Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1136G020 Amborella trichopoda HOM05D005878 ORTHO05D007433 1.4e-114 416.4 224 100.0
MBI03_g46805_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 4.3e-71 271.9 190 75.3
MBI03_g45113_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 7.3e-71 271.2 190 75.3
TWI15G0528 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 7.5e-68 261.2 186 71.5
Nn7g36933 Nelumbo nucifera HOM05D005878 ORTHO05D007433 9.8e-68 260.8 226 61.1
Aqoxy2G00498 Aquilegia oxysepala HOM05D005878 ORTHO05D007433 2.9e-67 259.2 199 66.3
TWI38G1150 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 2.4e-66 256.1 188 68.1
TAR633G2731 Trochodendron aralioides HOM05D005878 ORTHO05D007433 1.6e-65 253.4 230 57.0
TAR636G2836 Trochodendron aralioides HOM05D005878 ORTHO05D007433 1.0e-64 250.8 189 67.7
arahy.Tifrunner.gnm1.ann1.7Y8XE1 Arachis hypogaea HOM05D005878 ORTHO05D007433 2.3e-64 249.6 191 69.1
Hund13399 Selenicereus undatus HOM05D005878 ORTHO05D007433 5.1e-64 248.4 237 57.4
arahy.Tifrunner.gnm1.ann1.RJ91AH Arachis hypogaea HOM05D005878 ORTHO05D007433 3.3e-63 245.7 191 68.6
Duzib114G0830 Durio zibethinus HOM05D005878 ORTHO05D007433 4.3e-63 245.4 222 56.3
Glyma.06G309000 Glycine max HOM05D005878 ORTHO05D007433 9.5e-63 244.2 189 68.3
Lalb_Chr01g0007451 Lupinus albus HOM05D005878 ORTHO05D007433 2.8e-62 242.7 191 68.1
Thecc.10G140600 Theobroma cacao HOM05D005878 ORTHO05D007433 3.6e-62 242.3 223 55.6
Glyma.04G132400 Glycine max HOM05D005878 ORTHO05D007433 6.2e-62 241.5 189 67.7
Medtr3g013460 Medicago truncatula HOM05D005878 ORTHO05D007433 4.0e-61 238.8 191 68.1
CiPaw.14G010200 Carya illinoinensis HOM05D005878 ORTHO05D007433 6.8e-61 238.0 197 64.5
Dinv02557 Davidia involucrata HOM05D005878 ORTHO05D007433 6.8e-61 238.0 190 65.3
Gorai.012G019700 Gossypium raimondii HOM05D005878 ORTHO05D007433 6.8e-61 238.0 228 54.8
PSO339G1146 Papaver somniferum HOM05D005878 ORTHO05D007433 8.9e-61 237.7 185 63.2
QL04p021553 Quercus lobata HOM05D005878 ORTHO05D007433 8.9e-61 237.7 166 71.1
Ciclev10002378m.g Citrus clementina HOM05D005878 ORTHO05D007433 1.5e-60 236.9 226 57.1
Gohir.A05G398900 Gossypium hirsutum HOM05D005878 ORTHO05D007433 2.0e-60 236.5 228 54.4
Gohir.D04G017000 Gossypium hirsutum HOM05D005878 ORTHO05D007433 2.0e-60 236.5 228 54.4
ClCG05G027000 Citrullus lanatus HOM05D005878 ORTHO05D007433 2.6e-60 236.1 189 65.6
Nitab4.5_0002838g0030 Nicotiana tabacum HOM05D005878 ORTHO05D007433 2.6e-60 236.1 174 68.4
PGR031G0581 Punica granatum HOM05D005878 ORTHO05D007433 2.6e-60 236.1 219 58.4
COL.COLO4_05616 Corchorus olitorius HOM05D005878 ORTHO05D007433 3.4e-60 235.7 230 55.7
Cfa010961 Carpinus fangiana HOM05D005878 ORTHO05D007433 4.4e-60 235.3 173 71.1
PSO384G4469 Papaver somniferum HOM05D005878 ORTHO05D007433 4.4e-60 235.3 185 63.8
EL10Ac2g02748 Beta vulgaris HOM05D005878 ORTHO05D007433 5.8e-60 235.0 190 62.6
Ca_14245_v3 Cicer arietinum L. HOM05D005878 ORTHO05D007433 7.6e-60 234.6 155 78.1
CsaV3_5G036960 Cucumis sativus L. HOM05D005878 ORTHO05D007433 9.9e-60 234.2 189 64.0
Dinv32002 Davidia involucrata HOM05D005878 ORTHO05D007433 9.9e-60 234.2 190 65.8
Phvul.005G018300 Phaseolus vulgaris HOM05D005878 ORTHO05D007433 2.2e-59 233.0 217 59.9
Sed0004070 Sechium edule HOM05D005878 ORTHO05D007433 2.2e-59 233.0 189 66.1
Actinidia01690 Actinidia chinensis HOM05D005878 ORTHO05D007433 2.9e-59 232.6 193 63.7
Nitab4.5_0004168g0090 Nicotiana tabacum HOM05D005878 ORTHO05D007433 2.9e-59 232.6 193 63.2
MELO3C012494.2 Cucumis melo HOM05D005878 ORTHO05D007433 3.7e-59 232.3 203 61.1
THA.LOC104799332 Tarenaya hassleriana HOM05D005878 ORTHO05D007433 3.7e-59 232.3 227 57.7
Manes.11G008200 Manihot esculenta HOM05D005878 ORTHO05D007433 4.9e-59 231.9 199 64.3
VMungo1080G0593 Vigna mungo HOM05D005878 ORTHO05D007433 4.9e-59 231.9 189 65.6
Peaxi162Scf00220g00235 Petunia axillaris HOM05D005878 ORTHO05D007433 1.1e-58 230.7 213 58.2
Prupe.2G044200 Prunus persica HOM05D005878 ORTHO05D007433 1.4e-58 230.3 186 66.1
BcaB05g21633 Brassica carinata HOM05D005878 ORTHO05D007433 3.2e-58 229.2 224 54.5
Eucgr.G03205 Eucalyptus grandis HOM05D005878 ORTHO05D007433 3.2e-58 229.2 163 72.4
BcaC06g32524 Brassica carinata HOM05D005878 ORTHO05D007433 4.1e-58 228.8 205 60.0
AUR62032609 Chenopodium quinoa HOM05D005878 ORTHO05D007433 4.1e-58 228.8 171 67.8
FAN01G0732 Fragaria x ananassa HOM05D005878 ORTHO05D007433 4.1e-58 228.8 219 58.9
Solyc01g096660.3 Solanum lycopersicum HOM05D005878 ORTHO05D007433 5.4e-58 228.4 171 69.6
Rhsim10G0180100 Rhododendron simsii HOM05D005878 ORTHO05D007433 7.1e-58 228.0 183 68.3
Migut.B01182 Erythranthe guttata HOM05D005878 ORTHO05D007433 1.2e-57 227.3 172 66.3
CANSAT01G2833 Cannabis sativa HOM05D005878 ORTHO05D007433 1.6e-57 226.9 203 59.1
RcHm_v2.0_Chr1g0327631 Rosa chinensis HOM05D005878 ORTHO05D007433 1.6e-57 226.9 202 62.9
PGSC0003DMG400003288 Solanum tuberosum HOM05D005878 ORTHO05D007433 1.6e-57 226.9 200 61.0
Sopen01g040380 Solanum pennellii HOM05D005878 ORTHO05D007433 2.1e-57 226.5 171 68.4
BraA10t44928Z Brassica rapa HOM05D005878 ORTHO05D007433 4.6e-57 225.3 225 54.7
BcaB05g21635 Brassica carinata HOM05D005878 ORTHO05D007433 6.0e-57 224.9 200 59.5
BcaC03g13174 Brassica carinata HOM05D005878 ORTHO05D007433 6.0e-57 224.9 200 59.5
BolC2t06258H Brassica oleracea HOM05D005878 ORTHO05D007433 6.0e-57 224.9 200 59.5
BcaNung04204 Brassica carinata HOM05D005878 ORTHO05D007433 1.0e-56 224.2 223 55.6
A10p28810 Brassica napus HOM05D005878 ORTHO05D007433 1.0e-56 224.2 225 54.2
C09p69150 Brassica napus HOM05D005878 ORTHO05D007433 1.0e-56 224.2 223 55.6
FAN06G2676 Fragaria x ananassa HOM05D005878 ORTHO05D007433 1.0e-56 224.2 232 55.2
Actinidia01520 Actinidia chinensis HOM05D005878 ORTHO05D007433 1.3e-56 223.8 156 71.2
C02p02970 Brassica napus HOM05D005878 ORTHO05D007433 1.3e-56 223.8 224 54.9
Lj3g0011478 Lotus japonicus HOM05D005878 ORTHO05D007433 1.3e-56 223.8 189 64.0
BolC9t59659H Brassica oleracea HOM05D005878 ORTHO05D007433 1.7e-56 223.4 223 55.6
AL6G17170 Arabidopsis lyrata HOM05D005878 ORTHO05D007433 3.9e-56 222.2 195 62.1
AT5G07020 Arabidopsis thaliana HOM05D005878 ORTHO05D007433 5.1e-56 221.9 185 62.7
CARHR206130 Cardamine hirsuta HOM05D005878 ORTHO05D007433 5.1e-56 221.9 184 62.0
Sp6g35860 Schrenkiella parvula HOM05D005878 ORTHO05D007433 6.6e-56 221.5 185 61.1
CSS0046372 Camellia sinensis var. sinensis HOM05D005878 ORTHO05D007433 8.6e-56 221.1 152 71.1
Cc00_g09800 Coffea canephora HOM05D005878 ORTHO05D007433 8.6e-56 221.1 197 58.9
FvH4_7g03940 Fragaria vesca HOM05D005878 ORTHO05D007433 8.6e-56 221.1 186 63.4
SalBow2G2419 Salvia bowleyana HOM05D005878 ORTHO05D007433 8.6e-56 221.1 175 65.1
Carub.0006s0594 Capsella rubella HOM05D005878 ORTHO05D007433 1.1e-55 220.7 185 63.8
ECA248G2695 Erigeron canadensis HOM05D005878 ORTHO05D007433 1.1e-55 220.7 223 55.2
Thhalv10014567m.g Eutrema salsugineum HOM05D005878 ORTHO05D007433 1.5e-55 220.3 199 59.8
SalBow2G0433 Salvia bowleyana HOM05D005878 ORTHO05D007433 1.5e-55 220.3 144 73.6
MSTRG.16973 Avicennia marina HOM05D005878 ORTHO05D007433 1.9e-55 219.9 156 70.5
MD00G1152600 Malus domestica HOM05D005878 ORTHO05D007433 1.9e-55 219.9 191 61.8
Haze_02979 Corylus avellana HOM05D005878 ORTHO05D007433 3.3e-55 219.2 191 62.8
Lsat_1_v5_gn_9_74980 Lactuca sativa HOM05D005878 ORTHO05D007433 3.3e-55 219.2 229 56.3
DCAR_006594 Daucus carota HOM05D005878 ORTHO05D007433 4.3e-55 218.8 206 56.8
CDE02G0435 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 7.3e-55 218.0 187 61.0
MD07G1043600 Malus domestica HOM05D005878 ORTHO05D007433 2.8e-54 216.1 183 61.7
Sc14g0005230 Simmondsia chinensis HOM05D005878 ORTHO05D007433 3.6e-54 215.7 227 55.5
CDE08G0208 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 8.1e-54 214.5 224 52.7
Potri.003G192800 Populus trichocarpa HOM05D005878 ORTHO05D007433 1.4e-53 213.8 189 61.9
unitig_22.g5332 Utricularia gibba HOM05D005878 ORTHO05D007433 2.4e-53 213.0 196 58.7
HanXRQChr11g0341301 Helianthus annuus HOM05D005878 ORTHO05D007433 5.8e-52 208.4 192 60.4
GSVIVG01036595001 Vitis vinifera HOM05D005878 ORTHO05D007433 9.9e-52 207.6 189 59.8
HPP92_016121 Vanilla planifolia HOM05D005878 ORTHO05D007433 2.9e-51 206.1 204 54.9
Oeu006783.1 Olea europaea HOM05D005878 ORTHO05D007433 6.4e-51 204.9 213 55.4
BraA02t04902Z Brassica rapa HOM05D005878 ORTHO05D007433 1.4e-50 203.8 234 50.4
vmacro20585 Vaccinium macrocarpon HOM05D005878 ORTHO05D007433 1.9e-50 203.4 205 56.1
Aa31sc25G160 Aethionema arabicum HOM05D005878 ORTHO05D007433 1.0e-48 197.6 140 69.3
SEGI_13955 Sequoiadendron giganteum HOM05D005878 ORTHO05D007433 1.5e-47 193.7 156 62.8
AUR62001069 Chenopodium quinoa HOM05D005878 ORTHO05D007433 5.6e-47 191.8 131 74.0
FAN03G0529 Fragaria x ananassa HOM05D005878 ORTHO05D007433 1.6e-46 190.3 181 59.7
Os02g0556800 Oryza sativa ssp. japonica HOM05D005878 ORTHO05D007433 2.1e-46 189.9 152 63.2
Zm00001eb182020 Zea mays HOM05D005878 ORTHO05D007433 3.6e-46 189.1 142 65.5
Lj9A656G41 Lonicera japonica HOM05D005878 ORTHO05D007433 4.8e-46 188.7 165 61.2
TPR.G1450 Trifolium pratense HOM05D005878 ORTHO05D007433 6.2e-46 188.3 133 71.4
Hma1.2p1_0233F.1_g098360 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 1.4e-45 187.2 123 73.2
Cpa.g.sc188.4 Carica papaya HOM05D005878 ORTHO05D007433 9.9e-44 181.0 121 76.0
SGA_v2.0_scaffold430G51553 Striga asiatica HOM05D005878 ORTHO05D007433 4.2e-42 175.6 150 60.0
AagrBONN_evm.TU.Sc2ySwM_117.1283 Anthoceros agrestis HOM05D005878 ORTHO05D007433 1.2e-41 174.1 153 56.9
Atru.chr12.1246 Acer truncatum HOM05D005878 ORTHO05D007433 1.6e-41 173.7 216 52.3
AagrBONN_evm.TU.Sc2ySwM_117.450 Anthoceros agrestis HOM05D005878 ORTHO05D007433 6.0e-41 171.8 160 51.2
Psat5g223120 Pisum sativum HOM05D005878 ORTHO05D007433 6.0e-41 171.8 191 53.9
Mapoly0116s0014 Marchantia polymorpha HOM05D005878 ORTHO05D007433 6.6e-40 168.3 152 59.2
Pp3c8_5370 Physcomitrium patens HOM05D005878 ORTHO05D007433 2.8e-38 162.9 155 53.5
Hma1.2p1_0233F.1_g098370 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 3.6e-38 162.5 138 60.1
A03p56860 Brassica napus HOM05D005878 ORTHO05D007433 6.9e-37 158.3 132 64.4
Pp3c3_32790 Physcomitrium patens HOM05D005878 ORTHO05D007433 1.2e-36 157.5 152 53.3
SMO143G0125 Selaginella moellendorffii HOM05D005878 ORTHO05D007433 2.0e-36 156.8 150 56.7
AUR62031722 Chenopodium quinoa HOM05D005878 ORTHO05D007433 2.2e-27 126.7 164 48.8
BcaC03g13176 Brassica carinata HOM05D005878 ORTHO05D007433 1.8e-24 117.1 104 55.8
TAR628G0990 Trochodendron aralioides HOM05D005878 ORTHO05D007433 3.0e-24 116.3 167 46.7
Eucgr.L03611 Eucalyptus grandis HOM05D005878 ORTHO05D007433 3.9e-24 115.9 68 80.9
CBR_g50344 Chara braunii HOM05D005878 ORTHO05D007433 1.1e-18 97.8 133 43.6
Atru.chr2.3038 Acer truncatum HOM05D005878 ORTHO05D007433 1.4e-18 97.4 100 55.0
Atru.chr3.2623 Acer truncatum HOM05D005878 ORTHO05D007433 3.1e-13 79.7 87 50.6
Atru.chr7.1915 Acer truncatum HOM05D005878 ORTHO05D007433 6.9e-13 78.6 110 41.8
PGSC0003DMG400040390 Solanum tuberosum HOM05D005878 ORTHO05D007433 1.9e-10 70.5 52 71.2
Potri.001G032200 Populus trichocarpa HOM05D005878 ORTHO05D007433 4.2e-10 69.3 203 31.0


User provided reference genes

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