Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1127G217 Amborella trichopoda HOM05D000287 ORTHO05D038330 1.8e-69 265.8 135 100.0
ATR1127G088 Amborella trichopoda HOM05D000287 ORTHO05D038330 4.4e-39 164.9 136 66.2
Lj1A966G37 Lonicera japonica HOM05D000287 ORTHO05D002423 2.0e-15 86.3 132 40.9
GSVIVG01032686001 Vitis vinifera HOM05D000287 ORTHO05D002423 2.6e-15 85.9 132 39.4
Atru.chr12.180 Acer truncatum HOM05D000287 ORTHO05D002423 3.4e-15 85.5 132 37.9
CSS0016245 Camellia sinensis var. sinensis HOM05D000287 ORTHO05D002423 4.5e-15 85.1 131 37.4
MD07G1233500 Malus domestica HOM05D000287 ORTHO05D002423 3.8e-14 82.0 123 37.4
Thecc.10G181300 Theobroma cacao HOM05D000287 ORTHO05D002423 6.4e-14 81.3 132 34.8
RcHm_v2.0_Chr1g0372211 Rosa chinensis HOM05D000287 ORTHO05D002423 3.2e-13 79.0 123 35.0
Atru.chr12.178 Acer truncatum HOM05D000287 ORTHO05D002423 4.2e-13 78.6 123 36.6
Gohir.A06G179200 Gossypium hirsutum HOM05D000287 ORTHO05D002423 7.1e-13 77.8 132 34.1
Gohir.D06G186200 Gossypium hirsutum HOM05D000287 ORTHO05D002423 7.1e-13 77.8 132 34.1
Hma1.2p1_2030F.1_g311800 Hydrangea macrophylla HOM05D000287 ORTHO05D002423 7.1e-13 77.8 122 38.5
Aqoxy4G02412 Aquilegia oxysepala HOM05D000287 ORTHO05D002423 9.3e-13 77.4 131 36.6
COL.COLO4_19358 Corchorus olitorius HOM05D000287 ORTHO05D002423 1.2e-12 77.0 132 33.3
Gorai.010G218500 Gossypium raimondii HOM05D000287 ORTHO05D002423 1.2e-12 77.0 132 34.1
Actinidia31625 Actinidia chinensis HOM05D000287 ORTHO05D002423 2.7e-12 75.9 130 38.5
Aqoxy1G03524 Aquilegia oxysepala HOM05D000287 ORTHO05D002423 2.7e-12 75.9 131 35.9
RcHm_v2.0_Chr5g0039131 Rosa chinensis HOM05D000287 ORTHO05D002423 6.0e-12 74.7 123 35.0
Potri.019G057901 Populus trichocarpa HOM05D000287 ORTHO05D002423 7.9e-12 74.3 131 32.1
TAR623G0915 Trochodendron aralioides HOM05D000287 ORTHO05D002423 1.0e-11 73.9 131 37.4
FvH4_5g35780 Fragaria vesca HOM05D000287 ORTHO05D002423 1.3e-11 73.6 123 33.3
FAN08G0726 Fragaria x ananassa HOM05D000287 ORTHO05D002423 1.3e-11 73.6 123 33.3
MD03G1205100 Malus domestica HOM05D000287 ORTHO05D002423 1.8e-11 73.2 123 34.1
Aqoxy4G02418 Aquilegia oxysepala HOM05D000287 ORTHO05D002423 2.3e-11 72.8 131 32.8
FvH4_7g25900 Fragaria vesca HOM05D000287 ORTHO05D002423 2.3e-11 72.8 123 35.0
FAN06G3748 Fragaria x ananassa HOM05D000287 ORTHO05D002423 2.3e-11 72.8 123 35.0
FAN03G0028 Fragaria x ananassa HOM05D000287 ORTHO05D002423 3.0e-11 72.4 123 34.1
FAN10G1289 Fragaria x ananassa HOM05D000287 ORTHO05D002423 3.0e-11 72.4 123 34.1
FAN04G3105 Fragaria x ananassa HOM05D000287 ORTHO05D002423 3.9e-11 72.0 123 33.3
Sed0017363 Sechium edule HOM05D000287 ORTHO05D002423 5.1e-11 71.6 125 32.8
Migut.H01569 Erythranthe guttata HOM05D000287 ORTHO05D002423 8.7e-11 70.9 124 32.3
Nitab4.5_0001604g0130 Nicotiana tabacum HOM05D000287 ORTHO05D002423 1.1e-10 70.5 123 33.3
Lj2A1101T52 Lonicera japonica HOM05D000287 ORTHO05D002423 1.5e-10 70.1 131 34.4
TAR633G1060 Trochodendron aralioides HOM05D000287 ORTHO05D002423 1.5e-10 70.1 131 34.4
FvH4_3g40490 Fragaria vesca HOM05D000287 ORTHO05D002423 3.3e-10 68.9 131 31.3
FAN11G2109 Fragaria x ananassa HOM05D000287 ORTHO05D002423 3.3e-10 68.9 131 31.3
Prupe.6G041200 Prunus persica HOM05D000287 ORTHO05D002423 4.3e-10 68.6 118 33.1
Cpa.g.sc13.216 Carica papaya HOM05D000287 ORTHO05D002423 5.6e-10 68.2 133 33.8
FAN13G1595 Fragaria x ananassa HOM05D000287 ORTHO05D002423 5.6e-10 68.2 112 33.0
MBI03_g40026_MAGBIO Magnolia biondii HOM05D000287 ORTHO05D002423 7.4e-10 67.8 123 33.3
MBI15_g27670_MAGBIO Magnolia biondii HOM05D000287 ORTHO05D002423 7.4e-10 67.8 118 34.7
PGR031G2665 Punica granatum HOM05D000287 ORTHO05D002423 7.4e-10 67.8 124 31.5
MBI03_g22422_MAGBIO Magnolia biondii HOM05D000287 ORTHO05D000319 9.6e-10 67.4 131 34.4
Manes.15G073000 Manihot esculenta HOM05D000287 ORTHO05D002423 9.6e-10 67.4 125 32.0
FAN21G1691 Fragaria x ananassa HOM05D000287 ORTHO05D002423 1.3e-09 67.0 131 29.8
Hma1.2p1_1271F.1_g271700 Hydrangea macrophylla HOM05D000287 ORTHO05D002423 2.1e-09 66.2 123 31.7
SEGI_01440 Sequoiadendron giganteum HOM05D000287 ORTHO05D002423 2.1e-09 66.2 122 32.0
arahy.Tifrunner.gnm1.ann1.LE699N Arachis hypogaea HOM05D000287 ORTHO05D002423 2.8e-09 65.9 132 30.3
FAN16G3152 Fragaria x ananassa HOM05D000287 ORTHO05D002423 2.8e-09 65.9 131 29.8
MBI15_g01590_MAGBIO Magnolia biondii HOM05D000287 ORTHO05D002423 3.7e-09 65.5 118 33.9
PGR004G2337 Punica granatum HOM05D000287 ORTHO05D002423 3.7e-09 65.5 118 33.1
FAN25G0206 Fragaria x ananassa HOM05D000287 ORTHO05D002423 4.8e-09 65.1 131 29.8
SalBow1G3549 Salvia bowleyana HOM05D000287 ORTHO05D002423 8.2e-09 64.3 123 28.5
Actinidia05103 Actinidia chinensis HOM05D000287 ORTHO05D002423 1.1e-08 63.9 123 32.5
MBI18_g43122_MAGBIO Magnolia biondii HOM05D000287 ORTHO05D002423 1.1e-08 63.9 125 32.8
Atru.chr10.2189 Acer truncatum HOM05D000287 ORTHO05D002423 1.4e-08 63.5 123 32.5
Haze_24469 Corylus avellana HOM05D000287 ORTHO05D002423 1.4e-08 63.5 131 31.3
Potri.011G137800 Populus trichocarpa HOM05D000287 ORTHO05D002423 1.4e-08 63.5 123 30.9
SEGI_29099 Sequoiadendron giganteum HOM05D000287 ORTHO05D002423 1.4e-08 63.5 131 32.8
LjContig00272g0008852 Lotus japonicus HOM05D000287 ORTHO05D002423 1.8e-08 63.2 132 30.3
Atru.chr2.3375 Acer truncatum HOM05D000287 ORTHO05D002423 2.4e-08 62.8 123 30.1
Atru.chr2.3376 Acer truncatum HOM05D000287 ORTHO05D002423 2.4e-08 62.8 123 30.1
ATR1127G040 Amborella trichopoda HOM05D000287 ORTHO05D000319 2.4e-08 62.8 118 33.1
Aqoxy1G03950 Aquilegia oxysepala HOM05D000287 ORTHO05D002423 2.4e-08 62.8 131 29.8
RhsimUnG0251400 Rhododendron simsii HOM05D000287 ORTHO05D002423 2.4e-08 62.8 123 30.9
SEGI_41074 Sequoiadendron giganteum HOM05D000287 ORTHO05D002423 2.4e-08 62.8 124 34.7
Oeu037357.1 Olea europaea HOM05D000287 ORTHO05D002423 3.1e-08 62.4 123 29.3
GSVIVG01037625001 Vitis vinifera HOM05D000287 ORTHO05D002423 3.1e-08 62.4 123 33.3
Lj1A119G24 Lonicera japonica HOM05D000287 ORTHO05D002423 4.0e-08 62.0 118 32.2
SEGI_20588 Sequoiadendron giganteum HOM05D000287 ORTHO05D002423 4.0e-08 62.0 118 36.4
Actinidia05102 Actinidia chinensis HOM05D000287 ORTHO05D002423 5.3e-08 61.6 123 30.9
Actinidia10727 Actinidia chinensis HOM05D000287 ORTHO05D002423 5.3e-08 61.6 117 33.3
Oeu062592.1 Olea europaea HOM05D000287 ORTHO05D002423 5.3e-08 61.6 123 31.7
Potri.012G115000 Populus trichocarpa HOM05D000287 ORTHO05D002423 5.3e-08 61.6 132 33.3
CANSAT01G2397 Cannabis sativa HOM05D000287 ORTHO05D002423 6.9e-08 61.2 123 27.6
SEGI_09434 Sequoiadendron giganteum HOM05D000287 ORTHO05D002423 6.9e-08 61.2 122 29.5
Ciclev10018022m.g Citrus clementina HOM05D000287 ORTHO05D002423 9.0e-08 60.8 123 30.1
MD11G1053900 Malus domestica HOM05D000287 ORTHO05D002423 9.0e-08 60.8 131 32.1
SEGI_14636 Sequoiadendron giganteum HOM05D000287 ORTHO05D000319 9.0e-08 60.8 124 33.1
SEGI_30524 Sequoiadendron giganteum HOM05D000287 ORTHO05D002423 9.0e-08 60.8 118 33.9
TWI39G0593 Tripterygium wilfordii HOM05D000287 ORTHO05D002423 9.0e-08 60.8 123 30.1
Actinidia36946 Actinidia chinensis HOM05D000287 ORTHO05D002423 1.2e-07 60.5 123 30.9
SEGI_31770 Sequoiadendron giganteum HOM05D000287 ORTHO05D002423 1.2e-07 60.5 123 29.3
CSS0024810 Camellia sinensis var. sinensis HOM05D000287 ORTHO05D002423 1.5e-07 60.1 123 30.9
SEGI_06981 Sequoiadendron giganteum HOM05D000093 ORTHO05D000319 1.5e-07 60.1 131 31.3
SEGI_33526 Sequoiadendron giganteum HOM05D000093 ORTHO05D000319 1.5e-07 60.1 131 31.3
TAR626G1790 Trochodendron aralioides HOM05D000287 ORTHO05D002423 1.5e-07 60.1 120 31.7
RcHm_v2.0_Chr5g0073161 Rosa chinensis HOM05D000287 ORTHO05D002423 2.0e-07 59.7 117 29.1
SEGI_38301 Sequoiadendron giganteum HOM05D000093 ORTHO05D000319 2.0e-07 59.7 131 30.5
SEGI_40645 Sequoiadendron giganteum HOM05D000287 ORTHO05D002423 2.0e-07 59.7 122 30.3
MELO3C018117.2 Cucumis melo HOM05D000287 ORTHO05D002423 2.6e-07 59.3 126 31.7
DCAR_002851 Daucus carota HOM05D000287 ORTHO05D002423 2.6e-07 59.3 132 30.3
Migut.M01777 Erythranthe guttata HOM05D000287 ORTHO05D002423 2.6e-07 59.3 125 33.6
MD03G1051800 Malus domestica HOM05D000287 ORTHO05D002423 2.6e-07 59.3 113 32.7
MD03G1183000 Malus domestica HOM05D000287 ORTHO05D002423 3.4e-07 58.9 89 34.8
Potri.011G001500 Populus trichocarpa HOM05D000287 ORTHO05D002423 4.5e-07 58.5 120 30.8
SEGI_33175 Sequoiadendron giganteum HOM05D000287 ORTHO05D002423 4.5e-07 58.5 123 29.3
Dinv20038 Davidia involucrata HOM05D000287 ORTHO05D002423 5.8e-07 58.2 123 30.1
SEGI_34469 Sequoiadendron giganteum HOM05D000287 ORTHO05D002423 5.8e-07 58.2 123 30.9
Potri.004G017633 Populus trichocarpa HOM05D000287 ORTHO05D002423 7.6e-07 57.8 119 28.6
RcHm_v2.0_Chr5g0039121 Rosa chinensis HOM05D000287 ORTHO05D002423 7.6e-07 57.8 89 34.8
SEGI_01652 Sequoiadendron giganteum HOM05D000287 ORTHO05D000319 7.6e-07 57.8 122 28.7
SEGI_24092 Sequoiadendron giganteum HOM05D000287 ORTHO05D002423 7.6e-07 57.8 122 28.7
CiPaw.14G050600 Carya illinoinensis HOM05D000287 ORTHO05D002423 1.0e-06 57.4 84 36.9
FAN11G1815 Fragaria x ananassa HOM05D000287 ORTHO05D002423 1.0e-06 57.4 89 33.7
SEGI_34279 Sequoiadendron giganteum HOM05D000287 ORTHO05D002423 1.0e-06 57.4 119 30.3
TWI39G0101 Tripterygium wilfordii HOM05D000287 ORTHO05D002423 1.0e-06 57.4 129 32.6
CsaV3_3G022960 Cucumis sativus L. HOM05D000287 ORTHO05D002423 1.3e-06 57.0 126 31.7
SEGI_29371 Sequoiadendron giganteum HOM05D000287 ORTHO05D000319 1.3e-06 57.0 131 29.0
MBI03_g15600_MAGBIO Magnolia biondii HOM05D000287 ORTHO05D002423 1.7e-06 56.6 160 27.5
Os07g0519100 Oryza sativa ssp. japonica HOM05D000287 ORTHO05D002423 2.2e-06 56.2 120 28.3
GSVIVG01002375001 Vitis vinifera HOM05D000287 ORTHO05D002423 2.2e-06 56.2 131 28.2
HanXRQChr15g0471151 Helianthus annuus HOM05D000287 ORTHO05D002423 2.9e-06 55.8 124 28.2
SEGI_07129 Sequoiadendron giganteum HOM05D000287 ORTHO05D000319 2.9e-06 55.8 123 29.3
Sed0003935 Sechium edule HOM05D000287 ORTHO05D002423 3.8e-06 55.5 130 28.5
SEGI_24884 Sequoiadendron giganteum HOM05D000287 ORTHO05D000319 4.9e-06 55.1 123 31.7
PSO170G5496 Papaver somniferum HOM05D000287 ORTHO05D000319 6.5e-06 54.7 113 35.4
Potri.004G017700 Populus trichocarpa HOM05D000287 ORTHO05D002423 6.5e-06 54.7 119 26.9
TPR.G28807 Trifolium pratense HOM05D000287 ORTHO05D002423 8.4e-06 54.3 118 28.8


User provided reference genes

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