Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1132G028 Amborella trichopoda HOM05D004438 ORTHO05D005256 1.8e-69 265.8 129 100.0
Cc10_g15830 Coffea canephora HOM05D004438 ORTHO05D005256 4.4e-52 208.0 126 79.4
PSO675G7198 Papaver somniferum HOM05D004438 ORTHO05D005256 1.1e-50 203.4 126 78.6
Haze_25054 Corylus avellana HOM05D004438 ORTHO05D005256 1.8e-50 202.6 126 78.6
Prupe.4G171500 Prunus persica HOM05D004438 ORTHO05D005256 1.8e-50 202.6 128 80.5
Cpa.g.sc21.8 Carica papaya HOM05D004438 ORTHO05D005256 2.4e-50 202.2 128 78.1
DCAR_009568 Daucus carota HOM05D004438 ORTHO05D005256 2.4e-50 202.2 128 75.0
PSO541G1989 Papaver somniferum HOM05D004438 ORTHO05D005256 2.4e-50 202.2 126 78.6
Cfa002762 Carpinus fangiana HOM05D004438 ORTHO05D005256 4.1e-50 201.4 126 77.8
Nitab4.5_0000131g0360 Nicotiana tabacum HOM05D004438 ORTHO05D005256 4.1e-50 201.4 126 75.4
TWI53G0984 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 4.1e-50 201.4 126 77.8
Nitab4.5_0003709g0100 Nicotiana tabacum HOM05D004438 ORTHO05D005256 9.1e-50 200.3 126 74.6
AUR62027160 Chenopodium quinoa HOM05D004438 ORTHO05D005256 1.2e-49 199.9 126 77.0
AUR62044399 Chenopodium quinoa HOM05D004438 ORTHO05D005256 1.2e-49 199.9 126 77.0
DCAR_009565 Daucus carota HOM05D004438 ORTHO05D005256 1.6e-49 199.5 128 74.2
MD03G1238400 Malus domestica HOM05D004438 ORTHO05D005256 1.6e-49 199.5 128 79.7
RcHm_v2.0_Chr2g0117091 Rosa chinensis HOM05D004438 ORTHO05D005256 1.6e-49 199.5 128 78.9
MD15G1340400 Malus domestica HOM05D004438 ORTHO05D005256 2.0e-49 199.1 128 78.9
THA.LOC104799304 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 2.0e-49 199.1 128 75.0
CARHR278820 Cardamine hirsuta HOM05D004438 ORTHO05D005256 2.6e-49 198.7 128 75.0
Phvul.L002244 Phaseolus vulgaris HOM05D004438 ORTHO05D005256 2.6e-49 198.7 128 76.6
Rhsim10G0149000 Rhododendron simsii HOM05D004438 ORTHO05D005256 2.6e-49 198.7 126 76.2
VMungo0720G0202 Vigna mungo HOM05D004438 ORTHO05D005256 2.6e-49 198.7 128 76.6
COL.COLO4_11000 Corchorus olitorius HOM05D004438 ORTHO05D005256 3.5e-49 198.4 126 77.0
MBI11_g03707_MAGBIO Magnolia biondii HOM05D004438 ORTHO05D005256 3.5e-49 198.4 128 74.2
Eucgr.F02140 Eucalyptus grandis HOM05D004438 ORTHO05D005256 4.5e-49 198.0 126 75.4
Os03g0185600 Oryza sativa ssp. japonica HOM05D004438 ORTHO05D005256 4.5e-49 198.0 128 75.8
Carub.0008s2564 Capsella rubella HOM05D004438 ORTHO05D005256 5.9e-49 197.6 128 75.8
CAN.G475.35 Capsicum annuum HOM05D004438 ORTHO05D005256 5.9e-49 197.6 126 75.4
Gorai.007G245000 Gossypium raimondii HOM05D004438 ORTHO05D005256 5.9e-49 197.6 126 77.0
Lsat_1_v5_gn_8_150501 Lactuca sativa HOM05D004438 ORTHO05D005256 5.9e-49 197.6 126 75.4
Peaxi162Scf00979g00008 Petunia axillaris HOM05D004438 ORTHO05D005256 5.9e-49 197.6 126 73.8
Solyc04g051710.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 5.9e-49 197.6 128 74.2
Sopen04g023090 Solanum pennellii HOM05D004438 ORTHO05D005256 5.9e-49 197.6 128 74.2
PGSC0003DMG400031197 Solanum tuberosum HOM05D004438 ORTHO05D005256 5.9e-49 197.6 128 74.2
Peaxi162Scf00106g00162 Petunia axillaris HOM05D004438 ORTHO05D005256 7.7e-49 197.2 128 74.2
Actinidia06107 Actinidia chinensis HOM05D004438 ORTHO05D005256 1.0e-48 196.8 126 74.6
Ah.03g137490 Amaranthus hybridus HOM05D004438 ORTHO05D005256 1.0e-48 196.8 126 73.8
Solyc04g076260.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 1.0e-48 196.8 126 73.0
Sopen00g011470 Solanum pennellii HOM05D004438 ORTHO05D005256 1.0e-48 196.8 126 73.8
Duzib187G1770 Durio zibethinus HOM05D004438 ORTHO05D005256 1.3e-48 196.4 125 76.8
FvH4_1g22770 Fragaria vesca HOM05D004438 ORTHO05D005256 1.3e-48 196.4 126 78.6
FAN19G1036 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.3e-48 196.4 126 78.6
FAN23G1009 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.3e-48 196.4 126 78.6
FAN26G1829 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.3e-48 196.4 126 78.6
FAN28G0942 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.3e-48 196.4 126 78.6
Gohir.A11G197600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.3e-48 196.4 126 76.2
TPR.G28848 Trifolium pratense HOM05D004438 ORTHO05D005256 1.3e-48 196.4 128 75.8
TAR381G0625 Trochodendron aralioides HOM05D004438 ORTHO05D005256 1.3e-48 196.4 125 76.0
AL8G42290 Arabidopsis lyrata HOM05D004438 ORTHO05D005256 1.7e-48 196.1 128 75.0
AT5G64816 Arabidopsis thaliana HOM05D004438 ORTHO05D005256 1.7e-48 196.1 128 75.0
BcaB02g09832 Brassica carinata HOM05D004438 ORTHO05D005256 1.7e-48 196.1 128 74.2
BcaC01g02715 Brassica carinata HOM05D004438 ORTHO05D005256 1.7e-48 196.1 128 74.2
A06p31610 Brassica napus HOM05D004438 ORTHO05D005256 1.7e-48 196.1 128 74.2
C03p61350 Brassica napus HOM05D004438 ORTHO05D005256 1.7e-48 196.1 128 74.2
BolC3t18395H Brassica oleracea HOM05D004438 ORTHO05D005256 1.7e-48 196.1 128 74.2
BraA06t26098Z Brassica rapa HOM05D004438 ORTHO05D005256 1.7e-48 196.1 128 74.2
Oeu027202.1 Olea europaea HOM05D004438 ORTHO05D005256 1.7e-48 196.1 126 74.6
QL06p031963 Quercus lobata HOM05D004438 ORTHO05D005256 1.7e-48 196.1 126 75.4
Sp2g27890 Schrenkiella parvula HOM05D004438 ORTHO05D005256 1.7e-48 196.1 128 74.2
ECA233G2293 Erigeron canadensis HOM05D004438 ORTHO05D005256 2.2e-48 195.7 126 75.4
Thecc.01G114400 Theobroma cacao HOM05D004438 ORTHO05D005256 2.2e-48 195.7 126 76.2
Glyma.01G200000 Glycine max HOM05D004438 ORTHO05D005256 2.9e-48 195.3 128 74.2
QL01p009111 Quercus lobata HOM05D004438 ORTHO05D005256 2.9e-48 195.3 126 76.2
TWI74G1039 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 2.9e-48 195.3 125 76.0
CiPaw.03G133700 Carya illinoinensis HOM05D004438 ORTHO05D005256 3.8e-48 194.9 126 74.6
Dinv42684 Davidia involucrata HOM05D004438 ORTHO05D005256 3.8e-48 194.9 126 74.6
MD15G1331400 Malus domestica HOM05D004438 ORTHO05D005256 3.8e-48 194.9 128 78.1
HanXRQChr12g0372061 Helianthus annuus HOM05D004438 ORTHO05D005256 5.0e-48 194.5 126 73.8
Potri.002G105400 Populus trichocarpa HOM05D004438 ORTHO05D005256 5.0e-48 194.5 126 74.6
Potri.005G156400 Populus trichocarpa HOM05D004438 ORTHO05D005256 5.0e-48 194.5 126 74.6
Prupe.6G170300 Prunus persica HOM05D004438 ORTHO05D005256 5.0e-48 194.5 128 76.6
Zm00001eb006400 Zea mays HOM05D004438 ORTHO05D005256 5.0e-48 194.5 128 73.4
Glyma.10G190000 Glycine max HOM05D004438 ORTHO05D005256 6.5e-48 194.1 128 74.2
Medtr1g073620 Medicago truncatula HOM05D004438 ORTHO05D005256 6.5e-48 194.1 128 74.2
TAR625G0287 Trochodendron aralioides HOM05D004438 ORTHO05D005256 6.5e-48 194.1 126 73.0
CSS0020413 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 8.5e-48 193.7 126 73.0
CANSAT01G2942 Cannabis sativa HOM05D004438 ORTHO05D005256 8.5e-48 193.7 126 77.8
Dinv19477 Davidia involucrata HOM05D004438 ORTHO05D005256 8.5e-48 193.7 122 75.4
Migut.N00230 Erythranthe guttata HOM05D004438 ORTHO05D005256 8.5e-48 193.7 126 73.0
Lalb_Chr02g0150651 Lupinus albus HOM05D004438 ORTHO05D005256 8.5e-48 193.7 128 74.2
Ah.02g126620 Amaranthus hybridus HOM05D004438 ORTHO05D005256 1.1e-47 193.4 126 73.8
ClCG01G016040 Citrullus lanatus HOM05D004438 ORTHO05D005256 1.1e-47 193.4 126 73.8
Thhalv10005124m.g Eutrema salsugineum HOM05D004438 ORTHO05D005256 1.5e-47 193.0 126 74.6
Gohir.D11G231900 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.5e-47 193.0 126 76.2
Gohir.A11G053800 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.9e-47 192.6 126 74.6
Atru.chr13.1020 Acer truncatum HOM05D004438 ORTHO05D005256 2.5e-47 192.2 126 73.8
Aqoxy2G01099 Aquilegia oxysepala HOM05D004438 ORTHO05D005256 2.5e-47 192.2 128 72.7
SalBow3G3218 Salvia bowleyana HOM05D004438 ORTHO05D005256 2.5e-47 192.2 126 73.0
TAR625G0091 Trochodendron aralioides HOM05D004438 ORTHO05D005256 2.5e-47 192.2 126 72.2
Glyma.20G200800 Glycine max HOM05D004438 ORTHO05D005256 3.2e-47 191.8 128 71.1
Lj5g0016992 Lotus japonicus HOM05D004438 ORTHO05D005256 3.2e-47 191.8 128 73.4
Sed0014495 Sechium edule HOM05D004438 ORTHO05D005256 3.2e-47 191.8 126 72.2
Zm00001eb401580 Zea mays HOM05D004438 ORTHO05D005256 4.2e-47 191.4 128 71.9
RcHm_v2.0_Chr5g0031621 Rosa chinensis HOM05D000965 ORTHO05D000842 5.5e-47 191.0 128 74.2
PGSC0003DMG400009364 Solanum tuberosum HOM05D004438 ORTHO05D005256 5.5e-47 191.0 126 72.2
MSTRG.9937 Avicennia marina HOM05D004438 ORTHO05D005256 7.2e-47 190.7 126 73.0
CsaV3_6G042320 Cucumis sativus L. HOM05D004438 ORTHO05D005256 7.2e-47 190.7 126 72.2
Gohir.A10G084200 Gossypium hirsutum HOM05D004438 ORTHO05D005256 9.4e-47 190.3 126 73.8
Gohir.D11G057300 Gossypium hirsutum HOM05D004438 ORTHO05D005256 9.4e-47 190.3 126 73.0
Gorai.011G114100 Gossypium raimondii HOM05D004438 ORTHO05D005256 1.2e-46 189.9 126 73.0
Gohir.D10G104600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.6e-46 189.5 126 73.0
SGA_v2.0_scaffold79G25619 Striga asiatica HOM05D004438 ORTHO05D005256 1.6e-46 189.5 126 71.4
THA.LOC104819312 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 2.1e-46 189.1 126 71.4
MELO3C007474.2 Cucumis melo HOM05D004438 ORTHO05D005256 2.7e-46 188.7 126 72.2
HPP92_015825 Vanilla planifolia HOM05D004438 ORTHO05D005256 4.7e-46 188.0 125 70.4
Manes.10G131700 Manihot esculenta HOM05D004438 ORTHO05D005256 6.1e-46 187.6 126 71.4
Psat6g129880 Pisum sativum HOM05D004438 ORTHO05D005256 6.1e-46 187.6 128 71.1
Sc03g0004400 Simmondsia chinensis HOM05D004438 ORTHO05D005256 6.1e-46 187.6 121 76.0
Aa31LG1G17110 Aethionema arabicum HOM05D004438 ORTHO05D005256 8.0e-46 187.2 126 70.6
CAN.G344.10 Capsicum annuum HOM05D004438 ORTHO05D005256 8.0e-46 187.2 128 70.3
Ciclev10002841m.g Citrus clementina HOM05D004438 ORTHO05D005256 8.0e-46 187.2 126 70.6
Sed0003177 Sechium edule HOM05D004438 ORTHO05D005256 1.4e-45 186.4 126 71.4
vmacro18638 Vaccinium macrocarpon HOM05D004438 ORTHO05D005256 1.8e-45 186.0 126 71.4
GSVIVG01009169001 Vitis vinifera HOM05D004438 ORTHO05D005256 1.8e-45 186.0 126 72.2
Nn5g29898 Nelumbo nucifera HOM05D004438 ORTHO05D005256 2.3e-45 185.7 128 70.3
SGA_v2.0_scaffold308G48110 Striga asiatica HOM05D004438 ORTHO05D005256 4.0e-45 184.9 126 69.0
Psat7g208520 Pisum sativum HOM05D004438 ORTHO05D005256 5.2e-45 184.5 128 71.9
Nitab4.5_0000184g0290 Nicotiana tabacum HOM05D004438 ORTHO05D005256 6.7e-45 184.1 121 73.6
unitig_699.g19132 Utricularia gibba HOM05D004438 ORTHO05D005256 8.8e-45 183.7 126 68.3
SalBow2G1806 Salvia bowleyana HOM05D004438 ORTHO05D005256 3.3e-44 181.8 127 69.3
Mapoly0031s0095 Marchantia polymorpha HOM05D004438 ORTHO05D005256 4.4e-44 181.4 130 66.9
Migut.G00404 Erythranthe guttata HOM05D004438 ORTHO05D005256 2.2e-43 179.1 129 67.4
Sc23g0000680 Simmondsia chinensis HOM05D004438 ORTHO05D005256 3.7e-43 178.3 126 69.0
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 1.8e-42 176.0 118 72.0
Sabra02G0082700 Salix brachista HOM05D004438 ORTHO05D005256 5.3e-42 174.5 118 72.9
SHI31196 Sapria himalayana HOM05D004438 ORTHO05D005256 5.3e-42 174.5 126 65.9
Lalb_Chr21g0312471 Lupinus albus HOM05D004438 ORTHO05D005256 7.0e-42 174.1 124 70.2
AagrBONN_evm.TU.Sc2ySwM_117.295 Anthoceros agrestis HOM05D004438 ORTHO05D005256 9.1e-42 173.7 129 61.2
Sabra05G0119900 Salix brachista HOM05D004438 ORTHO05D005256 1.6e-41 172.9 118 72.0
Nn1g08461 Nelumbo nucifera HOM05D004438 ORTHO05D005256 2.0e-41 172.6 109 78.0
EL10Ac6g13106 Beta vulgaris HOM05D004438 ORTHO05D005256 5.9e-41 171.0 113 73.5
Manes.02G145100 Manihot esculenta HOM05D004438 ORTHO05D005256 5.9e-41 171.0 116 74.1
Pp3c22_12110 Physcomitrium patens HOM05D004438 ORTHO05D005256 5.9e-41 171.0 126 62.7
TWI56G0149 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 7.7e-41 170.6 127 67.7
Nitab4.5_0004977g0040 Nicotiana tabacum HOM05D004438 ORTHO05D005256 3.8e-40 168.3 113 73.5
FvH4_3g18771 Fragaria vesca HOM05D004438 ORTHO05D005256 5.0e-40 167.9 121 71.1
Gorai.007G062500 Gossypium raimondii HOM05D004438 ORTHO05D005256 6.5e-40 167.5 126 68.3
Nitab4.5_0004977g0030 Nicotiana tabacum HOM05D004438 ORTHO05D005256 1.6e-38 162.9 84 83.3
FAN16G1755 Fragaria x ananassa HOM05D004438 ORTHO05D005256 2.7e-38 162.2 112 72.3
SEGI_36857 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 4.0e-37 158.3 93 77.4
Duzib264G0014 Durio zibethinus HOM05D004438 ORTHO05D005256 5.7e-36 154.5 106 74.5
Pp3c19_18370 Physcomitrium patens HOM05D004438 ORTHO05D005256 9.8e-36 153.7 125 56.0
FAN11G0727 Fragaria x ananassa HOM05D000965 ORTHO05D000842 3.7e-35 151.8 104 72.1
FAN21G3234 Fragaria x ananassa HOM05D000965 ORTHO05D000842 6.3e-35 151.0 104 71.2
SEGI_35678 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 3.1e-34 148.7 131 54.2
AagrBONN_evm.TU.Sc2ySwM_344.1988 Anthoceros agrestis HOM05D004438 ORTHO05D005256 2.0e-33 146.0 129 55.0
COL.COLO4_35234 Corchorus olitorius HOM05D004438 ORTHO05D005256 2.7e-33 145.6 128 57.0
Oeu028520.2 Olea europaea HOM05D004438 ORTHO05D005256 5.0e-32 141.4 108 68.5
CSS0036861 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 3.6e-30 135.2 104 65.4
Gohir.1Z049407 Gossypium hirsutum HOM05D004438 ORTHO05D005256 4.7e-30 134.8 72 81.9
Rhsim08G0005900 Rhododendron simsii HOM05D004438 ORTHO05D005256 1.2e-28 130.2 108 62.0
arahy.Tifrunner.gnm1.ann1.7JV24P Arachis hypogaea HOM05D004438 ORTHO05D005256 5.9e-25 117.9 57 87.7
ATR0049G041 Amborella trichopoda HOM05D004438 ORTHO05D005256 3.3e-23 112.1 128 43.0
MCO08G336 Micromonas commoda HOM05D004438 ORTHO05D005256 4.0e-21 105.1 113 47.8
Cre07.g313800 Chlamydomonas reinhardtii HOM05D004438 ORTHO05D005256 5.2e-21 104.8 74 58.1
PRCOL_00001176 Prasinoderma coloniale HOM05D004438 ORTHO05D005256 5.2e-21 104.8 125 40.8
CSS0009061 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 9.8e-20 100.5 93 54.8
CSS0034319 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 2.2e-19 99.4 113 49.6
CSS0036545 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 8.0e-14 80.9 40 87.5
CiPaw.04G091100 Carya illinoinensis HOM05D004438 ORTHO05D005256 7.5e-12 74.3 68 60.3
Hund21738 Selenicereus undatus HOM05D004438 ORTHO05D005256 6.4e-11 71.2 35 88.6
SalBow2G3602 Salvia bowleyana HOM05D004438 ORTHO05D005256 1.3e-08 63.5 32 84.4
CBR_g51299 Chara braunii HOM05D004438 ORTHO05D005256 2.3e-08 62.8 35 74.3
SalBow1G8643 Salvia bowleyana HOM05D000379 ORTHO05D000254 3.3e-07 58.9 33 72.7


User provided reference genes

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