Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1120G161 Amborella trichopoda HOM05D004218 ORTHO05D004938 2.8e-208 728.4 374 100.0
Nn3g17132 Nelumbo nucifera HOM05D004218 ORTHO05D004938 7.2e-132 474.6 381 68.0
TAR374G0431 Trochodendron aralioides HOM05D004218 ORTHO05D004938 7.2e-132 474.6 374 66.8
GSVIVG01020072001 Vitis vinifera HOM05D004218 ORTHO05D004938 4.7e-131 471.9 385 64.7
COL.COLO4_07925 Corchorus olitorius HOM05D004218 ORTHO05D004938 1.0e-130 470.7 336 70.5
Aqoxy3G03270 Aquilegia oxysepala HOM05D004218 ORTHO05D004938 1.4e-130 470.3 381 65.6
Lj6A794T99 Lonicera japonica HOM05D004218 ORTHO05D004938 3.0e-130 469.2 381 65.1
CAN.G279.12 Capsicum annuum HOM05D004218 ORTHO05D004938 5.2e-130 468.4 372 65.6
Cfa009032 Carpinus fangiana HOM05D004218 ORTHO05D004938 2.0e-129 466.5 368 68.8
FAN22G1204 Fragaria x ananassa HOM05D004218 ORTHO05D004938 5.7e-129 464.9 353 68.8
Dinv34202 Davidia involucrata HOM05D004218 ORTHO05D004938 1.3e-128 463.8 304 74.3
CANSAT64G2557 Cannabis sativa HOM05D004218 ORTHO05D004938 4.9e-128 461.8 322 70.8
Hma1.2p1_1545F.1_g289920 Hydrangea macrophylla HOM05D004218 ORTHO05D004938 4.9e-128 461.8 385 63.4
Sopen05g003030 Solanum pennellii HOM05D004218 ORTHO05D004938 4.9e-128 461.8 306 73.9
Manes.05G096800 Manihot esculenta HOM05D004218 ORTHO05D004938 6.3e-128 461.5 377 63.7
MD16G1078500 Malus domestica HOM05D004218 ORTHO05D004938 2.4e-127 459.5 387 63.3
QL03p065637 Quercus lobata HOM05D004218 ORTHO05D004938 2.4e-127 459.5 350 68.6
Thecc.02G354900 Theobroma cacao HOM05D004218 ORTHO05D004938 2.4e-127 459.5 322 70.5
PGSC0003DMG400017643 Solanum tuberosum HOM05D004218 ORTHO05D004938 3.1e-127 459.1 306 73.9
Cc11_g13440 Coffea canephora HOM05D004218 ORTHO05D004938 5.4e-127 458.4 324 71.0
Prupe.1G268000 Prunus persica HOM05D004218 ORTHO05D004938 5.4e-127 458.4 332 69.6
FAN17G0090 Fragaria x ananassa HOM05D004218 ORTHO05D004938 7.0e-127 458.0 322 71.1
Eucgr.G02550 Eucalyptus grandis HOM05D004218 ORTHO05D004938 1.6e-126 456.8 306 73.9
Actinidia31179 Actinidia chinensis HOM05D004218 ORTHO05D004938 2.7e-126 456.1 371 66.3
Solyc05g007060.4 Solanum lycopersicum HOM05D004218 ORTHO05D004938 5.9e-126 454.9 306 73.2
RcHm_v2.0_Chr4g0440591 Rosa chinensis HOM05D004218 ORTHO05D004938 7.8e-126 454.5 358 66.5
vmacro01228 Vaccinium macrocarpon HOM05D004218 ORTHO05D004938 1.0e-125 454.1 396 61.6
Duzib248G0205 Durio zibethinus HOM05D004218 ORTHO05D004938 1.7e-125 453.4 301 73.1
Rhsim12G0057400 Rhododendron simsii HOM05D004218 ORTHO05D004938 1.7e-125 453.4 339 68.7
Lalb_Chr17g0340391 Lupinus albus HOM05D004218 ORTHO05D004938 2.3e-125 453.0 328 68.0
Peaxi162Scf00209g00319 Petunia axillaris HOM05D004218 ORTHO05D004938 5.0e-125 451.8 301 72.8
Hund25269 Selenicereus undatus HOM05D004218 ORTHO05D004938 8.6e-125 451.1 316 71.2
Ciclev10031724m.g Citrus clementina HOM05D004218 ORTHO05D004938 1.1e-124 450.7 352 65.6
Gohir.D13G068200 Gossypium hirsutum HOM05D004218 ORTHO05D004938 1.9e-124 449.9 372 62.6
CSS0011407 Camellia sinensis var. sinensis HOM05D004218 ORTHO05D004938 2.5e-124 449.5 372 63.2
FAN12G1121 Fragaria x ananassa HOM05D004218 ORTHO05D004938 4.3e-124 448.7 360 66.1
PGR119G2468 Punica granatum HOM05D004218 ORTHO05D004938 7.3e-124 448.0 382 62.3
Gorai.013G077700 Gossypium raimondii HOM05D004218 ORTHO05D004938 9.5e-124 447.6 372 62.4
Glyma.02G021600 Glycine max HOM05D004218 ORTHO05D004938 1.2e-123 447.2 372 62.1
Phvul.002G066300 Phaseolus vulgaris HOM05D004218 ORTHO05D004938 1.6e-123 446.8 319 69.0
Medtr5g038460 Medicago truncatula HOM05D004218 ORTHO05D004938 2.1e-123 446.4 367 63.2
AUR62026251 Chenopodium quinoa HOM05D004218 ORTHO05D004938 2.8e-123 446.0 301 73.1
MSTRG.7824 Avicennia marina HOM05D004218 ORTHO05D004938 8.0e-123 444.5 381 63.0
SGA_v2.0_scaffold302G47864 Striga asiatica HOM05D004218 ORTHO05D004938 1.0e-122 444.1 301 71.4
CiPaw.05G139700 Carya illinoinensis HOM05D004218 ORTHO05D004938 1.4e-122 443.7 290 74.1
Migut.L01342 Erythranthe guttata HOM05D004218 ORTHO05D004938 1.4e-122 443.7 369 62.1
Sc14g0008380 Simmondsia chinensis HOM05D004218 ORTHO05D004938 1.8e-122 443.4 372 64.5
VMungo1215G2729 Vigna mungo HOM05D004218 ORTHO05D004938 6.8e-122 441.4 320 67.5
Cpa.g.sc5.274 Carica papaya HOM05D004218 ORTHO05D004938 8.9e-122 441.0 368 64.9
Lj2g0000105 Lotus japonicus HOM05D004218 ORTHO05D004938 2.0e-121 439.9 376 60.4
PSO478G0406 Papaver somniferum HOM05D004218 ORTHO05D004938 9.8e-121 437.6 365 63.6
Ca_04743_v3 Cicer arietinum L. HOM05D004218 ORTHO05D004938 1.7e-120 436.8 304 71.1
TWI18G0549 Tripterygium wilfordii HOM05D004218 ORTHO05D004938 1.7e-120 436.8 370 62.4
Ah.01g005530 Amaranthus hybridus HOM05D004218 ORTHO05D004938 1.1e-119 434.1 301 71.1
Sed0012992 Sechium edule HOM05D004218 ORTHO05D004938 1.1e-119 434.1 368 63.6
DCAR_027386 Daucus carota HOM05D004218 ORTHO05D004938 1.4e-119 433.7 299 70.6
PSO017G6443 Papaver somniferum HOM05D004218 ORTHO05D004938 1.4e-119 433.7 372 61.8
Os10g0463800 Oryza sativa ssp. japonica HOM05D004218 ORTHO05D004938 1.9e-119 433.3 301 71.8
Psat0s3244g0040 Pisum sativum HOM05D004218 ORTHO05D004938 2.4e-119 433.0 367 61.0
THA.LOC104822930 Tarenaya hassleriana HOM05D004218 ORTHO05D004938 2.4e-119 433.0 368 60.9
TPR.G13761 Trifolium pratense HOM05D004218 ORTHO05D004938 3.2e-119 432.6 330 66.1
Aa31LG7G8130 Aethionema arabicum HOM05D004218 ORTHO05D004938 2.7e-118 429.5 373 60.3
CsaV3_6G036150 Cucumis sativus L. HOM05D004218 ORTHO05D004938 2.7e-118 429.5 369 61.2
arahy.Tifrunner.gnm1.ann1.08CHDU Arachis hypogaea HOM05D004218 ORTHO05D004938 3.5e-118 429.1 369 62.3
CDE06G2220 Ceratophyllum demersum HOM05D004218 ORTHO05D004938 4.6e-118 428.7 370 63.2
BolC5t29284H Brassica oleracea HOM05D004218 ORTHO05D004938 7.8e-118 427.9 373 60.1
Carub.0001s0633 Capsella rubella HOM05D004218 ORTHO05D004938 7.8e-118 427.9 370 61.1
Gohir.A13G052700 Gossypium hirsutum HOM05D004218 ORTHO05D004938 7.8e-118 427.9 388 58.5
arahy.Tifrunner.gnm1.ann1.VAP5EU Arachis hypogaea HOM05D004218 ORTHO05D004938 1.0e-117 427.6 361 62.3
CARHR006730 Cardamine hirsuta HOM05D004218 ORTHO05D004938 2.3e-117 426.4 368 60.6
Potri.008G194800 Populus trichocarpa HOM05D004218 ORTHO05D004938 3.9e-117 425.6 380 60.8
Zm00001eb046510 Zea mays HOM05D004218 ORTHO05D004938 5.0e-117 425.2 361 62.6
AL1G17150 Arabidopsis lyrata HOM05D004218 ORTHO05D004938 1.5e-116 423.7 371 60.1
BraA10t42819Z Brassica rapa HOM05D004218 ORTHO05D004938 1.5e-116 423.7 376 59.3
A10p05580 Brassica napus HOM05D004218 ORTHO05D004938 3.3e-116 422.5 374 59.4
MELO3C026498.2 Cucumis melo HOM05D004218 ORTHO05D004938 4.3e-116 422.2 329 65.7
AT1G07040 Arabidopsis thaliana HOM05D004218 ORTHO05D004938 5.6e-116 421.8 375 59.5
Lsat_1_v5_gn_8_54121 Lactuca sativa HOM05D004218 ORTHO05D004938 5.6e-116 421.8 309 67.3
HanXRQChr08g0209171 Helianthus annuus HOM05D004218 ORTHO05D004938 7.3e-116 421.4 349 61.3
EL10Ac6g13149 Beta vulgaris HOM05D004218 ORTHO05D004938 1.2e-115 420.6 360 63.1
Thhalv10007958m.g Eutrema salsugineum HOM05D004218 ORTHO05D004938 1.6e-115 420.2 375 59.5
Sabra08G0148000 Salix brachista HOM05D004218 ORTHO05D004938 1.6e-115 420.2 380 61.1
unitig_749.g13251 Utricularia gibba HOM05D004218 ORTHO05D004938 1.6e-115 420.2 366 62.6
Dinv24956 Davidia involucrata HOM05D004218 ORTHO05D004938 6.8e-114 414.8 328 65.5
SEGI_07096 Sequoiadendron giganteum HOM05D004218 ORTHO05D004938 1.2e-113 414.1 373 59.2
Sp1g05760 Schrenkiella parvula HOM05D004218 ORTHO05D004938 2.0e-113 413.3 373 59.0
ECA236G4940 Erigeron canadensis HOM05D004218 ORTHO05D004938 3.4e-113 412.5 309 67.0
HPP92_000630 Vanilla planifolia HOM05D004218 ORTHO05D004938 4.9e-112 408.7 372 58.9
Nitab4.5_0009649g0010 Nicotiana tabacum HOM05D004218 ORTHO05D004938 6.0e-110 401.7 373 58.7
ClCG08G009010 Citrullus lanatus HOM05D004218 ORTHO05D004938 1.5e-108 397.1 439 52.6
FAN07G0325 Fragaria x ananassa HOM05D004218 ORTHO05D004938 9.5e-108 394.4 252 76.6
Nitab4.5_0009146g0020 Nicotiana tabacum HOM05D004218 ORTHO05D004938 1.4e-103 380.6 371 57.1
C05p05130 Brassica napus HOM05D004218 ORTHO05D004938 4.1e-103 379.0 341 58.4
SalBow2G1790 Salvia bowleyana HOM05D004218 ORTHO05D004938 4.6e-102 375.6 274 66.4
SalBow2G2061 Salvia bowleyana HOM05D004218 ORTHO05D004938 4.6e-102 375.6 274 66.4
Mapoly0004s0239 Marchantia polymorpha HOM05D004218 ORTHO05D004938 6.4e-96 355.1 309 58.9
SMO118G0107 Selaginella moellendorffii HOM05D004218 ORTHO05D004938 1.7e-93 347.1 295 60.0
AagrBONN_evm.TU.Sc2ySwM_362.1084 Anthoceros agrestis HOM05D004218 ORTHO05D004938 3.0e-93 346.3 280 60.4
Pp3c14_9960 Physcomitrium patens HOM05D004218 ORTHO05D004938 1.1e-92 344.4 303 58.4
FvH4_4g31940 Fragaria vesca HOM05D004218 ORTHO05D004938 1.9e-87 327.0 268 64.2
Atru.chr11.1849 Acer truncatum HOM05D004218 ORTHO05D004938 4.2e-87 325.9 275 61.1
Thhalv10008275m.g Eutrema salsugineum HOM05D004218 ORTHO05D004938 6.6e-85 318.5 293 51.9
BraA07t29096Z Brassica rapa HOM05D004218 ORTHO05D004938 1.1e-84 317.8 291 53.3
BcaB06g28798 Brassica carinata HOM05D004218 ORTHO05D004938 1.3e-83 314.3 292 51.4
BcaB03g14100 Brassica carinata HOM05D004218 ORTHO05D004938 2.8e-83 313.2 291 52.9
A07p13260 Brassica napus HOM05D004218 ORTHO05D004938 3.6e-83 312.8 291 52.6
AT1G27020 Arabidopsis thaliana HOM05D004218 ORTHO05D004938 4.8e-83 312.4 292 54.8
BolC4t27868H Brassica oleracea HOM05D004218 ORTHO05D004938 8.1e-83 311.6 292 51.0
AL1G38480 Arabidopsis lyrata HOM05D004218 ORTHO05D004938 1.4e-82 310.8 299 51.8
CARHR024900 Cardamine hirsuta HOM05D004218 ORTHO05D004938 1.4e-82 310.8 292 54.5
AUR62026441 Chenopodium quinoa HOM05D004218 ORTHO05D004938 1.4e-82 310.8 297 58.6
BcaB03g11982 Brassica carinata HOM05D004218 ORTHO05D004938 5.3e-82 308.9 302 50.0
THA.LOC104822097 Tarenaya hassleriana HOM05D004218 ORTHO05D004938 5.3e-82 308.9 300 51.3
AL1G38500 Arabidopsis lyrata HOM05D004218 ORTHO05D004938 6.9e-82 308.5 292 53.1
Carub.0001s2395 Capsella rubella HOM05D004218 ORTHO05D004938 1.5e-81 307.4 310 51.6
Thhalv10007811m.g Eutrema salsugineum HOM05D004218 ORTHO05D004938 1.5e-81 307.4 289 51.2
Sp1g21770 Schrenkiella parvula HOM05D004218 ORTHO05D004938 4.5e-81 305.8 297 50.5
AT1G27030 Arabidopsis thaliana HOM05D004218 ORTHO05D004938 5.8e-81 305.4 299 50.5
AL1G38490 Arabidopsis lyrata HOM05D004218 ORTHO05D004938 7.6e-81 305.1 299 49.8
A07p13210 Brassica napus HOM05D004218 ORTHO05D004938 9.9e-81 304.7 292 50.7
Psat0s917g0040 Pisum sativum HOM05D004218 ORTHO05D004938 1.3e-80 304.3 218 65.6
Thhalv10008276m.g Eutrema salsugineum HOM05D004218 ORTHO05D004938 2.2e-80 303.5 290 51.0
BcaC06g35101 Brassica carinata HOM05D004218 ORTHO05D004938 2.9e-80 303.1 292 50.3
Thhalv10023603m.g Eutrema salsugineum HOM05D004218 ORTHO05D004938 1.1e-79 301.2 291 50.9
BraA07t29093Z Brassica rapa HOM05D004218 ORTHO05D004938 1.4e-79 300.8 292 50.0
CARHR024890 Cardamine hirsuta HOM05D004218 ORTHO05D004938 2.4e-79 300.1 298 50.0
Thhalv10000255m.g Eutrema salsugineum HOM05D004218 ORTHO05D004938 4.2e-79 299.3 292 50.7
A07p13220 Brassica napus HOM05D004218 ORTHO05D004938 5.4e-79 298.9 292 50.7
C07p19810 Brassica napus HOM05D004218 ORTHO05D004938 1.2e-78 297.7 292 50.3
BolC7t42494H Brassica oleracea HOM05D004218 ORTHO05D004938 1.2e-78 297.7 292 50.3
BraA09t39542Z Brassica rapa HOM05D004218 ORTHO05D004938 1.6e-78 297.4 293 51.9
A09p40450 Brassica napus HOM05D004218 ORTHO05D004938 2.7e-78 296.6 293 51.5
BraA08t34706Z Brassica rapa HOM05D004218 ORTHO05D004938 2.7e-78 296.6 293 50.9
Sp1g21785 Schrenkiella parvula HOM05D004218 ORTHO05D004938 4.6e-78 295.8 304 49.7
Sp1g21780 Schrenkiella parvula HOM05D004218 ORTHO05D004938 1.0e-77 294.7 292 49.0
BcaB03g14099 Brassica carinata HOM05D004218 ORTHO05D004938 1.8e-77 293.9 297 48.5
A08p27710 Brassica napus HOM05D004218 ORTHO05D004938 1.9e-76 290.4 293 49.8
BcaC06g35098 Brassica carinata HOM05D004218 ORTHO05D004938 4.3e-76 289.3 273 52.4
Carub.0001s2394 Capsella rubella HOM05D004218 ORTHO05D004938 3.7e-75 286.2 294 47.3
BcaC07g39255 Brassica carinata HOM05D004218 ORTHO05D004938 1.4e-74 284.3 279 50.9
BraA07t29094Z Brassica rapa HOM05D004218 ORTHO05D004938 2.4e-74 283.5 299 47.8
AL1G38470 Arabidopsis lyrata HOM05D004218 ORTHO05D004938 2.3e-69 266.9 271 47.2
BcaC05g26350 Brassica carinata HOM05D004218 ORTHO05D004938 1.5e-68 264.2 293 49.1
BolC5t31091H Brassica oleracea HOM05D004218 ORTHO05D004938 9.6e-68 261.5 279 49.5
C08p22580 Brassica napus HOM05D004218 ORTHO05D004938 3.1e-66 256.5 351 40.5
C05p23720 Brassica napus HOM05D004218 ORTHO05D004938 7.6e-65 251.9 272 48.5
Haze_12061 Corylus avellana HOM05D004218 ORTHO05D004938 2.7e-62 243.4 242 59.1
BcaC06g35100 Brassica carinata HOM05D004218 ORTHO05D004938 4.6e-62 242.7 252 48.4
Glyma.01G042500 Glycine max HOM05D004218 ORTHO05D004938 2.3e-61 240.4 292 46.2
AL8G21080 Arabidopsis lyrata HOM05D004218 ORTHO05D004938 5.5e-55 219.2 220 50.9
PRCOL_00000833 Prasinoderma coloniale HOM05D004218 ORTHO05D004938 3.0e-53 213.4 256 46.1
Cre07.g342800 Chlamydomonas reinhardtii HOM05D004218 ORTHO05D004938 2.8e-51 206.8 290 41.0
C07p19800 Brassica napus HOM05D004218 ORTHO05D004938 5.9e-49 199.1 194 51.0
BolC7t42493H Brassica oleracea HOM05D004218 ORTHO05D004938 5.9e-49 199.1 194 51.0
BcaC05g24668 Brassica carinata HOM05D004218 ORTHO05D002942 2.2e-48 197.2 249 47.8
Lj6A794G97 Lonicera japonica HOM05D004218 ORTHO05D004938 4.7e-46 189.5 235 48.5
BolC7t42500H Brassica oleracea HOM05D004218 ORTHO05D004938 1.4e-37 161.4 128 57.8
C07p19850 Brassica napus HOM05D004218 ORTHO05D004938 9.7e-36 155.2 128 56.2
BolC7t42503H Brassica oleracea HOM05D004218 ORTHO05D004938 9.7e-36 155.2 128 56.2
BolC8t49896H Brassica oleracea HOM05D004218 ORTHO05D004938 1.1e-34 151.8 149 51.0
AUR62026443 Chenopodium quinoa HOM05D004218 ORTHO05D004938 2.2e-32 144.1 85 82.4
AL8G21090 Arabidopsis lyrata HOM05D004218 ORTHO05D004938 8.5e-32 142.1 302 31.8
C07p19840 Brassica napus HOM05D004218 ORTHO05D004938 1.5e-28 131.3 111 53.2
CAN.G683.6 Capsicum annuum HOM05D004218 ORTHO05D004938 8.5e-24 115.5 97 61.9
C07p19830 Brassica napus HOM05D004218 ORTHO05D004938 1.2e-22 111.7 149 43.0
MCO10G201 Micromonas commoda HOM05D004218 ORTHO05D004938 1.2e-17 95.1 300 27.3
BcaB06g26783 Brassica carinata HOM05D005295 ORTHO05D005962 3.6e-14 83.6 57 71.9


User provided reference genes

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