTHO05D000002 5.4e-07 58.2 128 30.5
COL.COLO4_19779 Corchorus olitorius HOM05D052653 ORTHO05D000002 5.4e-07 58.2 83 38.6
Psat4g109400 Pisum sativum HOM05D006592 ORTHO05D008122 5.4e-07 58.2 88 36.4
SHI02379 Sapria himalayana HOM05D000004 ORTHO05D000002 5.4e-07 58.2 119 29.4
Psat5g251080 Pisum sativum HOM05D000004 ORTHO05D000002 7.1e-07 57.8 112 33.0
ECA232G0982 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.2e-07 57.4 72 41.7
ECA247G3996 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.2e-07 57.4 91 36.3
PSO455G0227 Papaver somniferum HOM05D000004 ORTHO05D000002 9.2e-07 57.4 82 40.2
COL.COLO4_20628 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.2e-06 57.0 88 36.4
COL.COLO4_36747 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.2e-06 57.0 87 36.8
ECA246G0443 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.2e-06 57.0 88 35.2
Nn6g31876 Nelumbo nucifera HOM05D000004 ORTHO05D000002 1.2e-06 57.0 81 39.5
Psat3g181800 Pisum sativum HOM05D000004 ORTHO05D000002 1.2e-06 57.0 87 34.5
Psat4g028160 Pisum sativum HOM05D000004 ORTHO05D000002 1.2e-06 57.0 88 36.4
Psat4g134960 Pisum sativum HOM05D000004 ORTHO05D000002 1.2e-06 57.0 88 36.4
CAN.G22.27 Capsicum annuum HOM05D000004 ORTHO05D000002 1.6e-06 56.6 106 29.2
Manes.06G033812 Manihot esculenta HOM05D000004 ORTHO05D000002 1.6e-06 56.6 118 28.8
Manes.17G016004 Manihot esculenta HOM05D000004 ORTHO05D000002 1.6e-06 56.6 118 28.8
Manes.17G118357 Manihot esculenta HOM05D000004 ORTHO05D000002 1.6e-06 56.6 118 28.8
Psat0s1551g0120 Pisum sativum HOM05D000004 ORTHO05D000002 1.6e-06 56.6 90 31.1
Psat3g197960 Pisum sativum HOM05D000004 ORTHO05D000002 1.6e-06 56.6 90 31.1
Psat6g093200 Pisum sativum HOM05D000004 ORTHO05D000002 1.6e-06 56.6 94 31.9
QL02p059512 Quercus lobata HOM05D000004 ORTHO05D000002 1.6e-06 56.6 87 35.6
SHI16403 Sapria himalayana HOM05D000004 ORTHO05D000002 1.6e-06 56.6 119 30.3
vmacro19668 Vaccinium macrocarpon HOM05D000792 ORTHO05D004195 1.6e-06 56.6 70 35.7
COL.COLO4_12903 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.1e-06 56.2 88 36.4
QL10p040115 Quercus lobata HOM05D000004 ORTHO05D000002 2.1e-06 56.2 87 33.3
TPR.G6317 Trifolium pratense HOM05D000004 ORTHO05D000002 2.1e-06 56.2 119 31.9
VMungo1127G2005 Vigna mungo HOM05D000390 ORTHO05D000002 2.1e-06 56.2 92 31.5
CSS0031064 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.7e-06 55.8 132 30.3
COL.COLO4_22673 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.7e-06 55.8 97 34.0
ECA232G1984 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.7e-06 55.8 88 34.1
ECA246G3805 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.7e-06 55.8 88 35.2
TPR.G7895 Trifolium pratense HOM05D000004 ORTHO05D000048 2.7e-06 55.8 120 32.5
Atru.chr4.870 Acer truncatum HOM05D000004 ORTHO05D000002 3.5e-06 55.5 84 34.5
COL.COLO4_28963 Corchorus olitorius HOM05D000004 ORTHO05D000002 3.5e-06 55.5 96 33.3
SHI16727 Sapria himalayana HOM05D000004 ORTHO05D000002 3.5e-06 55.5 113 30.1
SHI25617 Sapria himalayana HOM05D000004 ORTHO05D000002 3.5e-06 55.5 113 29.2
SGA_v2.0_scaffold145G36018 Striga asiatica HOM05D000802 ORTHO05D004081 4.6e-06 55.1 80 40.0
Manes.08G059801 Manihot esculenta HOM05D000004 ORTHO05D000002 6.0e-06 54.7 122 30.3
Psat4g198400 Pisum sativum HOM05D000004 ORTHO05D000002 6.0e-06 54.7 113 27.4
QL10p043279 Quercus lobata HOM05D000004 ORTHO05D000002 6.0e-06 54.7 87 33.3
TAR506G0003 Trochodendron aralioides HOM05D000004 ORTHO05D000002 6.0e-06 54.7 124 26.6
Cpa.g.sc112.15 Carica papaya HOM05D000004 ORTHO05D000002 7.8e-06 54.3 91 33.0
COL.COLO4_20202 Corchorus olitorius HOM05D000004 ORTHO05D000002 7.8e-06 54.3 96 33.3
COL.COLO4_28149 Corchorus olitorius HOM05D000004 ORTHO05D000002 7.8e-06 54.3 79 38.0
Lj8C91T3 Lonicera japonica HOM05D000004 ORTHO05D000002 7.8e-06 54.3 98 34.7
SHI20498 Sapria himalayana HOM05D000002 ORTHO05D000002 7.8e-06 54.3 119 28.6


User provided reference genes

Program Settings