Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1136G211 Amborella trichopoda HOM05D004409 ORTHO05D005292 6.4e-60 233.8 112 100.0
Dinv28881 Davidia involucrata HOM05D004409 ORTHO05D005292 1.1e-30 136.7 112 56.2
Actinidia31492 Actinidia chinensis HOM05D004409 ORTHO05D005292 3.1e-30 135.2 107 57.9
Actinidia10866 Actinidia chinensis HOM05D004409 ORTHO05D005292 4.1e-30 134.8 108 58.3
CSS0044628 Camellia sinensis var. sinensis HOM05D004409 ORTHO05D005292 2.0e-29 132.5 106 61.3
Potri.003G084000 Populus trichocarpa HOM05D004409 ORTHO05D005292 1.0e-28 130.2 106 56.6
GSVIVG01004835001 Vitis vinifera HOM05D004409 ORTHO05D005292 6.5e-28 127.5 112 56.2
Gohir.D12G214900 Gossypium hirsutum HOM05D004409 ORTHO05D005292 8.5e-28 127.1 104 55.8
TWI60G0543 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 1.1e-27 126.7 102 57.8
Gorai.008G230500 Gossypium raimondii HOM05D004409 ORTHO05D005292 1.4e-27 126.3 104 54.8
Gohir.A12G212400 Gossypium hirsutum HOM05D004409 ORTHO05D005292 1.9e-27 125.9 104 54.8
Thecc.03G239100 Theobroma cacao HOM05D004409 ORTHO05D005292 2.5e-27 125.6 103 58.3
Atru.chr9.1197 Acer truncatum HOM05D004409 ORTHO05D005292 3.2e-27 125.2 102 57.8
Sabra03G0054600 Salix brachista HOM05D004409 ORTHO05D005292 3.2e-27 125.2 106 55.7
Aqoxy3G02644 Aquilegia oxysepala HOM05D004409 ORTHO05D005292 5.5e-27 124.4 102 52.9
ECA240G1407 Erigeron canadensis HOM05D004409 ORTHO05D005292 5.5e-27 124.4 84 67.9
Prupe.5G054600 Prunus persica HOM05D004409 ORTHO05D005292 7.2e-27 124.0 105 61.0
QL12p008592 Quercus lobata HOM05D004409 ORTHO05D005292 2.1e-26 122.5 105 57.1
TAR636G0884 Trochodendron aralioides HOM05D004409 ORTHO05D005292 2.7e-26 122.1 106 54.7
Ciclev10022946m.g Citrus clementina HOM05D004409 ORTHO05D005292 8.0e-26 120.6 108 55.6
Duzib068G1042 Durio zibethinus HOM05D004409 ORTHO05D005292 1.0e-25 120.2 102 54.9
Duzib205G0528 Durio zibethinus HOM05D004409 ORTHO05D005292 1.0e-25 120.2 103 55.3
Manes.01G089900 Manihot esculenta HOM05D004409 ORTHO05D005292 1.0e-25 120.2 105 56.2
THA.LOC104809923 Tarenaya hassleriana HOM05D004409 ORTHO05D005292 1.0e-25 120.2 108 53.7
Hma1.2p1_3159F.1_g333389 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 2.3e-25 119.0 101 54.5
Lsat_1_v5_gn_6_94501 Lactuca sativa HOM05D004409 ORTHO05D005292 2.3e-25 119.0 104 58.7
Sed0027041 Sechium edule HOM05D004409 ORTHO05D005292 2.3e-25 119.0 101 57.4
DCAR_008327 Daucus carota HOM05D004409 ORTHO05D005292 3.0e-25 118.6 83 63.9
GSVIVG01004822001 Vitis vinifera HOM05D004409 ORTHO05D005292 8.8e-25 117.1 100 53.0
GSVIVG01004827001 Vitis vinifera HOM05D004409 ORTHO05D005292 8.8e-25 117.1 100 53.0
MELO3C014170.2 Cucumis melo HOM05D004409 ORTHO05D005292 1.1e-24 116.7 110 55.5
Peaxi162Scf00102g00085 Petunia axillaris HOM05D004409 ORTHO05D005292 2.0e-24 115.9 109 53.2
ATR1136G215 Amborella trichopoda HOM05D004409 ORTHO05D005292 2.6e-24 115.5 101 54.5
COL.COLO4_06685 Corchorus olitorius HOM05D004409 ORTHO05D005292 2.6e-24 115.5 97 54.6
Nitab4.5_0000185g0190 Nicotiana tabacum HOM05D004409 ORTHO05D005292 2.6e-24 115.5 111 48.6
Cfa012334 Carpinus fangiana HOM05D004409 ORTHO05D005292 3.3e-24 115.2 103 54.4
CsaV3_3G002240 Cucumis sativus L. HOM05D004409 ORTHO05D005292 3.3e-24 115.2 111 53.2
CsaV3_3G004710 Cucumis sativus L. HOM05D004409 ORTHO05D005292 3.3e-24 115.2 110 52.7
Duzib068G0789 Durio zibethinus HOM05D004409 ORTHO05D005292 3.3e-24 115.2 98 55.1
ClCG10G002150 Citrullus lanatus HOM05D004409 ORTHO05D005292 5.7e-24 114.4 101 57.4
HanXRQChr03g0089681 Helianthus annuus HOM05D004409 ORTHO05D005292 7.4e-24 114.0 106 52.8
MELO3C013895.2 Cucumis melo HOM05D004409 ORTHO05D005292 9.7e-24 113.6 111 51.4
HanXRQChr03g0089691 Helianthus annuus HOM05D004409 ORTHO05D005292 1.7e-23 112.8 103 54.4
Cc08_g11210 Coffea canephora HOM05D004409 ORTHO05D005292 2.8e-23 112.1 104 51.9
HanXRQChr13g0419061 Helianthus annuus HOM05D004409 ORTHO05D005292 3.7e-23 111.7 109 50.5
Thecc.03G144900 Theobroma cacao HOM05D004409 ORTHO05D005292 8.2e-23 110.5 107 48.6
Duzib205G0410 Durio zibethinus HOM05D004409 ORTHO05D005292 1.1e-22 110.2 106 50.0
CANSAT56G2887 Cannabis sativa HOM05D004409 ORTHO05D005292 1.4e-22 109.8 105 51.4
Lsat_1_v5_gn_6_94401 Lactuca sativa HOM05D004409 ORTHO05D005292 1.4e-22 109.8 104 53.8
Atru.chr6.1971 Acer truncatum HOM05D004409 ORTHO05D005292 1.8e-22 109.4 101 51.5
Ciclev10030379m.g Citrus clementina HOM05D004409 ORTHO05D005292 1.8e-22 109.4 83 57.8
ECA240G0589 Erigeron canadensis HOM05D004409 ORTHO05D005292 4.1e-22 108.2 106 51.9
Cfa012333 Carpinus fangiana HOM05D004409 ORTHO05D005292 5.3e-22 107.8 99 51.5
DCAR_003519 Daucus carota HOM05D004409 ORTHO05D005292 5.3e-22 107.8 83 57.8
Thecc.03G144800 Theobroma cacao HOM05D004409 ORTHO05D005292 7.0e-22 107.5 107 50.5
TWI39G0193 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 7.0e-22 107.5 107 52.3
TWI39G0310 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 7.0e-22 107.5 107 51.4
TWI39G0462 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 9.1e-22 107.1 107 50.5
ATR1136G026 Amborella trichopoda HOM05D004409 ORTHO05D005292 1.2e-21 106.7 107 52.3
COL.COLO4_37301 Corchorus olitorius HOM05D004409 ORTHO05D005292 1.2e-21 106.7 107 47.7
Thecc.03G144700 Theobroma cacao HOM05D004409 ORTHO05D005292 1.2e-21 106.7 103 52.4
Gohir.D13G124300 Gossypium hirsutum HOM05D004409 ORTHO05D005292 2.0e-21 105.9 111 46.8
GSVIVG01004832001 Vitis vinifera HOM05D004409 ORTHO05D005292 2.0e-21 105.9 84 57.1
ECA240G4009 Erigeron canadensis HOM05D004409 ORTHO05D005292 2.6e-21 105.5 77 58.4
COL.COLO4_21695 Corchorus olitorius HOM05D004409 ORTHO05D005292 3.5e-21 105.1 84 56.0
PGSC0003DMG400026212 Solanum tuberosum HOM05D004409 ORTHO05D005292 4.5e-21 104.8 101 49.5
Ciclev10033339m.g Citrus clementina HOM05D004409 ORTHO05D005292 5.9e-21 104.4 84 57.1
Actinidia01026 Actinidia chinensis HOM05D004409 ORTHO05D005292 1.0e-20 103.6 101 47.5
Dinv28880 Davidia involucrata HOM05D001887 ORTHO05D003756 1.0e-20 103.6 102 47.1
EL10Ac1g00121 Beta vulgaris HOM05D004409 ORTHO05D005292 1.7e-20 102.8 104 48.1
CAN.G845.22 Capsicum annuum HOM05D004409 ORTHO05D005292 1.7e-20 102.8 107 50.5
Eucgr.K00114 Eucalyptus grandis HOM05D004409 ORTHO05D005292 2.9e-20 102.1 84 54.8
MD07G1239800 Malus domestica HOM05D004409 ORTHO05D005292 3.8e-20 101.7 93 53.8
CANSAT21G0033 Cannabis sativa HOM05D004409 ORTHO05D005292 5.0e-20 101.3 112 45.5
HanXRQChr13g0418291 Helianthus annuus HOM05D004409 ORTHO05D005292 5.0e-20 101.3 83 59.0
COL.COLO4_32251 Corchorus olitorius HOM05D004409 ORTHO05D005292 6.5e-20 100.9 113 46.9
CAN.G572.17 Capsicum annuum HOM05D004409 ORTHO05D005292 1.1e-19 100.1 95 49.5
Hma1.2p1_1014F.1_g247850 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 1.1e-19 100.1 103 50.5
MD07G1239700 Malus domestica HOM05D004409 ORTHO05D005292 1.5e-19 99.8 105 47.6
CANSAT21G0737 Cannabis sativa HOM05D004409 ORTHO05D005292 1.9e-19 99.4 103 46.6
RcHm_v2.0_Chr1g0372951 Rosa chinensis HOM05D004409 ORTHO05D005292 1.9e-19 99.4 97 49.5
FvH4_7g26400 Fragaria vesca HOM05D004409 ORTHO05D005292 2.5e-19 99.0 103 45.6
PGR142G3629 Punica granatum HOM05D004409 ORTHO05D005292 2.5e-19 99.0 105 46.7
COL.COLO4_37302 Corchorus olitorius HOM05D004409 ORTHO05D005292 3.2e-19 98.6 103 44.7
FAN10G3781 Fragaria x ananassa HOM05D004409 ORTHO05D005292 3.2e-19 98.6 103 44.7
Prupe.7G057100 Prunus persica HOM05D004409 ORTHO05D005292 3.2e-19 98.6 109 47.7
Dinv34530 Davidia involucrata HOM05D004409 ORTHO05D005292 4.2e-19 98.2 102 48.0
PGR042G3450 Punica granatum HOM05D004409 ORTHO05D005292 4.2e-19 98.2 83 50.6
Ciclev10022894m.g Citrus clementina HOM05D004409 ORTHO05D005292 5.5e-19 97.8 83 53.0
DCAR_005587 Daucus carota HOM05D004409 ORTHO05D005292 5.5e-19 97.8 101 48.5
RcHm_v2.0_Chr1g0328171 Rosa chinensis HOM05D004409 ORTHO05D005292 5.5e-19 97.8 103 45.6
HanXRQChr13g0419051 Helianthus annuus HOM05D004409 ORTHO05D005292 7.2e-19 97.4 106 47.2
Thecc.08G189000 Theobroma cacao HOM05D004409 ORTHO05D005292 9.4e-19 97.1 106 44.3
Aqoxy6G00065 Aquilegia oxysepala HOM05D004409 ORTHO05D005292 1.2e-18 96.7 106 44.3
Cpa.g.sc13.213 Carica papaya HOM05D004409 ORTHO05D005292 1.2e-18 96.7 104 47.1
Cc06_g12260 Coffea canephora HOM05D004409 ORTHO05D005292 2.1e-18 95.9 105 43.8
SGA_v2.0_scaffold91G28102 Striga asiatica HOM05D004409 ORTHO05D005292 2.1e-18 95.9 86 51.2
TAR375G0026 Trochodendron aralioides HOM05D004409 ORTHO05D005292 2.1e-18 95.9 106 45.3
GSVIVG01024506001 Vitis vinifera HOM05D004409 ORTHO05D005292 2.1e-18 95.9 102 47.1
TAR375G0484 Trochodendron aralioides HOM05D004409 ORTHO05D005292 2.7e-18 95.5 108 42.6
TAR375G0498 Trochodendron aralioides HOM05D004409 ORTHO05D005292 2.7e-18 95.5 106 45.3
GSVIVG01013894001 Vitis vinifera HOM05D004409 ORTHO05D005292 2.7e-18 95.5 85 52.9
CANSAT56G2756 Cannabis sativa HOM05D004409 ORTHO05D005292 3.6e-18 95.1 102 44.1
RcHm_v2.0_Chr1g0372991 Rosa chinensis HOM05D004409 ORTHO05D005292 3.6e-18 95.1 85 48.2
Peaxi162Scf00391g00715 Petunia axillaris HOM05D004409 ORTHO05D005292 6.1e-18 94.4 101 46.5
RcHm_v2.0_Chr1g0328141 Rosa chinensis HOM05D004409 ORTHO05D005292 8.0e-18 94.0 85 47.1
GSVIVG01004836001 Vitis vinifera HOM05D004409 ORTHO05D005292 8.0e-18 94.0 107 43.0
MSTRG.27238 Avicennia marina HOM05D004409 ORTHO05D005292 1.0e-17 93.6 106 48.1
Hund27103 Selenicereus undatus HOM05D004409 ORTHO05D005292 1.0e-17 93.6 85 49.4
GSVIVG01004838001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.0e-17 93.6 101 44.6
Oeu056339.1 Olea europaea HOM05D004409 ORTHO05D005292 1.4e-17 93.2 114 39.5
GSVIVG01013816001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.4e-17 93.2 85 51.8
Atru.chr9.1196 Acer truncatum HOM05D004409 ORTHO05D005292 1.8e-17 92.8 86 52.3
CANSAT56G0658 Cannabis sativa HOM05D004409 ORTHO05D005292 1.8e-17 92.8 102 43.1
CANSAT56G4079 Cannabis sativa HOM05D004409 ORTHO05D005292 2.3e-17 92.4 102 43.1
Oeu006074.1 Olea europaea HOM05D004409 ORTHO05D005292 4.0e-17 91.7 110 42.7
Dinv25140 Davidia involucrata HOM05D004409 ORTHO05D005292 5.2e-17 91.3 111 43.2
FvH4_7g26430 Fragaria vesca HOM05D004409 ORTHO05D005292 5.2e-17 91.3 80 50.0
GSVIVG01013825001 Vitis vinifera HOM05D004409 ORTHO05D005292 5.2e-17 91.3 106 39.6
Hma1.2p1_1014F.1_g247840 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 6.7e-17 90.9 103 46.6
GSVIVG01024502001 Vitis vinifera HOM05D004409 ORTHO05D005292 8.8e-17 90.5 106 44.3
FAN10G4140 Fragaria x ananassa HOM05D004409 ORTHO05D005292 1.5e-16 89.7 101 44.6
TWI39G0819 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 1.5e-16 89.7 96 46.9
Haze_08359 Corylus avellana HOM05D004409 ORTHO05D005292 2.0e-16 89.4 86 48.8
FAN01G0604 Fragaria x ananassa HOM05D004409 ORTHO05D005292 2.0e-16 89.4 80 50.0
Hma1.2p1_1014F.1_g247830 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 2.0e-16 89.4 98 49.0
Oeu019420.1 Olea europaea HOM05D004409 ORTHO05D005292 2.6e-16 89.0 105 45.7
GSVIVG01013815001 Vitis vinifera HOM05D004409 ORTHO05D005292 2.6e-16 89.0 107 43.9
Migut.H01906 Erythranthe guttata HOM05D004409 ORTHO05D005292 3.3e-16 88.6 102 43.1
FAN03G2468 Fragaria x ananassa HOM05D004409 ORTHO05D005292 4.4e-16 88.2 101 43.6
Thecc.07G180600 Theobroma cacao HOM05D004409 ORTHO05D005292 5.7e-16 87.8 103 41.7
Ciclev10033338m.g Citrus clementina HOM05D004409 ORTHO05D005292 4.8e-15 84.7 97 46.4
Migut.H01907 Erythranthe guttata HOM05D004409 ORTHO05D005292 4.8e-15 84.7 104 41.3
Aa31LG9G14800 Aethionema arabicum HOM05D004409 ORTHO05D005292 1.1e-14 83.6 102 39.2
TAR375G0880 Trochodendron aralioides HOM05D004409 ORTHO05D005292 1.4e-14 83.2 97 44.3
THA.LOC104816486 Tarenaya hassleriana HOM05D004409 ORTHO05D005292 1.8e-14 82.8 78 47.4
FAN06G5092 Fragaria x ananassa HOM05D004409 ORTHO05D005292 2.4e-14 82.4 75 46.7
FAN17G1151 Fragaria x ananassa HOM05D004409 ORTHO05D005292 4.1e-14 81.6 102 42.2
ATR0745G048 Amborella trichopoda HOM05D004409 ORTHO05D005292 7.0e-14 80.9 108 39.8
Actinidia25914 Actinidia chinensis HOM05D004409 ORTHO05D005292 9.1e-14 80.5 84 44.0
Migut.J00932 Erythranthe guttata HOM05D004409 ORTHO05D005292 9.1e-14 80.5 97 42.3
MD07G1239500 Malus domestica HOM05D004409 ORTHO05D005292 9.1e-14 80.5 100 40.0
Cfa012335 Carpinus fangiana HOM05D004409 ORTHO05D005292 1.0e-12 77.0 101 43.6
BcaC01g03728 Brassica carinata HOM05D004409 ORTHO05D005292 1.7e-12 76.3 83 43.4
BcaB04g18966 Brassica carinata HOM05D004409 ORTHO05D005292 3.8e-12 75.1 83 44.6
Sp6g08250 Schrenkiella parvula HOM05D004409 ORTHO05D005292 2.5e-11 72.4 100 40.0
A03p40420 Brassica napus HOM05D004409 ORTHO05D005292 2.1e-10 69.3 78 42.3
C03p49230 Brassica napus HOM05D004409 ORTHO05D005292 2.1e-10 69.3 80 40.0
BolC3t17205H Brassica oleracea HOM05D004409 ORTHO05D005292 2.1e-10 69.3 78 42.3
BraA03t13197Z Brassica rapa HOM05D004409 ORTHO05D005292 2.1e-10 69.3 78 42.3
Eucgr.K00115 Eucalyptus grandis HOM05D004409 ORTHO05D005292 2.1e-10 69.3 106 41.5
Gorai.013G138900 Gossypium raimondii HOM05D004409 ORTHO05D005292 2.7e-10 68.9 71 45.1
CAN.G572.18 Capsicum annuum HOM05D004409 ORTHO05D005292 3.6e-10 68.6 106 34.0
Carub.0006s2782 Capsella rubella HOM05D004409 ORTHO05D005292 3.0e-09 65.5 103 39.8
CARHR260260 Cardamine hirsuta HOM05D004409 ORTHO05D005292 5.2e-09 64.7 81 40.7
Hund15707 Selenicereus undatus HOM05D002739 ORTHO05D002877 8.8e-09 63.9 86 33.7
PSO339G0161 Papaver somniferum HOM05D002739 ORTHO05D002877 1.2e-08 63.5 99 33.3
MD02G1296300 Malus domestica HOM05D002739 ORTHO05D002877 7.5e-08 60.8 107 30.8
FAN10G1712 Fragaria x ananassa HOM05D002739 ORTHO05D002877 9.8e-08 60.5 84 36.9
Nn2g15045 Nelumbo nucifera HOM05D002739 ORTHO05D002877 9.8e-08 60.5 86 32.6
Nn7g36459 Nelumbo nucifera HOM05D002739 ORTHO05D002877 1.7e-07 59.7 108 32.4
PSO384G1869 Papaver somniferum HOM05D002739 ORTHO05D002877 2.2e-07 59.3 86 34.9
Potri.001G023200 Populus trichocarpa HOM05D002739 ORTHO05D002877 2.2e-07 59.3 82 31.7
Actinidia16366 Actinidia chinensis HOM05D002739 ORTHO05D002877 2.8e-07 58.9 78 37.2
BcaB01g02799 Brassica carinata HOM05D004409 ORTHO05D005292 2.8e-07 58.9 103 34.0
SMO236G0006 Selaginella moellendorffii HOM05D038626 ORTHO05D375303 2.8e-07 58.9 84 38.1
C09p37510 Brassica napus HOM05D004489 ORTHO05D032456 3.7e-07 58.5 102 35.3
BolC9t56581H Brassica oleracea HOM05D004489 ORTHO05D032456 3.7e-07 58.5 102 35.3
Nn7g36442 Nelumbo nucifera HOM05D002739 ORTHO05D002877 4.8e-07 58.2 87 28.7
Nn7g36457 Nelumbo nucifera HOM05D002739 ORTHO05D002877 4.8e-07 58.2 87 28.7
Nn7g38448 Nelumbo nucifera HOM05D002739 ORTHO05D002877 4.8e-07 58.2 87 28.7
SMO236G0083 Selaginella moellendorffii HOM05D038626 ORTHO05D379396 4.8e-07 58.2 81 38.3
SMO187G0001 Selaginella moellendorffii HOM05D038626 ORTHO05D374465 1.1e-06 57.0 79 39.2
BcaC04g20961 Brassica carinata HOM05D004489 ORTHO05D032456 1.4e-06 56.6 101 34.7
QL01p017875 Quercus lobata HOM05D002739 ORTHO05D002877 1.4e-06 56.6 110 30.0
RcHm_v2.0_Chr7g0218541 Rosa chinensis HOM05D002739 ORTHO05D002877 1.8e-06 56.2 86 33.7
PSO339G6632 Papaver somniferum HOM05D002739 ORTHO05D002877 2.4e-06 55.8 105 32.4
FvH4_3g29300 Fragaria vesca HOM05D002739 ORTHO05D002877 3.1e-06 55.5 106 29.2
Sabra01G0017600 Salix brachista HOM05D002739 ORTHO05D002877 4.1e-06 55.1 83 31.3
Aa31sc407G10 Aethionema arabicum HOM05D002739 ORTHO05D002877 7.0e-06 54.3 57 38.6
Nn2g15046 Nelumbo nucifera HOM05D002739 ORTHO05D002877 7.0e-06 54.3 87 32.2
PSO339G0568 Papaver somniferum HOM05D002739 ORTHO05D002877 7.0e-06 54.3 81 27.2
PSO384G1774 Papaver somniferum HOM05D002739 ORTHO05D002877 7.0e-06 54.3 106 33.0
PSO384G3657 Papaver somniferum HOM05D002739 ORTHO05D002877 7.0e-06 54.3 106 33.0
Dinv34529 Davidia involucrata HOM05D004409 ORTHO05D005292 9.1e-06 53.9 36 61.1
PSO384G1879 Papaver somniferum HOM05D002739 ORTHO05D002877 9.1e-06 53.9 86 29.1


User provided reference genes

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