Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1125G006 Amborella trichopoda HOM05D004537 ORTHO05D005492 7.8e-177 623.6 301 100.0
Lalb_Chr11g0071071 Lupinus albus HOM05D004537 ORTHO05D005492 3.5e-12 76.6 78 55.1
Actinidia34915 Actinidia chinensis HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
Ah.00g237940 Amaranthus hybridus HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
ATMG01360 Arabidopsis thaliana HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
arahy.Tifrunner.gnm1.ann1.FSQ0ED Arachis hypogaea HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
arahy.Tifrunner.gnm1.ann1.JYE7Y9 Arachis hypogaea HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
arahy.Tifrunner.gnm1.ann1.QL9R2N Arachis hypogaea HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
A04p09350 Brassica napus HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
BolSC28t60311H Brassica oleracea HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
BolSC28t60367H Brassica oleracea HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
BraSC159t45726Z Brassica rapa HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
BraSC48t46236Z Brassica rapa HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
CANSAT16G0002 Cannabis sativa HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
CARHR283530 Cardamine hirsuta HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
Cpa.g.sc263.4 Carica papaya HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
CDE02G4726 Ceratophyllum demersum HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
Ca_07436_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
Ca_30901_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
COL.COLO4_04173 Corchorus olitorius HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
DCAR_032457 Daucus carota HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
Dinv06725 Davidia involucrata HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
Gorai.001G162500 Gossypium raimondii HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
Gorai.013G213100 Gossypium raimondii HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
HanXRQChr10g0310851 Helianthus annuus HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
HanXRQChr14g0433461 Helianthus annuus HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
HanXRQMTg0579341 Helianthus annuus HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
Hma1.2p1_0136F.1_g062006 Hydrangea macrophylla HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
LjContig00315g0003687 Lotus japonicus HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
LjContig00315g0010412 Lotus japonicus HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
Nn1g10090 Nelumbo nucifera HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
RhsimMtG0000400 Rhododendron simsii HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
RcHm_v2.0_Chr6g0256731 Rosa chinensis HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
SabraMtG0005600 Salix brachista HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
SHI26645 Sapria himalayana HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
Sp3g25790 Schrenkiella parvula HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
Sed0020696 Sechium edule HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
Sc08g0004810 Simmondsia chinensis HOM05D004537 ORTHO05D005492 1.8e-11 74.3 33 97.0
unitig_87.g28001 Utricularia gibba HOM05D004537 ORTHO05D005492 1.8e-11 74.3 32 100.0
Medtr8g106255 Medicago truncatula HOM05D004537 ORTHO05D005492 3.9e-11 73.2 33 93.9
Glyma.03G094400 Glycine max HOM05D004537 ORTHO05D005492 5.1e-11 72.8 33 93.9
HanXRQChr04g0127221 Helianthus annuus HOM05D004537 ORTHO05D005492 5.1e-11 72.8 33 93.9
HanXRQChr04g0127251 Helianthus annuus HOM05D004537 ORTHO05D005492 5.1e-11 72.8 33 93.9
Nitab4.5_0001761g0020 Nicotiana tabacum HOM05D004537 ORTHO05D005492 5.1e-11 72.8 78 52.6
Aqoxy12s002 Aquilegia oxysepala HOM05D004537 ORTHO05D005492 1.5e-10 71.2 33 93.9
CAN.G1109.10 Capsicum annuum HOM05D004537 ORTHO05D005492 1.5e-10 71.2 33 93.9
CAN.G1167.11 Capsicum annuum HOM05D004537 ORTHO05D005492 1.5e-10 71.2 33 93.9
CAN.G78.1 Capsicum annuum HOM05D004537 ORTHO05D005492 1.5e-10 71.2 33 93.9
QL10p061777 Quercus lobata HOM05D004537 ORTHO05D005492 1.5e-10 71.2 33 93.9
SHI35293 Sapria himalayana HOM05D004537 ORTHO05D005492 1.5e-10 71.2 32 96.9
Solyc00g500186.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 1.5e-10 71.2 33 93.9
Solyc00g500250.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 1.5e-10 71.2 33 93.9
Solyc00g500349.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 1.5e-10 71.2 33 93.9
Sopen05g012670 Solanum pennellii HOM05D004537 ORTHO05D005492 1.5e-10 71.2 33 93.9
PGSC0003DMG400002971 Solanum tuberosum HOM05D004537 ORTHO05D005492 1.5e-10 71.2 33 93.9
Gohir.D04G096416 Gossypium hirsutum HOM05D004537 ORTHO05D005492 4.3e-10 69.7 33 90.9
Solyc02g021770.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 1.3e-09 68.2 33 90.9
QL04p031979 Quercus lobata HOM05D004537 ORTHO05D005492 1.6e-09 67.8 33 87.9
Nitab4.5_0001127g0230 Nicotiana tabacum HOM05D004537 ORTHO05D005492 2.8e-09 67.0 33 87.9
Nitab4.5_0000019g0180 Nicotiana tabacum HOM05D004537 ORTHO05D005492 2.4e-08 63.9 33 84.8
Solyc07g019510.4 Solanum lycopersicum HOM05D004537 ORTHO05D005492 3.1e-08 63.5 33 81.8
Solyc11g063610.3 Solanum lycopersicum HOM05D004537 ORTHO05D005492 4.0e-08 63.2 33 84.8
ClCG04G003500 Citrullus lanatus HOM05D004537 ORTHO05D005492 4.5e-07 59.7 31 83.9
SEGI_28485 Sequoiadendron giganteum HOM05D004537 ORTHO05D005492 4.5e-07 59.7 33 81.8


User provided reference genes

Program Settings