Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1127G234 Amborella trichopoda HOM05D007641 ORTHO05D007630 1.2e-214 749.6 369 100.0
Atru.chr10.2293 Acer truncatum HOM05D007641 ORTHO05D007630 7.1e-15 85.9 219 28.8
Ciclev10004023m.g Citrus clementina HOM05D007641 ORTHO05D007630 7.9e-14 82.4 234 31.2
Cpa.g.sc2.293 Carica papaya HOM05D007641 ORTHO05D007630 1.8e-13 81.3 300 30.7
HanXRQChr08g0230341 Helianthus annuus HOM05D007641 ORTHO05D007630 2.3e-13 80.9 234 33.3
CANSAT54G2173 Cannabis sativa HOM05D007641 ORTHO05D007630 3.9e-13 80.1 220 30.5
QL01p024477 Quercus lobata HOM05D007641 ORTHO05D007630 6.7e-13 79.3 218 31.2
Sp4g13010 Schrenkiella parvula HOM05D001940 ORTHO05D007630 8.7e-13 79.0 209 33.0
Dinv28733 Davidia involucrata HOM05D007641 ORTHO05D007630 3.3e-12 77.0 222 28.8
Nn2g10289 Nelumbo nucifera HOM05D007641 ORTHO05D007630 4.3e-12 76.6 230 26.1
Phvul.006G079400 Phaseolus vulgaris HOM05D007641 ORTHO05D007630 4.3e-12 76.6 243 30.9
Glyma.18G052000 Glycine max HOM05D007641 ORTHO05D007630 5.7e-12 76.3 236 28.4
Gohir.A08G000032 Gossypium hirsutum HOM05D007641 ORTHO05D007630 5.7e-12 76.3 231 28.6
Psat5g147960 Pisum sativum HOM05D007641 ORTHO05D007630 9.7e-12 75.5 254 29.1
Os01g0167700 Oryza sativa ssp. japonica HOM05D052079 ORTHO05D007630 1.3e-11 75.1 248 29.4
RcHm_v2.0_Chr5g0073231 Rosa chinensis HOM05D007641 ORTHO05D007630 1.3e-11 75.1 244 30.7
BcaB02g10326 Brassica carinata HOM05D001940 ORTHO05D007630 2.2e-11 74.3 230 30.9
GSVIVG01024555001 Vitis vinifera HOM05D007641 ORTHO05D007630 2.2e-11 74.3 188 29.8
TWI79G1607 Tripterygium wilfordii HOM05D007641 ORTHO05D007630 4.8e-11 73.2 244 29.5
VMungo0540G0343 Vigna mungo HOM05D007641 ORTHO05D007630 4.8e-11 73.2 250 29.6
AUR62001158 Chenopodium quinoa HOM05D029401 ORTHO05D007630 6.3e-11 72.8 244 29.9
BcaC02g11137 Brassica carinata HOM05D001940 ORTHO05D007630 8.2e-11 72.4 207 29.5
Nitab4.5_0001868g0030 Nicotiana tabacum HOM05D014625 ORTHO05D007630 8.2e-11 72.4 236 30.1
Aqoxy1G01263 Aquilegia oxysepala HOM05D007641 ORTHO05D007630 1.1e-10 72.0 267 27.0
PSO170G4823 Papaver somniferum HOM05D007641 ORTHO05D007630 1.1e-10 72.0 246 28.0
CsaV3_6G013130 Cucumis sativus L. HOM05D007641 ORTHO05D007630 2.4e-10 70.9 245 29.4
Sabra13G0126700 Salix brachista HOM05D007641 ORTHO05D002352 2.4e-10 70.9 258 27.9
Actinidia34497 Actinidia chinensis HOM05D007641 ORTHO05D007630 4.1e-10 70.1 198 29.8
ECA247G3209 Erigeron canadensis HOM05D007641 ORTHO05D007630 4.1e-10 70.1 118 34.7
Migut.D00817 Erythranthe guttata HOM05D007641 ORTHO05D007630 5.3e-10 69.7 237 28.7
ClCG02G019020 Citrullus lanatus HOM05D007641 ORTHO05D007630 6.9e-10 69.3 211 28.9
FAN11G1956 Fragaria x ananassa HOM05D007641 ORTHO05D007630 6.9e-10 69.3 256 29.7
FAN25G3378 Fragaria x ananassa HOM05D007641 ORTHO05D007630 9.0e-10 68.9 242 29.8
Potri.013G157800 Populus trichocarpa HOM05D007641 ORTHO05D007630 1.2e-09 68.6 223 28.3
SGA_v2.0_scaffold20G09288 Striga asiatica HOM05D007641 ORTHO05D007630 1.5e-09 68.2 273 27.5
arahy.Tifrunner.gnm1.ann1.4PHV2I Arachis hypogaea HOM05D007641 ORTHO05D007630 2.0e-09 67.8 228 27.2
CiPaw.13G063300 Carya illinoinensis HOM05D007641 ORTHO05D007630 2.6e-09 67.4 212 27.8
Prupe.6G040800 Prunus persica HOM05D007641 ORTHO05D007630 3.4e-09 67.0 93 39.8
HPP92_015425 Vanilla planifolia HOM05D007641 ORTHO05D007630 4.5e-09 66.6 248 29.4
AT2G30480 Arabidopsis thaliana HOM05D001940 ORTHO05D007630 5.9e-09 66.2 236 29.2
A05p14980 Brassica napus HOM05D001940 ORTHO05D007630 5.9e-09 66.2 236 28.8
TAR636G3352 Trochodendron aralioides HOM05D007641 ORTHO05D007630 1.0e-08 65.5 138 31.2
Thecc.09G364100 Theobroma cacao HOM05D007641 ORTHO05D007630 1.7e-08 64.7 210 27.6
MBI15_g36478_MAGBIO Magnolia biondii HOM05D007641 ORTHO05D007630 2.2e-08 64.3 87 42.5
Lj6g0005873 Lotus japonicus HOM05D007641 ORTHO05D007630 2.9e-08 63.9 216 28.7
Manes.02G212232 Manihot esculenta HOM05D007641 ORTHO05D007630 8.5e-08 62.4 231 25.5
Rhsim01G0243500 Rhododendron simsii HOM05D007641 ORTHO05D007630 8.5e-08 62.4 92 34.8
FvH4_3g40550 Fragaria vesca HOM05D007641 ORTHO05D007630 1.1e-07 62.0 246 28.5
BolC4t23545H Brassica oleracea HOM05D001940 ORTHO05D007630 2.5e-07 60.8 183 27.9
Duzib168G1492 Durio zibethinus HOM05D007641 ORTHO05D007630 3.2e-07 60.5 221 29.0
Lsat_1_v5_gn_9_13760 Lactuca sativa HOM05D007641 ORTHO05D007630 4.2e-07 60.1 106 34.0
Hund18459 Selenicereus undatus HOM05D029401 ORTHO05D007630 4.2e-07 60.1 226 24.8
Peaxi162Scf00605g00515 Petunia axillaris HOM05D014625 ORTHO05D007630 1.2e-06 58.5 242 28.1
AL4G25360 Arabidopsis lyrata HOM05D001940 ORTHO05D007630 2.1e-06 57.8 193 28.5
TPR.G13882 Trifolium pratense HOM05D007641 ORTHO05D007630 2.1e-06 57.8 291 25.4
Thhalv10017756m.g Eutrema salsugineum HOM05D001940 ORTHO05D007630 3.6e-06 57.0 62 43.5
Medtr3g467390 Medicago truncatula HOM05D007641 ORTHO05D007630 3.6e-06 57.0 117 30.8
Haze_24474 Corylus avellana HOM05D007641 ORTHO05D007630 4.6e-06 56.6 61 45.9
DCAR_018642 Daucus carota HOM05D007641 ORTHO05D007630 6.1e-06 56.2 158 30.4
PSO017G1347 Papaver somniferum HOM05D007641 ORTHO05D007630 6.1e-06 56.2 211 27.5
BraA05t20424Z Brassica rapa HOM05D001940 ORTHO05D007630 7.9e-06 55.8 202 27.2
Lalb_Chr18g0054201 Lupinus albus HOM05D007641 ORTHO05D007630 7.9e-06 55.8 110 33.6


User provided reference genes

Program Settings