Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1128G112 Amborella trichopoda HOM05D053262 ORTHO05D031099 1.8e-81 305.8 150 100.0
ATR0950G001 Amborella trichopoda HOM05D053262 ORTHO05D031099 2.5e-59 232.3 116 95.7
Rhsim08G0167000 Rhododendron simsii HOM05D000938 ORTHO05D001451 2.8e-10 69.3 127 33.9
Psat3g063440 Pisum sativum HOM05D000938 ORTHO05D001451 3.7e-10 68.9 97 38.1
Nitab4.5_0000003g0270 Nicotiana tabacum HOM05D000938 ORTHO05D001451 4.8e-10 68.6 104 40.4
Rhsim08G0167100 Rhododendron simsii HOM05D000938 ORTHO05D001451 4.8e-10 68.6 127 36.2
QL10p013804 Quercus lobata HOM05D000938 ORTHO05D031099 1.1e-09 67.4 107 37.4
CAN.G628.65 Capsicum annuum HOM05D000938 ORTHO05D001451 1.4e-09 67.0 98 37.8
QL10p013755 Quercus lobata HOM05D000938 ORTHO05D001451 1.4e-09 67.0 108 37.0
Nitab4.5_0002101g0050 Nicotiana tabacum HOM05D000938 ORTHO05D001451 1.8e-09 66.6 119 37.0
Cfa019057 Carpinus fangiana HOM05D000938 ORTHO05D001451 9.1e-09 64.3 122 38.5
Lj1g0027652 Lotus japonicus HOM05D000938 ORTHO05D001451 9.1e-09 64.3 117 37.6
Phvul.009G183000 Phaseolus vulgaris HOM05D000938 ORTHO05D001451 1.2e-08 63.9 114 34.2
Potri.015G069600 Populus trichocarpa HOM05D000938 ORTHO05D001451 1.2e-08 63.9 124 34.7
Cfa019056 Carpinus fangiana HOM05D000938 ORTHO05D001451 1.5e-08 63.5 118 39.0
TAR622G0614 Trochodendron aralioides HOM05D000938 ORTHO05D001451 1.5e-08 63.5 103 36.9
Dinv13126 Davidia involucrata HOM05D000938 ORTHO05D001451 2.6e-08 62.8 105 36.2
QL10p013718 Quercus lobata HOM05D000938 ORTHO05D001451 3.4e-08 62.4 120 33.3
Ca_02974_v3 Cicer arietinum L. HOM05D000938 ORTHO05D001451 4.5e-08 62.0 96 37.5
Haze_07425 Corylus avellana HOM05D000938 ORTHO05D001451 4.5e-08 62.0 122 38.5
Hma1.2p1_0002F.1_g002930 Hydrangea macrophylla HOM05D000938 ORTHO05D001451 4.5e-08 62.0 121 31.4
CSS0034617 Camellia sinensis var. sinensis HOM05D000938 ORTHO05D001451 7.7e-08 61.2 132 34.1
Medtr3g079340 Medicago truncatula HOM05D000938 ORTHO05D001451 7.7e-08 61.2 96 35.4
Peaxi162Scf00689g00421 Petunia axillaris HOM05D000938 ORTHO05D001451 7.7e-08 61.2 69 46.4
Sc04g0002190 Simmondsia chinensis HOM05D000938 ORTHO05D001451 7.7e-08 61.2 124 32.3
TPR.G19419 Trifolium pratense HOM05D000938 ORTHO05D001451 7.7e-08 61.2 96 36.5
Psat0s1748g0200 Pisum sativum HOM05D000938 ORTHO05D001451 1.0e-07 60.8 101 36.6
Sabra12G0053200 Salix brachista HOM05D000938 ORTHO05D001451 1.0e-07 60.8 109 37.6
Eucgr.K02888 Eucalyptus grandis HOM05D000938 ORTHO05D001451 1.3e-07 60.5 113 33.6
MELO3C017130.2 Cucumis melo HOM05D000938 ORTHO05D001451 2.2e-07 59.7 95 38.9
CSS0044008 Camellia sinensis var. sinensis HOM05D000938 ORTHO05D001451 2.9e-07 59.3 131 33.6
Cfa019054 Carpinus fangiana HOM05D000938 ORTHO05D001451 2.9e-07 59.3 124 36.3
Nn4g22948 Nelumbo nucifera HOM05D000938 ORTHO05D001451 2.9e-07 59.3 122 32.0
Lj1g0026905 Lotus japonicus HOM05D000938 ORTHO05D001451 3.8e-07 58.9 105 36.2
Cpa.g.sc35.21 Carica papaya HOM05D000938 ORTHO05D001451 5.0e-07 58.5 97 39.2
TAR374G0136 Trochodendron aralioides HOM05D000938 ORTHO05D001451 5.0e-07 58.5 99 36.4
CANSAT80G2760 Cannabis sativa HOM05D000938 ORTHO05D001451 6.5e-07 58.2 97 35.1
Lj5A120T55 Lonicera japonica HOM05D000938 ORTHO05D001451 6.5e-07 58.2 130 32.3
SalBow5G5049 Salvia bowleyana HOM05D000938 ORTHO05D001451 6.5e-07 58.2 106 35.8
SalBow5G5397 Salvia bowleyana HOM05D000938 ORTHO05D001451 6.5e-07 58.2 106 35.8
Sopen06g027580 Solanum pennellii HOM05D000938 ORTHO05D001451 6.5e-07 58.2 120 33.3
PGR044G1186 Punica granatum HOM05D000938 ORTHO05D001451 8.5e-07 57.8 113 34.5
Solyc06g071280.4 Solanum lycopersicum HOM05D000938 ORTHO05D001451 8.5e-07 57.8 120 32.5
VMungo1309G1144 Vigna mungo HOM05D000938 ORTHO05D001451 8.5e-07 57.8 94 35.1
Aqoxy3G03148 Aquilegia oxysepala HOM05D000938 ORTHO05D001451 1.1e-06 57.4 124 32.3
EL10Ac5g10855 Beta vulgaris HOM05D000938 ORTHO05D001451 1.1e-06 57.4 104 35.6
TWI39G0860 Tripterygium wilfordii HOM05D000938 ORTHO05D001451 1.1e-06 57.4 114 33.3
Ah.02g112840 Amaranthus hybridus HOM05D000938 ORTHO05D001451 1.4e-06 57.0 93 38.7
Lalb_Chr23g0273061 Lupinus albus HOM05D000938 ORTHO05D001451 1.4e-06 57.0 92 39.1
Hund09400 Selenicereus undatus HOM05D000938 ORTHO05D001451 1.4e-06 57.0 128 33.6
MSTRG.23074 Avicennia marina HOM05D000938 ORTHO05D001451 1.9e-06 56.6 105 33.3
Ciclev10000629m.g Citrus clementina HOM05D000938 ORTHO05D001451 2.5e-06 56.2 98 39.8
Cc04_g16220 Coffea canephora HOM05D000938 ORTHO05D001451 2.5e-06 56.2 125 32.8
CsaV3_1G001870 Cucumis sativus L. HOM05D000938 ORTHO05D001451 2.5e-06 56.2 94 38.3
Lsat_1_v5_gn_5_18180 Lactuca sativa HOM05D000938 ORTHO05D001451 3.2e-06 55.8 110 33.6
PGSC0003DMG400033029 Solanum tuberosum HOM05D000938 ORTHO05D001451 3.2e-06 55.8 101 35.6
CiPaw.11G033100 Carya illinoinensis HOM05D000938 ORTHO05D001451 4.2e-06 55.5 111 31.5
AUR62031060 Chenopodium quinoa HOM05D000938 ORTHO05D001451 5.5e-06 55.1 113 34.5
ClCG06G016640 Citrullus lanatus HOM05D000938 ORTHO05D001451 5.5e-06 55.1 94 35.1
Ciclev10000326m.g Citrus clementina HOM05D000938 ORTHO05D001451 5.5e-06 55.1 98 38.8
Lalb_Chr08g0236121 Lupinus albus HOM05D000938 ORTHO05D001451 5.5e-06 55.1 115 33.0
Manes.06G099600 Manihot esculenta HOM05D000938 ORTHO05D001451 5.5e-06 55.1 118 31.4
Sabra15G0093800 Salix brachista HOM05D000938 ORTHO05D001451 5.5e-06 55.1 104 37.5
AUR62008298 Chenopodium quinoa HOM05D000938 ORTHO05D001451 7.2e-06 54.7 99 38.4
Glyma.06G187200 Glycine max HOM05D000938 ORTHO05D001451 7.2e-06 54.7 114 29.8
Lsat_1_v5_gn_5_18140 Lactuca sativa HOM05D000938 ORTHO05D001451 7.2e-06 54.7 104 33.7
Medtr3g078633 Medicago truncatula HOM05D000938 ORTHO05D001451 7.2e-06 54.7 115 33.0
Potri.012G074700 Populus trichocarpa HOM05D000938 ORTHO05D001451 7.2e-06 54.7 118 32.2
Sed0023408 Sechium edule HOM05D000938 ORTHO05D001451 7.2e-06 54.7 92 38.0
DCAR_015521 Daucus carota HOM05D000938 ORTHO05D001451 9.4e-06 54.3 99 33.3
VMungo1309G2062 Vigna mungo HOM05D000938 ORTHO05D001451 9.4e-06 54.3 107 32.7


User provided reference genes

Program Settings