Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1136G126 Amborella trichopoda HOM05D004255 ORTHO05D004815 1.8e-76 291.2 189 100.0
MBI19_g30280_MAGBIO Magnolia biondii HOM05D004255 ORTHO05D004815 1.0e-10 72.8 105 42.9
Dinv37304 Davidia involucrata HOM05D004255 ORTHO05D004815 1.8e-10 72.0 109 38.5
CSS0008426 Camellia sinensis var. sinensis HOM05D004255 ORTHO05D004815 1.6e-08 65.5 106 34.0
TAR633G1109 Trochodendron aralioides HOM05D004255 ORTHO05D004815 2.8e-08 64.7 102 41.2
AUR62040455 Chenopodium quinoa HOM05D004255 ORTHO05D004815 3.7e-08 64.3 106 36.8
Peaxi162Scf00311g00013 Petunia axillaris HOM05D004255 ORTHO05D004815 3.7e-08 64.3 110 38.2
AUR62041993 Chenopodium quinoa HOM05D004255 ORTHO05D004815 4.8e-08 63.9 105 37.1
QL07p044001 Quercus lobata HOM05D004255 ORTHO05D004815 4.8e-08 63.9 102 37.3
Nn2g11560 Nelumbo nucifera HOM05D004255 ORTHO05D004815 8.2e-08 63.2 107 36.4
Nitab4.5_0001297g0100 Nicotiana tabacum HOM05D004255 ORTHO05D004815 8.2e-08 63.2 108 37.0
TAR633G0618 Trochodendron aralioides HOM05D004255 ORTHO05D004815 1.1e-07 62.8 98 41.8
TAR633G2036 Trochodendron aralioides HOM05D004255 ORTHO05D004815 1.1e-07 62.8 100 41.0
Potri.003G008900 Populus trichocarpa HOM05D004255 ORTHO05D004815 1.4e-07 62.4 98 35.7
SGA_v2.0_scaffold75G24836 Striga asiatica HOM05D004255 ORTHO05D004815 3.1e-07 61.2 108 31.5
Rhsim07G0183700 Rhododendron simsii HOM05D004255 ORTHO05D004815 4.1e-07 60.8 100 35.0
GSVIVG01025719001 Vitis vinifera HOM05D004255 ORTHO05D004815 5.3e-07 60.5 123 34.1
Atru.chr8.1831 Acer truncatum HOM05D004255 ORTHO05D004815 9.0e-07 59.7 106 34.9
TWI75G0856 Tripterygium wilfordii HOM05D004255 ORTHO05D004815 1.2e-06 59.3 104 33.7
Duzib170G0445 Durio zibethinus HOM05D004255 ORTHO05D004815 1.5e-06 58.9 111 32.4
Rhsim02G0187700 Rhododendron simsii HOM05D004255 ORTHO05D004815 1.5e-06 58.9 95 35.8
Nitab4.5_0005518g0020 Nicotiana tabacum HOM05D004255 ORTHO05D004815 2.6e-06 58.2 105 36.2
CiPaw.09G173800 Carya illinoinensis HOM05D004255 ORTHO05D004815 3.4e-06 57.8 111 33.3
Gohir.D09G143800 Gossypium hirsutum HOM05D004255 ORTHO05D004815 3.4e-06 57.8 105 36.2
Gorai.006G165100 Gossypium raimondii HOM05D004255 ORTHO05D004815 3.4e-06 57.8 105 36.2
Hma1.2p1_0297F.1_g117010 Hydrangea macrophylla HOM05D004255 ORTHO05D004815 3.4e-06 57.8 101 32.7
Cc06_g04130 Coffea canephora HOM05D004255 ORTHO05D004815 4.5e-06 57.4 108 34.3
DCAR_014992 Daucus carota HOM05D004255 ORTHO05D004815 4.5e-06 57.4 102 32.4
Lj1A198G34 Lonicera japonica HOM05D004255 ORTHO05D004815 4.5e-06 57.4 97 35.1
Solyc10g084090.3 Solanum lycopersicum HOM05D004255 ORTHO05D004815 4.5e-06 57.4 107 33.6
Sopen10g033550 Solanum pennellii HOM05D004255 ORTHO05D004815 4.5e-06 57.4 107 33.6
CDE02G3824 Ceratophyllum demersum HOM05D004255 ORTHO05D004815 5.9e-06 57.0 98 36.7
Thecc.09G346900 Theobroma cacao HOM05D004255 ORTHO05D004815 5.9e-06 57.0 111 32.4
Rhsim04G0144500 Rhododendron simsii HOM05D004255 ORTHO05D004815 7.6e-06 56.6 95 35.8
Cfa017586 Carpinus fangiana HOM05D004255 ORTHO05D004815 1.0e-05 56.2 102 34.3
Gorai.009G110100 Gossypium raimondii HOM05D004255 ORTHO05D004815 1.0e-05 56.2 101 32.7


User provided reference genes

Program Settings