Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1125G121 Amborella trichopoda HOM05D035644 ORTHO05D031088 1.2e-160 569.7 266 100.0
ATR0622G001 Amborella trichopoda HOM05D035644 ORTHO05D031088 4.4e-139 498.0 251 92.8
ATR1125G099 Amborella trichopoda HOM05D035644 ORTHO05D031088 3.0e-124 448.7 257 83.7
ATR1125G110 Amborella trichopoda HOM05D000260 ORTHO05D000318 2.0e-75 286.6 145 91.0
CARHR018990 Cardamine hirsuta HOM05D000260 ORTHO05D000318 1.5e-19 100.9 243 30.5
Actinidia16673 Actinidia chinensis HOM05D000072 ORTHO05D000026 4.2e-17 92.8 257 29.2
Eucgr.B00761 Eucalyptus grandis HOM05D000260 ORTHO05D000318 8.0e-16 88.6 231 28.1
Eucgr.B00770 Eucalyptus grandis HOM05D000260 ORTHO05D000318 1.0e-15 88.2 231 28.1
Eucgr.B00758 Eucalyptus grandis HOM05D000260 ORTHO05D000318 1.5e-14 84.3 227 27.8
TWI60G0982 Tripterygium wilfordii HOM05D000260 ORTHO05D000318 2.6e-14 83.6 236 28.0
Eucgr.B00782 Eucalyptus grandis HOM05D000072 ORTHO05D000026 4.4e-14 82.8 246 26.4
DCAR_025904 Daucus carota HOM05D002670 ORTHO05D003079 5.7e-14 82.4 242 29.8
AL1G30800 Arabidopsis lyrata HOM05D000260 ORTHO05D000318 1.7e-13 80.9 227 28.2
Aa31LG7G3070 Aethionema arabicum HOM05D000260 ORTHO05D000318 3.7e-13 79.7 235 26.8
Oeu057746.1 Olea europaea HOM05D000260 ORTHO05D000318 2.4e-12 77.0 254 29.5
Prupe.1G315900 Prunus persica HOM05D000260 ORTHO05D000318 3.1e-12 76.6 269 26.4
Prupe.1G315000 Prunus persica HOM05D000072 ORTHO05D000026 4.1e-12 76.3 282 25.5
Nitab4.5_0006493g0010 Nicotiana tabacum HOM05D000260 ORTHO05D000318 5.3e-12 75.9 242 28.9
MBI09_g03812_MAGBIO Magnolia biondii HOM05D000072 ORTHO05D000026 1.6e-11 74.3 238 30.7
Atru.chr11.159 Acer truncatum HOM05D000072 ORTHO05D019415 1.0e-10 71.6 256 24.2
Eucgr.B00783 Eucalyptus grandis HOM05D000260 ORTHO05D000318 1.0e-10 71.6 249 24.9
Eucgr.B00748 Eucalyptus grandis HOM05D000260 ORTHO05D000318 1.7e-10 70.9 262 25.6
Sabra04G0065500 Salix brachista HOM05D000260 ORTHO05D000318 2.9e-10 70.1 216 28.2
Lsat_1_v5_gn_2_81040 Lactuca sativa HOM05D000260 ORTHO05D000318 3.8e-10 69.7 243 25.9
arahy.Tifrunner.gnm1.ann1.63GLR8 Arachis hypogaea HOM05D000072 ORTHO05D000165 6.5e-10 68.9 255 25.5
arahy.Tifrunner.gnm1.ann1.NYD0D7 Arachis hypogaea HOM05D000260 ORTHO05D004405 6.5e-10 68.9 248 25.0
COL.COLO4_33401 Corchorus olitorius HOM05D000260 ORTHO05D004405 8.5e-10 68.6 228 26.3
Lsat_1_v5_gn_4_155900 Lactuca sativa HOM05D000260 ORTHO05D000318 8.5e-10 68.6 233 26.6
Glyma.05G237100 Glycine max HOM05D000072 ORTHO05D000026 1.1e-09 68.2 214 24.8
Lj4g0003762 Lotus japonicus HOM05D000072 ORTHO05D000026 1.1e-09 68.2 245 24.5
VMungo1383G1056 Vigna mungo HOM05D000022 ORTHO05D035979 1.5e-09 67.8 235 24.3
ClCG04G010960 Citrullus lanatus HOM05D000072 ORTHO05D000318 1.9e-09 67.4 236 27.1
TWI60G0340 Tripterygium wilfordii HOM05D000260 ORTHO05D000318 1.9e-09 67.4 257 26.1
vmacro18066 Vaccinium macrocarpon HOM05D000260 ORTHO05D000318 1.9e-09 67.4 237 24.9
Cfa015860 Carpinus fangiana HOM05D000260 ORTHO05D004405 2.5e-09 67.0 269 26.8
Carub.0002s1310 Capsella rubella HOM05D000260 ORTHO05D000318 3.2e-09 66.6 224 24.1
Nitab4.5_0003652g0020 Nicotiana tabacum HOM05D000260 ORTHO05D000318 3.2e-09 66.6 246 27.2
Ah.16g101580 Amaranthus hybridus HOM05D000072 ORTHO05D000026 5.5e-09 65.9 251 26.7
Lj5g0005478 Lotus japonicus HOM05D000260 ORTHO05D000318 5.5e-09 65.9 227 24.2
MSTRG.13550 Avicennia marina HOM05D000260 ORTHO05D000318 7.2e-09 65.5 247 30.8
Ciclev10024220m.g Citrus clementina HOM05D000260 ORTHO05D000318 7.2e-09 65.5 206 27.7
MBI09_g25174_MAGBIO Magnolia biondii HOM05D000072 ORTHO05D000026 7.2e-09 65.5 213 24.4
VMungo0720G0248 Vigna mungo HOM05D000260 ORTHO05D000318 7.2e-09 65.5 237 26.6
PSO732G0634 Papaver somniferum HOM05D000022 ORTHO05D000071 9.4e-09 65.1 253 24.5
Cpa.g.sc3.473 Carica papaya HOM05D000260 ORTHO05D000318 1.2e-08 64.7 213 21.6
CiPaw.05G240700 Carya illinoinensis HOM05D000072 ORTHO05D000026 1.2e-08 64.7 215 25.1
Haze_18707 Corylus avellana HOM05D000260 ORTHO05D000318 1.2e-08 64.7 248 27.8
Lj2g0001936 Lotus japonicus HOM05D000260 ORTHO05D000318 1.2e-08 64.7 231 25.1
SalBow8G1282 Salvia bowleyana HOM05D000260 ORTHO05D000318 1.2e-08 64.7 222 25.7
COL.COLO4_07249 Corchorus olitorius HOM05D000260 ORTHO05D000318 2.1e-08 63.9 230 27.0
Medtr1g115485 Medicago truncatula HOM05D000072 ORTHO05D000026 2.1e-08 63.9 229 24.0
Potri.010G121350 Populus trichocarpa HOM05D000072 ORTHO05D000026 2.1e-08 63.9 224 26.3
PGSC0003DMG400026388 Solanum tuberosum HOM05D000072 ORTHO05D000026 2.1e-08 63.9 251 26.7
Zm00001eb124840 Zea mays HOM05D000072 ORTHO05D000026 2.1e-08 63.9 230 23.5
CSS0010175 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D004405 2.7e-08 63.5 264 25.8
FAN07G2609 Fragaria x ananassa HOM05D000072 ORTHO05D022715 2.7e-08 63.5 245 26.5
arahy.Tifrunner.gnm1.ann1.Z64X3Y Arachis hypogaea HOM05D000072 ORTHO05D000026 3.6e-08 63.2 254 24.4
Rhsim10G0069600 Rhododendron simsii HOM05D000260 ORTHO05D000318 3.6e-08 63.2 235 26.8
Psat3g097480 Pisum sativum HOM05D000072 ORTHO05D000026 6.1e-08 62.4 229 26.2
TAR622G0084 Trochodendron aralioides HOM05D000072 ORTHO05D001031 6.1e-08 62.4 235 24.7
VMungo0720G2442 Vigna mungo HOM05D000072 ORTHO05D000026 6.1e-08 62.4 248 25.8
Lj2P833T28 Lonicera japonica HOM05D000260 ORTHO05D004405 8.0e-08 62.0 228 24.1
Eucgr.B00749 Eucalyptus grandis HOM05D000260 ORTHO05D000318 1.0e-07 61.6 128 30.5
Glyma.20G120250 Glycine max HOM05D000260 ORTHO05D004405 1.0e-07 61.6 257 24.1
SalBow8G3654 Salvia bowleyana HOM05D008908 ORTHO05D010362 1.0e-07 61.6 255 26.3
Haze_14174 Corylus avellana HOM05D000072 ORTHO05D000026 1.4e-07 61.2 215 25.1
ECA246G4068 Erigeron canadensis HOM05D000072 ORTHO05D000026 1.4e-07 61.2 232 25.9
Lalb_Chr10g0096441 Lupinus albus HOM05D000260 ORTHO05D000318 1.4e-07 61.2 250 25.2
Carub.0002s1321 Capsella rubella HOM05D000072 ORTHO05D000026 2.3e-07 60.5 226 23.9
EL10Ac4g09717 Beta vulgaris HOM05D000072 ORTHO05D000318 3.0e-07 60.1 229 24.0
Rhsim04G0238600 Rhododendron simsii HOM05D000260 ORTHO05D004405 3.0e-07 60.1 257 25.7
EL10Ac2g04545 Beta vulgaris HOM05D000260 ORTHO05D000318 4.0e-07 59.7 249 23.3
Glyma.08G044200 Glycine max HOM05D000072 ORTHO05D000026 5.2e-07 59.3 283 21.6
SalBow3G4112 Salvia bowleyana HOM05D000260 ORTHO05D000318 5.2e-07 59.3 227 23.8
FAN07G2859 Fragaria x ananassa HOM05D000260 ORTHO05D000318 8.8e-07 58.5 231 26.8
Psat3g097520 Pisum sativum HOM05D000072 ORTHO05D000026 8.8e-07 58.5 251 23.5
PGR119G1741 Punica granatum HOM05D000260 ORTHO05D000318 8.8e-07 58.5 261 23.0
Sopen02g030890 Solanum pennellii HOM05D000072 ORTHO05D000026 8.8e-07 58.5 241 25.7
Gohir.D10G120500 Gossypium hirsutum HOM05D000072 ORTHO05D000026 1.2e-06 58.2 198 26.8
HPP92_006404 Vanilla planifolia HOM05D000260 ORTHO05D000318 1.2e-06 58.2 229 25.3
arahy.Tifrunner.gnm1.ann1.GW3QL7 Arachis hypogaea HOM05D000072 ORTHO05D000026 1.5e-06 57.8 262 24.0
Sopen02g030960 Solanum pennellii HOM05D000260 ORTHO05D000318 1.5e-06 57.8 234 25.2
TAR622G1060 Trochodendron aralioides HOM05D000072 ORTHO05D001031 1.5e-06 57.8 220 24.1
MBI09_g25171_MAGBIO Magnolia biondii HOM05D000260 ORTHO05D000318 2.0e-06 57.4 66 47.0
Sabra10G0091000 Salix brachista HOM05D000260 ORTHO05D004405 2.0e-06 57.4 224 24.6
Sabra10G0091300 Salix brachista HOM05D000260 ORTHO05D000318 2.0e-06 57.4 235 23.8
MSTRG.23593 Avicennia marina HOM05D000260 ORTHO05D000318 2.6e-06 57.0 233 25.8
Actinidia36339 Actinidia chinensis HOM05D000260 ORTHO05D000318 3.3e-06 56.6 249 26.5
GSVIVG01011854001 Vitis vinifera HOM05D000072 ORTHO05D000026 3.3e-06 56.6 246 24.0
Os01g0137700 Oryza sativa ssp. japonica HOM05D026682 ORTHO05D020946 4.4e-06 56.2 234 23.5
Psat3g098040 Pisum sativum HOM05D000260 ORTHO05D000318 5.7e-06 55.8 218 22.5
Solyc02g086210.4 Solanum lycopersicum HOM05D000072 ORTHO05D000318 5.7e-06 55.8 253 24.9


User provided reference genes

Program Settings