Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1127G111 Amborella trichopoda HOM05D007102 ORTHO05D008950 3.9e-113 411.4 196 100.0
CDE07G1209 Ceratophyllum demersum HOM05D007102 ORTHO05D008950 2.7e-77 292.4 174 79.3
Aqoxy5G01440 Aquilegia oxysepala HOM05D007102 ORTHO05D008950 4.6e-77 291.6 185 77.8
PSO266G0014 Papaver somniferum HOM05D007102 ORTHO05D008950 1.3e-76 290.0 176 77.3
Nn2g10214 Nelumbo nucifera HOM05D007102 ORTHO05D008950 2.3e-76 289.3 166 79.5
PSO384G1696 Papaver somniferum HOM05D007102 ORTHO05D008950 3.9e-76 288.5 164 81.7
ECA236G5009 Erigeron canadensis HOM05D007102 ORTHO05D008950 1.1e-75 287.0 180 77.2
Manes.18G123900 Manihot esculenta HOM05D007102 ORTHO05D008950 1.1e-75 287.0 162 82.1
Lsat_1_v5_gn_8_99200 Lactuca sativa HOM05D007102 ORTHO05D008950 1.5e-75 286.6 164 82.9
Nitab4.5_0007585g0040 Nicotiana tabacum HOM05D007102 ORTHO05D008950 5.6e-75 284.6 153 86.9
Peaxi162Scf00788g00047 Petunia axillaris HOM05D007102 ORTHO05D008950 5.6e-75 284.6 153 86.3
Sed0015928 Sechium edule HOM05D007102 ORTHO05D008950 5.6e-75 284.6 158 83.5
CSS0027114 Camellia sinensis var. sinensis HOM05D007102 ORTHO05D008950 7.3e-75 284.3 151 88.1
HanXRQChr16g0508431 Helianthus annuus HOM05D007102 ORTHO05D008950 7.3e-75 284.3 160 83.1
TAR624G0943 Trochodendron aralioides HOM05D007102 ORTHO05D008950 9.5e-75 283.9 149 85.9
CANSAT54G0300 Cannabis sativa HOM05D007102 ORTHO05D008950 1.2e-74 283.5 155 85.8
Nitab4.5_0001856g0010 Nicotiana tabacum HOM05D007102 ORTHO05D008950 1.2e-74 283.5 153 86.3
Dinv12295 Davidia involucrata HOM05D007102 ORTHO05D008950 1.6e-74 283.1 148 89.2
CiPaw.13G061600 Carya illinoinensis HOM05D007102 ORTHO05D008950 2.8e-74 282.3 143 90.9
Solyc09g083150.4 Solanum lycopersicum HOM05D007102 ORTHO05D008950 2.8e-74 282.3 153 85.0
Sopen09g032040 Solanum pennellii HOM05D007102 ORTHO05D008950 2.8e-74 282.3 153 85.0
Hma1.2p1_0170F.1_g075400 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 4.7e-74 281.6 175 76.6
vmacro14656 Vaccinium macrocarpon HOM05D007102 ORTHO05D008950 4.7e-74 281.6 148 86.5
QL01p023619 Quercus lobata HOM05D007102 ORTHO05D008950 6.2e-74 281.2 160 80.0
PGSC0003DMG400006084 Solanum tuberosum HOM05D007102 ORTHO05D008950 6.2e-74 281.2 153 84.3
Cpa.g.sc2.262 Carica papaya HOM05D007102 ORTHO05D008950 8.0e-74 280.8 158 80.4
ClCG02G018940 Citrullus lanatus HOM05D007102 ORTHO05D008950 1.1e-73 280.4 180 74.4
CsaV3_6G013250 Cucumis sativus L. HOM05D007102 ORTHO05D008950 1.1e-73 280.4 143 90.2
Lj2C1106T0 Lonicera japonica HOM05D007102 ORTHO05D008950 1.1e-73 280.4 150 86.0
Cc01_g08950 Coffea canephora HOM05D007102 ORTHO05D008950 1.4e-73 280.0 151 84.8
Migut.D00799 Erythranthe guttata HOM05D007102 ORTHO05D008950 1.4e-73 280.0 189 69.8
MELO3C019595.2 Cucumis melo HOM05D007102 ORTHO05D008950 1.8e-73 279.6 183 73.8
Oeu005352.1 Olea europaea HOM05D007102 ORTHO05D008950 2.3e-73 279.3 186 72.6
PGR042G3056 Punica granatum HOM05D007102 ORTHO05D008950 3.1e-73 278.9 150 84.7
GSVIVG01024526001 Vitis vinifera HOM05D007102 ORTHO05D008950 3.1e-73 278.9 143 88.8
DCAR_021104 Daucus carota HOM05D007102 ORTHO05D008950 4.0e-73 278.5 148 85.8
CAN.G749.40 Capsicum annuum HOM05D007102 ORTHO05D008950 6.8e-73 277.7 153 84.3
Ca_15087_v3 Cicer arietinum L. HOM05D007102 ORTHO05D008950 6.8e-73 277.7 159 79.9
Duzib168G2173 Durio zibethinus HOM05D007102 ORTHO05D008950 8.9e-73 277.3 175 75.4
Atru.chr10.2354 Acer truncatum HOM05D007102 ORTHO05D008950 1.5e-72 276.6 199 70.4
Eucgr.J01847 Eucalyptus grandis HOM05D007102 ORTHO05D008950 1.5e-72 276.6 143 86.7
Zm00001eb145680 Zea mays HOM05D007102 ORTHO05D008950 1.5e-72 276.6 179 73.2
MSTRG.21273 Avicennia marina HOM05D007102 ORTHO05D008950 2.6e-72 275.8 147 87.1
Haze_24461 Corylus avellana HOM05D007102 ORTHO05D008950 2.6e-72 275.8 157 79.6
Gohir.D13G017200 Gossypium hirsutum HOM05D007102 ORTHO05D008950 2.6e-72 275.8 160 79.4
Lalb_Chr20g0117241 Lupinus albus HOM05D007102 ORTHO05D008950 2.6e-72 275.8 143 88.1
Os01g0882500 Oryza sativa ssp. japonica HOM05D007102 ORTHO05D008950 2.6e-72 275.8 180 71.1
Thecc.09G366000 Theobroma cacao HOM05D007102 ORTHO05D008950 2.6e-72 275.8 187 72.2
MD11G1049700 Malus domestica HOM05D007102 ORTHO05D008950 3.4e-72 275.4 154 81.8
Psat5g145240 Pisum sativum HOM05D007102 ORTHO05D008950 3.4e-72 275.4 150 86.0
Prupe.6G038400 Prunus persica HOM05D007102 ORTHO05D008950 3.4e-72 275.4 149 84.6
Rhsim01G0245100 Rhododendron simsii HOM05D007102 ORTHO05D008950 3.4e-72 275.4 148 84.5
Glyma.11G201200 Glycine max HOM05D007102 ORTHO05D008950 4.4e-72 275.0 147 85.7
Glyma.18G049600 Glycine max HOM05D007102 ORTHO05D008950 4.4e-72 275.0 147 85.7
Actinidia23827 Actinidia chinensis HOM05D007102 ORTHO05D008950 5.8e-72 274.6 143 88.1
MD03G1047200 Malus domestica HOM05D007102 ORTHO05D008950 5.8e-72 274.6 148 84.5
Cfa011824 Carpinus fangiana HOM05D007102 ORTHO05D008950 7.5e-72 274.2 143 86.7
Medtr3g062890 Medicago truncatula HOM05D007102 ORTHO05D008950 7.5e-72 274.2 150 84.7
Gorai.013G019100 Gossypium raimondii HOM05D007102 ORTHO05D008950 9.8e-72 273.9 164 76.8
Potri.013G160600 Populus trichocarpa HOM05D007102 ORTHO05D008950 9.8e-72 273.9 149 85.2
TPR.G13817 Trifolium pratense HOM05D007102 ORTHO05D008950 9.8e-72 273.9 143 87.4
TWI31G0907 Tripterygium wilfordii HOM05D007102 ORTHO05D008950 9.8e-72 273.9 143 87.4
unitig_0.g217 Utricularia gibba HOM05D007102 ORTHO05D008950 9.8e-72 273.9 151 82.1
FvH4_3g41140 Fragaria vesca HOM05D007102 ORTHO05D008950 1.3e-71 273.5 142 87.3
FAN16G1418 Fragaria x ananassa HOM05D007102 ORTHO05D008950 1.3e-71 273.5 142 87.3
FAN21G1718 Fragaria x ananassa HOM05D007102 ORTHO05D008950 1.3e-71 273.5 142 87.3
MBI15_g05591_MAGBIO Magnolia biondii HOM05D007102 ORTHO05D008950 1.7e-71 273.1 205 66.8
RcHm_v2.0_Chr5g0073911 Rosa chinensis HOM05D007102 ORTHO05D008950 1.7e-71 273.1 142 87.3
FAN25G2933 Fragaria x ananassa HOM05D007102 ORTHO05D008950 2.9e-71 272.3 140 88.6
Lj6g0026798 Lotus japonicus HOM05D007102 ORTHO05D008950 2.9e-71 272.3 143 88.1
Sabra13G0128500 Salix brachista HOM05D007102 ORTHO05D008950 3.7e-71 271.9 149 84.6
BcaB01g04483 Brassica carinata HOM05D007102 ORTHO05D008950 4.9e-71 271.6 193 68.4
Ciclev10002429m.g Citrus clementina HOM05D007102 ORTHO05D008950 6.4e-71 271.2 160 77.5
Sp6g19920 Schrenkiella parvula HOM05D007102 ORTHO05D008950 1.1e-70 270.4 159 74.8
BcaB01g04537 Brassica carinata HOM05D007102 ORTHO05D008950 1.9e-70 269.6 159 76.1
BcaB01g04546 Brassica carinata HOM05D007102 ORTHO05D008950 1.9e-70 269.6 159 76.1
BolC3t13892H Brassica oleracea HOM05D007102 ORTHO05D008950 1.9e-70 269.6 159 76.1
A03p12340 Brassica napus HOM05D007102 ORTHO05D008950 2.4e-70 269.2 159 75.5
C03p14490 Brassica napus HOM05D007102 ORTHO05D008950 2.4e-70 269.2 159 75.5
BraA03t10546Z Brassica rapa HOM05D007102 ORTHO05D008950 2.4e-70 269.2 159 75.5
THA.LOC104819153 Tarenaya hassleriana HOM05D007102 ORTHO05D008950 2.4e-70 269.2 146 82.2
CARHR272050 Cardamine hirsuta HOM05D007102 ORTHO05D008950 4.1e-70 268.5 147 82.3
AL8G34360 Arabidopsis lyrata HOM05D007102 ORTHO05D008950 7.0e-70 267.7 159 76.1
EL10Ac1g01074 Beta vulgaris HOM05D007102 ORTHO05D008950 9.2e-70 267.3 157 77.7
AT5G58260 Arabidopsis thaliana HOM05D007102 ORTHO05D008950 2.1e-69 266.2 161 75.8
Carub.0008s1880 Capsella rubella HOM05D007102 ORTHO05D008950 2.1e-69 266.2 155 77.4
VMungo0540G2371 Vigna mungo HOM05D007102 ORTHO05D008950 2.1e-69 266.2 147 82.3
Phvul.006G081700 Phaseolus vulgaris HOM05D007102 ORTHO05D008950 1.7e-68 263.1 147 83.0
AUR62027864 Chenopodium quinoa HOM05D007102 ORTHO05D008950 3.0e-68 262.3 158 75.9
AUR62019027 Chenopodium quinoa HOM05D007102 ORTHO05D008950 3.9e-68 261.9 158 76.6
Ah.05g170720 Amaranthus hybridus HOM05D007102 ORTHO05D008950 1.5e-67 260.0 150 79.3
arahy.Tifrunner.gnm1.ann1.6T6LBL Arachis hypogaea HOM05D007102 ORTHO05D008950 4.0e-65 251.9 143 83.2
Gohir.A13G016100 Gossypium hirsutum HOM05D007102 ORTHO05D008950 3.7e-63 245.4 140 79.3
Hma1.2p1_0170F.1_g075390 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 2.5e-59 232.6 148 73.6
Mapoly0073s0080 Marchantia polymorpha HOM05D007102 ORTHO05D008950 1.6e-58 229.9 173 64.7
Hund16865 Selenicereus undatus HOM05D007102 ORTHO05D008950 6.2e-58 228.0 139 77.7
Pp3c3_15360 Physcomitrium patens HOM05D007102 ORTHO05D008950 1.8e-57 226.5 142 71.8
Aa31LG11G50 Aethionema arabicum HOM05D007102 ORTHO05D008950 2.6e-56 222.6 141 72.3
COL.COLO4_11231 Corchorus olitorius HOM05D007102 ORTHO05D008950 2.7e-53 212.6 116 84.5
SMO119G0373 Selaginella moellendorffii HOM05D007102 ORTHO05D008950 8.1e-50 201.1 141 63.1
SEGI_29953 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 3.1e-49 199.1 133 66.2
FAN11G2493 Fragaria x ananassa HOM05D007102 ORTHO05D008950 4.3e-43 178.7 142 63.4
Actinidia34510 Actinidia chinensis HOM05D007102 ORTHO05D008950 1.6e-42 176.8 91 87.9
Pp3c10_12660 Physcomitrium patens HOM05D007102 ORTHO05D008950 8.1e-42 174.5 128 64.1
arahy.Tifrunner.gnm1.ann1.S4JT24 Arachis hypogaea HOM05D007102 ORTHO05D008950 1.4e-30 137.1 143 53.1
Thhalv10014691m.g Eutrema salsugineum HOM05D007102 ORTHO05D008950 2.7e-29 132.9 80 72.5
CBR_g36846 Chara braunii HOM05D007102 ORTHO05D008950 2.1e-26 123.2 148 43.2
Haze_24494 Corylus avellana HOM05D007102 ORTHO05D008950 1.6e-18 97.1 122 41.8
CiPaw.13G061300 Carya illinoinensis HOM05D007102 ORTHO05D008950 1.1e-14 84.3 42 88.1
A10p15960 Brassica napus HOM05D007102 ORTHO05D008950 3.1e-09 66.2 48 58.3


User provided reference genes

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