Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1134G106 Amborella trichopoda HOM05D007065 ORTHO05D008960 1.4e-82 309.7 170 100.0
PSO339G2565 Papaver somniferum HOM05D007065 ORTHO05D008960 2.5e-31 139.4 173 50.9
Dinv05022 Davidia involucrata HOM05D007065 ORTHO05D008960 8.1e-30 134.4 172 51.7
PSO384G3763 Papaver somniferum HOM05D007065 ORTHO05D008960 8.1e-30 134.4 171 50.3
GSVIVG01001464001 Vitis vinifera HOM05D007065 ORTHO05D008960 8.1e-30 134.4 161 52.2
Nn2g15140 Nelumbo nucifera HOM05D007065 ORTHO05D008960 1.1e-29 134.0 164 51.8
QL04p012215 Quercus lobata HOM05D007065 ORTHO05D008960 1.4e-29 133.7 169 55.6
MD07G1026200 Malus domestica HOM05D007065 ORTHO05D008960 3.1e-29 132.5 168 48.8
MBI13_g15309_MAGBIO Magnolia biondii HOM05D007065 ORTHO05D008960 5.2e-29 131.7 164 54.9
Lalb_Chr04g0263741 Lupinus albus HOM05D007065 ORTHO05D008960 2.0e-28 129.8 174 46.6
Aqoxy1G00221 Aquilegia oxysepala HOM05D007065 ORTHO05D008960 5.8e-28 128.3 165 52.1
MD02G1298000 Malus domestica HOM05D007065 ORTHO05D008960 5.8e-28 128.3 162 50.6
FvH4_7g02000 Fragaria vesca HOM05D007065 ORTHO05D008960 7.6e-28 127.9 164 50.0
Manes.04G064100 Manihot esculenta HOM05D007065 ORTHO05D008960 1.7e-27 126.7 168 48.2
MSTRG.20552 Avicennia marina HOM05D007065 ORTHO05D008960 2.2e-27 126.3 181 48.1
Actinidia19434 Actinidia chinensis HOM05D007065 ORTHO05D008960 3.8e-27 125.6 170 54.7
CiPaw.13G009300 Carya illinoinensis HOM05D007065 ORTHO05D008960 3.8e-27 125.6 173 49.1
Glyma.11G157140 Glycine max HOM05D007065 ORTHO05D008960 3.8e-27 125.6 163 51.5
Medtr3g436080 Medicago truncatula HOM05D007065 ORTHO05D008960 3.8e-27 125.6 166 51.2
RcHm_v2.0_Chr1g0318991 Rosa chinensis HOM05D007065 ORTHO05D008960 4.9e-27 125.2 163 52.1
Solyc01g088140.3 Solanum lycopersicum HOM05D007065 ORTHO05D008960 4.9e-27 125.2 173 47.4
FAN06G0835 Fragaria x ananassa HOM05D007065 ORTHO05D008960 6.4e-27 124.8 162 48.8
FAN01G0916 Fragaria x ananassa HOM05D007065 ORTHO05D008960 8.4e-27 124.4 163 48.5
Psat5g211000 Pisum sativum HOM05D007065 ORTHO05D008960 8.4e-27 124.4 135 51.9
Sopen01g035020 Solanum pennellii HOM05D007065 ORTHO05D008960 2.4e-26 122.9 173 46.8
Actinidia06280 Actinidia chinensis HOM05D007065 ORTHO05D008960 4.1e-26 122.1 166 51.2
Sc10g0004180 Simmondsia chinensis HOM05D007065 ORTHO05D008960 5.4e-26 121.7 104 67.3
AT5G13470 Arabidopsis thaliana HOM05D007065 ORTHO05D008960 7.1e-26 121.3 165 49.1
MSTRG.17000 Avicennia marina HOM05D007065 ORTHO05D008960 1.2e-25 120.6 187 47.6
EL10Ac2g02888 Beta vulgaris HOM05D007065 ORTHO05D008960 3.5e-25 119.0 168 50.0
MELO3C005114.2 Cucumis melo HOM05D007065 ORTHO05D008960 3.5e-25 119.0 169 49.7
Lj3g0026300 Lotus japonicus HOM05D007065 ORTHO05D008960 4.6e-25 118.6 171 45.6
SGA_v2.0_scaffold4G02459 Striga asiatica HOM05D007065 ORTHO05D008960 6.0e-25 118.2 179 48.0
PGSC0003DMG400006766 Solanum tuberosum HOM05D007065 ORTHO05D008960 7.8e-25 117.9 173 45.7
Aa31LG11G7640 Aethionema arabicum HOM05D007065 ORTHO05D008960 1.0e-24 117.5 169 46.2
Ca_14187_v3 Cicer arietinum L. HOM05D007065 ORTHO05D008960 1.0e-24 117.5 167 49.7
unitig_22.g5430 Utricularia gibba HOM05D007065 ORTHO05D008960 1.0e-24 117.5 182 46.7
ECA248G1453 Erigeron canadensis HOM05D007065 ORTHO05D008960 1.3e-24 117.1 164 47.6
HanXRQChr01g0020971 Helianthus annuus HOM05D007065 ORTHO05D008960 1.3e-24 117.1 172 47.1
Sp6g30550 Schrenkiella parvula HOM05D007065 ORTHO05D008960 1.7e-24 116.7 167 49.7
Carub.0006s1163 Capsella rubella HOM05D007065 ORTHO05D008960 2.3e-24 116.3 165 46.7
CsaV3_5G024860 Cucumis sativus L. HOM05D007065 ORTHO05D008960 3.0e-24 115.9 169 49.1
Phvul.005G034300 Phaseolus vulgaris HOM05D007065 ORTHO05D008960 3.0e-24 115.9 164 50.6
SalBow5G0133 Salvia bowleyana HOM05D007065 ORTHO05D008960 3.9e-24 115.5 160 47.5
AL6G24090 Arabidopsis lyrata HOM05D007065 ORTHO05D008960 5.1e-24 115.2 169 45.0
Cfa010837 Carpinus fangiana HOM05D007065 ORTHO05D008960 5.1e-24 115.2 175 46.9
AUR62037250 Chenopodium quinoa HOM05D007065 ORTHO05D008960 5.1e-24 115.2 130 54.6
Hund13309 Selenicereus undatus HOM05D007065 ORTHO05D008960 8.6e-24 114.4 98 68.4
Peaxi162Scf01115g00110 Petunia axillaris HOM05D007065 ORTHO05D008960 1.1e-23 114.0 173 45.7
SalBow5G3075 Salvia bowleyana HOM05D007065 ORTHO05D008960 1.5e-23 113.6 160 46.9
BolC9t59205H Brassica oleracea HOM05D007065 ORTHO05D008960 1.9e-23 113.2 163 46.0
BraA10t44543Z Brassica rapa HOM05D007065 ORTHO05D008960 1.9e-23 113.2 163 46.6
AUR62030541 Chenopodium quinoa HOM05D007065 ORTHO05D008960 1.9e-23 113.2 108 62.0
Lsat_1_v5_gn_1_99921 Lactuca sativa HOM05D007065 ORTHO05D008960 5.6e-23 111.7 163 47.2
Nitab4.5_0000316g0330 Nicotiana tabacum HOM05D007065 ORTHO05D008960 5.6e-23 111.7 174 46.0
A10p24790 Brassica napus HOM05D007065 ORTHO05D008960 7.3e-23 111.3 163 45.4
Eucgr.G03272 Eucalyptus grandis HOM05D007065 ORTHO05D008960 7.3e-23 111.3 172 46.5
PGR031G2384 Punica granatum HOM05D007065 ORTHO05D008960 7.3e-23 111.3 183 44.8
Rhsim07G0061200 Rhododendron simsii HOM05D007065 ORTHO05D008960 9.6e-23 110.9 185 43.8
ClCG01G007790 Citrullus lanatus HOM05D007065 ORTHO05D008960 2.1e-22 109.8 167 46.7
Oeu027356.1 Olea europaea HOM05D007065 ORTHO05D008960 3.6e-22 109.0 96 62.5
Cc02_g30050 Coffea canephora HOM05D007065 ORTHO05D008960 4.7e-22 108.6 185 45.9
AagrBONN_evm.TU.Sc2ySwM_228.825 Anthoceros agrestis HOM05D007065 ORTHO05D008960 8.1e-22 107.8 163 46.6
THA.LOC104819111 Tarenaya hassleriana HOM05D007065 ORTHO05D008960 8.1e-22 107.8 166 45.2
C09p63610 Brassica napus HOM05D007065 ORTHO05D008960 1.1e-21 107.5 100 62.0
arahy.Tifrunner.gnm1.ann1.D1ESAM Arachis hypogaea HOM05D007065 ORTHO05D008960 3.1e-21 105.9 162 43.2
Duzib128G1478 Durio zibethinus HOM05D007065 ORTHO05D008960 6.9e-21 104.8 170 45.9
Migut.B01254 Erythranthe guttata HOM05D007065 ORTHO05D008960 8.9e-21 104.4 181 42.5
DCAR_022363 Daucus carota HOM05D007065 ORTHO05D008960 1.5e-20 103.6 179 43.0
TAR636G1654 Trochodendron aralioides HOM05D007065 ORTHO05D008960 2.0e-20 103.2 89 65.2
FAN03G0341 Fragaria x ananassa HOM05D007065 ORTHO05D008960 2.6e-20 102.8 152 46.7
COL.COLO4_19334 Corchorus olitorius HOM05D002616 ORTHO05D003192 3.4e-20 102.4 116 53.4
Peaxi162Scf01115g00011 Petunia axillaris HOM05D007065 ORTHO05D008960 7.6e-20 101.3 106 57.5
Potri.003G203900 Populus trichocarpa HOM05D007065 ORTHO05D008960 9.9e-20 100.9 173 46.2
Nitab4.5_0016351g0020 Nicotiana tabacum HOM05D007065 ORTHO05D008960 1.7e-19 100.1 105 56.2
arahy.Tifrunner.gnm1.ann1.ZUZF0V Arachis hypogaea HOM05D007065 ORTHO05D008960 2.9e-19 99.4 155 40.6
Sed0022285 Sechium edule HOM05D007065 ORTHO05D008960 3.8e-19 99.0 168 44.6
A02p01960 Brassica napus HOM05D007065 ORTHO05D008960 4.9e-19 98.6 174 42.5
C02p06180 Brassica napus HOM05D007065 ORTHO05D008960 6.4e-19 98.2 174 42.5
BolC2t06559H Brassica oleracea HOM05D007065 ORTHO05D008960 6.4e-19 98.2 174 42.5
VMungo1080G1068 Vigna mungo HOM05D007065 ORTHO05D008960 6.4e-19 98.2 89 60.7
BcaNung01150 Brassica carinata HOM05D007065 ORTHO05D008960 1.4e-18 97.1 174 42.0
Hma1.2p1_0579F.1_g182650 Hydrangea macrophylla HOM05D007065 ORTHO05D008960 1.4e-18 97.1 147 48.3
Thecc.10G002700 Theobroma cacao HOM05D007065 ORTHO05D008960 1.4e-18 97.1 174 48.3
CDE07G0125 Ceratophyllum demersum HOM05D007065 ORTHO05D008960 1.9e-18 96.7 166 43.4
Potri.001G020700 Populus trichocarpa HOM05D007065 ORTHO05D008960 1.9e-18 96.7 174 47.7
TPR.G15470 Trifolium pratense HOM05D007065 ORTHO05D008960 4.2e-18 95.5 89 57.3
HPP92_001654 Vanilla planifolia HOM05D007065 ORTHO05D008960 9.3e-18 94.4 184 40.8
BraA02t05169Z Brassica rapa HOM05D007065 ORTHO05D008960 1.2e-17 94.0 174 41.4
CDE04G3117 Ceratophyllum demersum HOM05D007065 ORTHO05D008960 1.2e-17 94.0 167 42.5
Dinv32064 Davidia involucrata HOM05D007065 ORTHO05D008960 2.7e-17 92.8 146 50.0
Oeu049459.1 Olea europaea HOM05D007065 ORTHO05D008960 3.5e-17 92.4 103 54.4
vmacro13712 Vaccinium macrocarpon HOM05D007065 ORTHO05D008960 3.5e-17 92.4 152 46.7
Sabra01G0015300 Salix brachista HOM05D007065 ORTHO05D008960 4.6e-17 92.0 167 49.1
BcaNung01886 Brassica carinata HOM05D007065 ORTHO05D002715 7.8e-17 91.3 144 44.4
Cpa.g.sc197.20 Carica papaya HOM05D007065 ORTHO05D008960 7.8e-17 91.3 158 44.3
Mapoly0014s0118 Marchantia polymorpha HOM05D007065 ORTHO05D008960 7.8e-17 91.3 166 42.8
Thhalv10014938m.g Eutrema salsugineum HOM05D007065 ORTHO05D008960 1.0e-16 90.9 157 42.7
Duzib114G0680 Durio zibethinus HOM05D007065 ORTHO05D008960 1.3e-16 90.5 173 41.6
FAN28G1096 Fragaria x ananassa HOM05D007065 ORTHO05D008960 1.3e-16 90.5 73 64.4
Haze_03101 Corylus avellana HOM05D007065 ORTHO05D008960 1.1e-15 87.4 135 46.7
Ah.12g065220 Amaranthus hybridus HOM05D007065 ORTHO05D008960 1.9e-15 86.7 160 41.9
Gohir.D13G013700 Gossypium hirsutum HOM05D007065 ORTHO05D008960 1.6e-14 83.6 82 57.3
Lj9P644T43 Lonicera japonica HOM05D007065 ORTHO05D008960 2.8e-14 82.8 85 60.0
Thecc.03G067800 Theobroma cacao HOM05D007065 ORTHO05D008960 1.5e-12 77.0 89 48.3
Os01g0939400 Oryza sativa ssp. japonica HOM05D007065 ORTHO05D008960 7.6e-12 74.7 98 48.0
CANSAT80G2361 Cannabis sativa HOM05D007065 ORTHO05D008960 1.3e-11 73.9 62 58.1
CSS0014876 Camellia sinensis var. sinensis HOM05D000388 ORTHO05D000473 1.4e-10 70.5 78 56.4
TWI09G1481 Tripterygium wilfordii HOM05D007065 ORTHO05D008960 1.9e-10 70.1 114 41.2
CBR_g4751 Chara braunii HOM05D007065 ORTHO05D008960 2.1e-09 66.6 82 50.0
Pp3c19_1440 Physcomitrium patens HOM05D007065 ORTHO05D008960 1.3e-08 63.9 74 52.7
Gohir.A13G012500 Gossypium hirsutum HOM05D007065 ORTHO05D008960 8.7e-08 61.2 85 48.2
Zm00001eb141670 Zea mays HOM05D007065 ORTHO05D008960 1.1e-07 60.8 130 36.9
Gorai.013G014700 Gossypium raimondii HOM05D007065 ORTHO05D008960 9.6e-07 57.8 85 47.1


User provided reference genes

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