Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1127G180 Amborella trichopoda HOM05D007287 ORTHO05D008965 6.3e-157 557.4 277 100.0
Dinv16928 Davidia involucrata HOM05D007287 ORTHO05D008965 4.1e-15 86.3 258 33.7
MBI15_g22001_MAGBIO Magnolia biondii HOM05D007287 ORTHO05D008965 2.0e-14 84.0 288 31.2
Nn5g26760 Nelumbo nucifera HOM05D007287 ORTHO05D008965 8.6e-13 78.6 272 32.4
CSS0027605 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 1.1e-12 78.2 249 32.1
CSS0006882 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 1.9e-12 77.4 256 31.2
Rhsim04G0120200 Rhododendron simsii HOM05D007287 ORTHO05D008965 2.5e-12 77.0 264 30.7
TAR633G2304 Trochodendron aralioides HOM05D007287 ORTHO05D008965 2.5e-12 77.0 253 31.2
MBI15_g05588_MAGBIO Magnolia biondii HOM05D007287 ORTHO05D008965 7.3e-12 75.5 248 31.0
PGSC0003DMG400020867 Solanum tuberosum HOM05D007287 ORTHO05D008965 3.6e-11 73.2 256 31.6
Nitab4.5_0002785g0030 Nicotiana tabacum HOM05D007287 ORTHO05D008965 4.7e-11 72.8 276 29.3
vmacro08958 Vaccinium macrocarpon HOM05D007287 ORTHO05D008965 4.7e-11 72.8 245 31.0
PSO339G4161 Papaver somniferum HOM05D007287 ORTHO05D008965 3.0e-10 70.1 243 29.6
Peaxi162Scf00732g00008 Petunia axillaris HOM05D007287 ORTHO05D008965 5.2e-10 69.3 269 29.4
GSVIVG01029850001 Vitis vinifera HOM05D007287 ORTHO05D008965 8.9e-10 68.6 248 31.0
AUR62006459 Chenopodium quinoa HOM05D007287 ORTHO05D008965 1.5e-09 67.8 252 31.3
ECA248G0550 Erigeron canadensis HOM05D007287 ORTHO05D008965 2.0e-09 67.4 254 28.7
PSO384G1025 Papaver somniferum HOM05D007287 ORTHO05D008965 2.0e-09 67.4 265 27.5
MSTRG.26833 Avicennia marina HOM05D007287 ORTHO05D008965 5.7e-09 65.9 258 29.1
Nitab4.5_0000356g0060 Nicotiana tabacum HOM05D007287 ORTHO05D008965 5.7e-09 65.9 258 28.7
CAN.G616.24 Capsicum annuum HOM05D007287 ORTHO05D008965 9.8e-09 65.1 244 29.9
EL10Ac6g15481 Beta vulgaris HOM05D007287 ORTHO05D008965 1.3e-08 64.7 251 30.3
Manes.08G167300 Manihot esculenta HOM05D007287 ORTHO05D008965 1.3e-08 64.7 280 27.9
Oeu039292.1 Olea europaea HOM05D007287 ORTHO05D008965 1.7e-08 64.3 253 28.5
Ah.02g119260 Amaranthus hybridus HOM05D007287 ORTHO05D008965 2.2e-08 63.9 243 28.4
AUR62029815 Chenopodium quinoa HOM05D007287 ORTHO05D008965 2.9e-08 63.5 252 30.6
Haze_21214 Corylus avellana HOM05D007287 ORTHO05D008965 2.9e-08 63.5 252 29.0
Sopen09g026010 Solanum pennellii HOM05D007287 ORTHO05D008965 4.9e-08 62.8 247 30.0
Thecc.04G001200 Theobroma cacao HOM05D007287 ORTHO05D008965 6.4e-08 62.4 271 27.7
Ciclev10012636m.g Citrus clementina HOM05D007287 ORTHO05D008965 8.3e-08 62.0 197 31.5
Lsat_1_v5_gn_5_153761 Lactuca sativa HOM05D007287 ORTHO05D008965 1.1e-07 61.6 254 27.6
Sabra04G0158300 Salix brachista HOM05D007287 ORTHO05D008965 1.4e-07 61.2 249 29.3
Cfa016991 Carpinus fangiana HOM05D007287 ORTHO05D008965 1.8e-07 60.8 252 29.0
Solyc09g031900.4 Solanum lycopersicum HOM05D007287 ORTHO05D008965 1.8e-07 60.8 251 30.3
Potri.016G142100 Populus trichocarpa HOM05D007287 ORTHO05D008965 7.0e-07 58.9 249 29.7
Manes.09G120600 Manihot esculenta HOM05D007287 ORTHO05D008965 9.2e-07 58.5 281 28.5
Duzib268G0768 Durio zibethinus HOM05D007287 ORTHO05D008965 2.0e-06 57.4 200 29.0
SGA_v2.0_scaffold240G44057 Striga asiatica HOM05D007287 ORTHO05D008965 2.0e-06 57.4 196 30.6
HanXRQChr11g0345021 Helianthus annuus HOM05D007287 ORTHO05D008965 3.5e-06 56.6 245 26.5
Sabra06G0087700 Salix brachista HOM05D007287 ORTHO05D008965 5.9e-06 55.8 248 29.4
Sc20g0007340 Simmondsia chinensis HOM05D007287 ORTHO05D008965 5.9e-06 55.8 258 27.5
Sc20g0007530 Simmondsia chinensis HOM05D007287 ORTHO05D008965 5.9e-06 55.8 258 27.5
Atru.chr8.50 Acer truncatum HOM05D007287 ORTHO05D008965 7.8e-06 55.5 285 26.0


User provided reference genes

Program Settings