Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1127G045 Amborella trichopoda HOM05D003400 ORTHO05D003687 1.7e-260 902.1 456 100.0
TAR369G0853 Trochodendron aralioides HOM05D003400 ORTHO05D003687 1.4e-47 194.9 446 38.3
Potri.019G058200 Populus trichocarpa HOM05D003400 ORTHO05D003687 4.3e-46 189.9 364 38.7
TAR633G0453 Trochodendron aralioides HOM05D003400 ORTHO05D003687 5.7e-46 189.5 404 38.1
Hma1.2p1_0264F.1_g106160 Hydrangea macrophylla HOM05D003400 ORTHO05D003687 2.2e-45 187.6 422 35.3
TAR623G0519 Trochodendron aralioides HOM05D003400 ORTHO05D003687 2.8e-45 187.2 379 36.7
Oeu063984.1 Olea europaea HOM05D003400 ORTHO05D003687 6.3e-45 186.0 426 36.4
Sabra19G0073600 Salix brachista HOM05D003400 ORTHO05D003687 8.2e-45 185.7 397 38.0
Cc02_g05370 Coffea canephora HOM05D003400 ORTHO05D003687 1.1e-44 185.3 349 39.3
MBI15_g01598_MAGBIO Magnolia biondii HOM05D003400 ORTHO05D003687 1.2e-43 181.8 358 39.4
Sopen06g015320 Solanum pennellii HOM05D003400 ORTHO05D003687 1.2e-43 181.8 427 35.6
Actinidia13648 Actinidia chinensis HOM05D003400 ORTHO05D003687 1.5e-43 181.4 368 38.6
Peaxi162Scf00739g00321 Petunia axillaris HOM05D003400 ORTHO05D003687 3.4e-43 180.3 379 36.7
Solyc06g048970.3 Solanum lycopersicum HOM05D003400 ORTHO05D003687 4.5e-43 179.9 427 35.4
AUR62024934 Chenopodium quinoa HOM05D003400 ORTHO05D003687 5.9e-43 179.5 384 36.2
Lalb_Chr24g0402681 Lupinus albus HOM05D003400 ORTHO05D003687 5.9e-43 179.5 413 35.8
Nitab4.5_0002745g0010 Nicotiana tabacum HOM05D003400 ORTHO05D003687 7.7e-43 179.1 377 37.4
Nitab4.5_0000171g0020 Nicotiana tabacum HOM05D003400 ORTHO05D003687 1.0e-42 178.7 377 37.7
Actinidia31626 Actinidia chinensis HOM05D003400 ORTHO05D003687 1.3e-42 178.3 348 40.5
Lj1C967G2 Lonicera japonica HOM05D003400 ORTHO05D003687 1.3e-42 178.3 369 37.1
Nn5g26847 Nelumbo nucifera HOM05D003400 ORTHO05D003687 1.3e-42 178.3 369 35.8
PGSC0003DMG400016640 Solanum tuberosum HOM05D003400 ORTHO05D003687 1.7e-42 177.9 425 35.1
Dinv21846 Davidia involucrata HOM05D003400 ORTHO05D003687 2.2e-42 177.6 413 35.8
SalBow3G2848 Salvia bowleyana HOM05D003400 ORTHO05D003687 2.2e-42 177.6 365 39.2
Lalb_Chr22g0360931 Lupinus albus HOM05D003400 ORTHO05D003687 5.0e-42 176.4 434 33.4
Cpa.g.sc19.58 Carica papaya HOM05D003400 ORTHO05D003687 1.1e-41 175.3 384 38.5
AUR62030610 Chenopodium quinoa HOM05D003400 ORTHO05D003687 1.4e-41 174.9 385 35.8
Thecc.10G181000 Theobroma cacao HOM05D003400 ORTHO05D003687 1.4e-41 174.9 416 36.8
EL10Ac2g02645 Beta vulgaris HOM05D003400 ORTHO05D003687 3.2e-41 173.7 384 34.9
Lj8C54T21 Lonicera japonica HOM05D003400 ORTHO05D003687 5.5e-41 172.9 352 39.2
Hma1.2p1_0292F.1_g115970 Hydrangea macrophylla HOM05D003400 ORTHO05D003687 9.4e-41 172.2 367 38.7
Manes.10G001400 Manihot esculenta HOM05D003400 ORTHO05D003687 9.4e-41 172.2 380 35.0
SGA_v2.0_scaffold44G16620 Striga asiatica HOM05D003400 ORTHO05D003687 9.4e-41 172.2 343 39.7
CiPaw.01G306600 Carya illinoinensis HOM05D003400 ORTHO05D003687 1.2e-40 171.8 376 36.7
DCAR_018037 Daucus carota HOM05D003400 ORTHO05D003687 1.2e-40 171.8 330 38.5
vmacro06891 Vaccinium macrocarpon HOM05D003400 ORTHO05D003687 1.2e-40 171.8 375 35.7
Duzib114G0186 Durio zibethinus HOM05D003400 ORTHO05D003687 1.6e-40 171.4 396 37.1
MSTRG.171 Avicennia marina HOM05D003400 ORTHO05D003687 2.7e-40 170.6 356 39.0
MSTRG.8889 Avicennia marina HOM05D003400 ORTHO05D003687 2.7e-40 170.6 437 35.0
PGR044G0713 Punica granatum HOM05D003400 ORTHO05D003687 2.7e-40 170.6 399 36.1
QL08p064852 Quercus lobata HOM05D003400 ORTHO05D003687 2.7e-40 170.6 406 34.5
Migut.F00607 Erythranthe guttata HOM05D003400 ORTHO05D003687 3.6e-40 170.2 328 40.2
Gohir.A05G403000 Gossypium hirsutum HOM05D003400 ORTHO05D003687 1.0e-39 168.7 452 35.8
PSO170G4360 Papaver somniferum HOM05D003400 ORTHO05D003687 1.4e-39 168.3 357 36.7
CAN.G24.15 Capsicum annuum HOM05D003400 ORTHO05D003687 2.3e-39 167.5 375 37.1
Aqoxy4G02422 Aquilegia oxysepala HOM05D003400 ORTHO05D003687 3.0e-39 167.2 345 36.2
Rhsim03G0152500 Rhododendron simsii HOM05D003400 ORTHO05D003687 3.0e-39 167.2 393 35.1
vmacro09957 Vaccinium macrocarpon HOM05D003400 ORTHO05D003687 3.0e-39 167.2 369 36.6
PSO017G2438 Papaver somniferum HOM05D003400 ORTHO05D003687 6.7e-39 166.0 375 36.3
Gorai.012G014800 Gossypium raimondii HOM05D003400 ORTHO05D003687 1.1e-38 165.2 453 35.1
CSS0037757 Camellia sinensis var. sinensis HOM05D003400 ORTHO05D003687 1.5e-38 164.9 366 36.9
Glyma.14G117500 Glycine max HOM05D003400 ORTHO05D003687 1.5e-38 164.9 423 34.0
Eucgr.J00113 Eucalyptus grandis HOM05D003400 ORTHO05D003687 2.0e-38 164.5 419 33.9
Rhsim03G0152100 Rhododendron simsii HOM05D003400 ORTHO05D003687 2.0e-38 164.5 403 34.7
COL.COLO4_19367 Corchorus olitorius HOM05D003400 ORTHO05D003687 2.6e-38 164.1 425 35.3
DCAR_029743 Daucus carota HOM05D000792 ORTHO05D004195 2.6e-38 164.1 367 33.8
Gohir.D04G012500 Gossypium hirsutum HOM05D003400 ORTHO05D003687 4.4e-38 163.3 453 35.1
Actinidia07793 Actinidia chinensis HOM05D003400 ORTHO05D003687 5.7e-38 162.9 383 37.1
Manes.07G141701 Manihot esculenta HOM05D003400 ORTHO05D003687 5.7e-38 162.9 426 34.5
Manes.07G143400 Manihot esculenta HOM05D003400 ORTHO05D003687 5.7e-38 162.9 427 34.7
Nn2g10302 Nelumbo nucifera HOM05D003400 ORTHO05D003687 5.7e-38 162.9 356 36.8
Gohir.D05G280400 Gossypium hirsutum HOM05D003400 ORTHO05D003687 7.4e-38 162.5 406 34.2
TWI53G0017 Tripterygium wilfordii HOM05D003400 ORTHO05D003687 9.7e-38 162.2 425 32.2
Hund15817 Selenicereus undatus HOM05D003400 ORTHO05D003687 1.3e-37 161.8 395 33.4
Atru.chr12.183 Acer truncatum HOM05D003400 ORTHO05D003687 2.2e-37 161.0 377 35.3
Os02g0132200 Oryza sativa ssp. japonica HOM05D003400 ORTHO05D003687 2.2e-37 161.0 421 33.7
Glyma.17G191500 Glycine max HOM05D003400 ORTHO05D003687 2.8e-37 160.6 374 35.8
SGA_v2.0_scaffold60G20888 Striga asiatica HOM05D003400 ORTHO05D003687 2.8e-37 160.6 313 38.7
Gorai.009G293800 Gossypium raimondii HOM05D003400 ORTHO05D003687 4.8e-37 159.8 406 34.5
arahy.Tifrunner.gnm1.ann1.JMN63H Arachis hypogaea HOM05D003400 ORTHO05D003687 1.1e-36 158.7 374 33.7
Lj1g0015659 Lotus japonicus HOM05D003400 ORTHO05D003687 1.1e-36 158.7 370 35.7
arahy.Tifrunner.gnm1.ann1.45IBUQ Arachis hypogaea HOM05D003400 ORTHO05D003687 1.4e-36 158.3 374 33.7
MBI03_g15591_MAGBIO Magnolia biondii HOM05D003400 ORTHO05D003687 1.4e-36 158.3 377 36.3
Psat6g036400 Pisum sativum HOM05D003400 ORTHO05D003687 1.4e-36 158.3 355 34.9
GSVIVG01032673001 Vitis vinifera HOM05D003400 ORTHO05D003687 1.8e-36 157.9 352 36.6
Duzib106G2049 Durio zibethinus HOM05D003400 ORTHO05D003687 2.4e-36 157.5 381 36.2
MD07G1233700 Malus domestica HOM05D003400 ORTHO05D003687 2.4e-36 157.5 435 32.6
TWI09G1099 Tripterygium wilfordii HOM05D003400 ORTHO05D003687 2.4e-36 157.5 421 33.3
Haze_17357 Corylus avellana HOM05D003400 ORTHO05D003687 4.1e-36 156.8 384 34.4
CANSAT21G0473 Cannabis sativa HOM05D003400 ORTHO05D003687 2.0e-35 154.5 349 35.2
Ciclev10030981m.g Citrus clementina HOM05D003400 ORTHO05D003687 2.0e-35 154.5 404 33.4
CDE04G0272 Ceratophyllum demersum HOM05D003400 ORTHO05D003687 2.6e-35 154.1 375 34.4
Prupe.2G264100 Prunus persica HOM05D003400 ORTHO05D003687 2.6e-35 154.1 446 33.6
Ca_03351_v3 Cicer arietinum L. HOM05D003400 ORTHO05D003687 3.5e-35 153.7 363 33.1
Migut.F01244 Erythranthe guttata HOM05D003400 ORTHO05D003687 3.5e-35 153.7 309 37.5
CANSAT21G1871 Cannabis sativa HOM05D003400 ORTHO05D003687 4.5e-35 153.3 413 33.2
Rhsim09G0185900 Rhododendron simsii HOM05D003400 ORTHO05D003687 1.0e-34 152.1 374 35.6
VMungo0647G2516 Vigna mungo HOM05D003400 ORTHO05D003687 1.7e-34 151.4 420 33.1
ClCG07G005110 Citrullus lanatus HOM05D003400 ORTHO05D003687 2.9e-34 150.6 383 32.1
ECA232G0413 Erigeron canadensis HOM05D003400 ORTHO05D003687 2.9e-34 150.6 373 34.0
EL10Ac3g07235 Beta vulgaris HOM05D003400 ORTHO05D003687 3.8e-34 150.2 415 32.3
Sed0002948 Sechium edule HOM05D003400 ORTHO05D003687 3.8e-34 150.2 380 35.8
MELO3C020148.2 Cucumis melo HOM05D003400 ORTHO05D003687 5.0e-34 149.8 405 34.3
HanXRQChr08g0221571 Helianthus annuus HOM05D003400 ORTHO05D003687 5.0e-34 149.8 350 36.6
Gohir.A05G278600 Gossypium hirsutum HOM05D003400 ORTHO05D003687 8.5e-34 149.1 292 37.0
MD01G1167700 Malus domestica HOM05D003400 ORTHO05D003687 1.4e-33 148.3 415 32.5
TPR.G24491 Trifolium pratense HOM05D003400 ORTHO05D003687 1.9e-33 147.9 390 34.4
CsaV3_5G010950 Cucumis sativus L. HOM05D003400 ORTHO05D003687 2.5e-33 147.5 397 32.7
FvH4_7g25930 Fragaria vesca HOM05D003400 ORTHO05D003687 2.5e-33 147.5 426 33.1
PSO384G0897 Papaver somniferum HOM05D003400 ORTHO05D003687 2.5e-33 147.5 437 34.1
Phvul.001G062900 Phaseolus vulgaris HOM05D003400 ORTHO05D003687 2.5e-33 147.5 355 34.1
ECA233G0468 Erigeron canadensis HOM05D003400 ORTHO05D003687 7.2e-33 146.0 417 31.4
Medtr1g007460 Medicago truncatula HOM05D003400 ORTHO05D003687 7.2e-33 146.0 358 32.4
PSO339G6613 Papaver somniferum HOM05D003400 ORTHO05D003687 7.2e-33 146.0 439 33.3
THA.LOC104823169 Tarenaya hassleriana HOM05D003400 ORTHO05D003687 9.4e-33 145.6 358 35.2
FAN06G1869 Fragaria x ananassa HOM05D003400 ORTHO05D003687 1.2e-32 145.2 426 32.9
Lsat_1_v5_gn_9_60041 Lactuca sativa HOM05D003400 ORTHO05D003687 1.2e-32 145.2 412 30.6
FAN03G2499 Fragaria x ananassa HOM05D003400 ORTHO05D003687 1.6e-32 144.8 433 32.1
FAN01G0709 Fragaria x ananassa HOM05D003400 ORTHO05D003687 3.6e-32 143.7 428 32.2
Hund13449 Selenicereus undatus HOM05D003400 ORTHO05D003687 3.6e-32 143.7 418 31.6
FAN10G0615 Fragaria x ananassa HOM05D003400 ORTHO05D003687 1.8e-31 141.4 434 32.7
RcHm_v2.0_Chr1g0372301 Rosa chinensis HOM05D003400 ORTHO05D003687 5.2e-31 139.8 419 32.2
Sp6g37590 Schrenkiella parvula HOM05D003400 ORTHO05D003687 8.8e-31 139.0 359 35.4
THA.LOC104816509 Tarenaya hassleriana HOM05D003400 ORTHO05D003687 2.6e-30 137.5 355 34.6
C09p71460 Brassica napus HOM05D003400 ORTHO05D003687 5.7e-30 136.3 373 35.7
BolC9t59909H Brassica oleracea HOM05D003400 ORTHO05D003687 5.7e-30 136.3 373 35.7
Ca_12768_v3 Cicer arietinum L. HOM05D003400 ORTHO05D003687 9.7e-30 135.6 359 31.8
Zm00001eb231310 Zea mays HOM05D003400 ORTHO05D003687 9.7e-30 135.6 354 33.6
BcaB05g21725 Brassica carinata HOM05D003400 ORTHO05D003687 1.3e-29 135.2 350 33.7
A10p30950 Brassica napus HOM05D003400 ORTHO05D003687 1.1e-28 132.1 377 34.2
BraA10t45140Z Brassica rapa HOM05D003400 ORTHO05D003687 1.1e-28 132.1 377 34.2
Thhalv10013224m.g Eutrema salsugineum HOM05D003400 ORTHO05D003687 1.1e-28 132.1 374 32.4
CARHR207990 Cardamine hirsuta HOM05D003400 ORTHO05D003687 9.1e-28 129.0 350 35.7
Carub.0006s0417 Capsella rubella HOM05D003400 ORTHO05D003687 2.6e-27 127.5 382 32.7
Sc14g0005640 Simmondsia chinensis HOM05D003400 ORTHO05D003687 3.5e-27 127.1 273 37.4
unitig_37.g12474 Utricularia gibba HOM05D003400 ORTHO05D003687 4.5e-27 126.7 303 35.0
Sed0014609 Sechium edule HOM05D003400 ORTHO05D003687 5.9e-27 126.3 407 32.2
Potri.013G091100 Populus trichocarpa HOM05D003400 ORTHO05D003687 1.0e-26 125.6 361 31.3
BcaC06g32233 Brassica carinata HOM05D003400 ORTHO05D003687 1.7e-26 124.8 338 36.4
Aa31LG11G6090 Aethionema arabicum HOM05D003400 ORTHO05D003687 3.8e-26 123.6 363 33.6
Lsat_1_v5_gn_8_11440 Lactuca sativa HOM05D003400 ORTHO05D003687 5.0e-26 123.2 324 32.7
BolC2t06192H Brassica oleracea HOM05D003400 ORTHO05D003687 8.5e-26 122.5 345 32.8
AT5G05240 Arabidopsis thaliana HOM05D003400 ORTHO05D003687 1.1e-25 122.1 375 31.7
BcaC03g13153 Brassica carinata HOM05D003400 ORTHO05D003687 1.9e-25 121.3 341 34.0
C02p02230 Brassica napus HOM05D003400 ORTHO05D003687 1.9e-25 121.3 359 32.0
DCAR_020152 Daucus carota HOM05D003400 ORTHO05D003687 2.5e-25 120.9 417 29.5
BraA02t04839Z Brassica rapa HOM05D003400 ORTHO05D003687 2.1e-24 117.9 342 31.9
HPP92_024977 Vanilla planifolia HOM05D003400 ORTHO05D003687 2.7e-24 117.5 349 29.5
CiPaw.13G063500 Carya illinoinensis HOM05D003400 ORTHO05D003687 1.4e-23 115.2 331 32.3
AL6G15080 Arabidopsis lyrata HOM05D003400 ORTHO05D003687 5.2e-23 113.2 352 32.7
TAR636G0727 Trochodendron aralioides HOM05D003400 ORTHO05D003687 6.7e-23 112.8 213 39.9
Oeu006054.1 Olea europaea HOM05D003400 ORTHO05D003687 4.4e-22 110.2 136 46.3
THA.LOC104813796 Tarenaya hassleriana HOM05D003400 ORTHO05D003687 2.2e-21 107.8 297 35.0
Dinv34484 Davidia involucrata HOM05D003400 ORTHO05D003687 2.8e-21 107.5 359 30.9
Aa31LG3G1490 Aethionema arabicum HOM05D003400 ORTHO05D003687 3.7e-21 107.1 353 28.0
SEGI_16914 Sequoiadendron giganteum HOM05D003400 ORTHO05D003687 1.2e-19 102.1 331 30.2
Aqoxy2G00693 Aquilegia oxysepala HOM05D003400 ORTHO05D003687 5.9e-19 99.8 303 30.0
QL01p024561 Quercus lobata HOM05D003400 ORTHO05D003687 1.5e-17 95.1 340 27.9
Haze_24472 Corylus avellana HOM05D003400 ORTHO05D003687 3.2e-17 94.0 357 28.9
AL4G38500 Arabidopsis lyrata HOM05D003400 ORTHO05D003687 9.4e-17 92.4 352 27.8
AT2G40630 Arabidopsis thaliana HOM05D003400 ORTHO05D003687 1.6e-16 91.7 450 24.2
Sp4g22960 Schrenkiella parvula HOM05D003400 ORTHO05D003687 3.6e-16 90.5 348 25.9
Thhalv10016481m.g Eutrema salsugineum HOM05D003400 ORTHO05D003687 4.7e-16 90.1 344 26.7
C03p27090 Brassica napus HOM05D003400 ORTHO05D003687 6.1e-16 89.7 335 26.3
HanXRQChr09g0252221 Helianthus annuus HOM05D003400 ORTHO05D003687 6.1e-16 89.7 108 51.9
MSTRG.8378 Avicennia marina HOM05D003400 ORTHO05D003687 1.8e-15 88.2 128 43.8
BcaC01g05391 Brassica carinata HOM05D003400 ORTHO05D003687 1.8e-15 88.2 335 26.6
A03p22840 Brassica napus HOM05D003400 ORTHO05D003687 2.3e-15 87.8 335 25.7
Carub.0004s2292 Capsella rubella HOM05D003400 ORTHO05D003687 8.8e-15 85.9 354 25.7
BcaC06g32234 Brassica carinata HOM05D003400 ORTHO05D003687 5.7e-14 83.2 121 45.5
Zm00001eb209040 Zea mays HOM05D003400 ORTHO05D003687 2.2e-13 81.3 108 45.4
Actinidia01001 Actinidia chinensis HOM05D003400 ORTHO05D003687 1.1e-12 79.0 161 36.6
BraA03t11508Z Brassica rapa HOM05D003400 ORTHO05D003687 1.4e-12 78.6 324 25.0
unitig_46.g18748 Utricularia gibba HOM05D003400 ORTHO05D003687 1.4e-12 78.6 160 31.2
TAR636G2149 Trochodendron aralioides HOM05D003400 ORTHO05D003687 7.0e-12 76.3 99 47.5
BcaB01g03526 Brassica carinata HOM05D003400 ORTHO05D003687 7.7e-11 72.8 276 25.0
Potri.013G157700 Populus trichocarpa HOM05D003400 ORTHO05D003687 2.3e-10 71.2 294 26.2
Mapoly0081s0073 Marchantia polymorpha HOM05D003400 ORTHO05D003687 7.2e-09 66.2 300 28.0
AagrBONN_evm.TU.Sc2ySwM_344.4066 Anthoceros agrestis HOM05D003400 ORTHO05D003687 1.2e-08 65.5 321 25.2
Actinidia01000 Actinidia chinensis HOM05D003400 ORTHO05D003687 1.0e-07 62.4 118 39.8
BcaC02g07326 Brassica carinata HOM05D003400 ORTHO05D003687 1.8e-07 61.6 333 22.2
Pp3c27_4350 Physcomitrium patens HOM05D027247 ORTHO05D003687 2.3e-07 61.2 97 42.3
BolC4t28345H Brassica oleracea HOM05D003400 ORTHO05D003687 4.0e-07 60.5 333 21.9
CARHR135740 Cardamine hirsuta HOM05D003400 ORTHO05D003687 1.5e-06 58.5 111 34.2
BraA04t18562Z Brassica rapa HOM05D003400 ORTHO05D003687 2.6e-06 57.8 321 20.6
C04p68450 Brassica napus HOM05D003400 ORTHO05D003687 4.4e-06 57.0 104 35.6


User provided reference genes

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