Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1120G094 Amborella trichopoda HOM05D003952 ORTHO05D005083 0.0e+00 2252.2 1144 100.0
MBI04_g08946_MAGBIO Magnolia biondii HOM05D003952 ORTHO05D005083 0.0e+00 1756.9 1148 78.5
TAR628G1191 Trochodendron aralioides HOM05D003952 ORTHO05D005083 0.0e+00 1724.5 1147 77.3
Nn008s41421 Nelumbo nucifera HOM05D003952 ORTHO05D005083 0.0e+00 1672.9 1151 75.4
Haze_17805 Corylus avellana HOM05D003952 ORTHO05D005083 0.0e+00 1665.6 1147 75.2
Cfa018280 Carpinus fangiana HOM05D003952 ORTHO05D005083 0.0e+00 1663.7 1147 75.1
QL02p038017 Quercus lobata HOM05D003952 ORTHO05D005083 0.0e+00 1657.5 1143 75.0
QL02p037499 Quercus lobata HOM05D003952 ORTHO05D005083 0.0e+00 1656.7 1143 74.9
Thecc.08G159400 Theobroma cacao HOM05D003952 ORTHO05D005083 0.0e+00 1653.6 1148 74.6
Duzib093G1052 Durio zibethinus HOM05D003952 ORTHO05D005083 0.0e+00 1647.9 1148 74.7
Nn5g28824 Nelumbo nucifera HOM05D003952 ORTHO05D005083 0.0e+00 1639.0 1152 74.1
CiPaw.15G012400 Carya illinoinensis HOM05D003952 ORTHO05D005083 0.0e+00 1635.5 1145 74.1
Gohir.A05G246500 Gossypium hirsutum HOM05D003952 ORTHO05D005083 0.0e+00 1634.4 1147 74.5
Atru.chr13.2009 Acer truncatum HOM05D003952 ORTHO05D005083 0.0e+00 1632.8 1145 73.5
Gohir.D05G248000 Gossypium hirsutum HOM05D003952 ORTHO05D005083 0.0e+00 1632.5 1148 74.7
Gorai.009G258800 Gossypium raimondii HOM05D003952 ORTHO05D005083 0.0e+00 1630.9 1148 74.6
Potri.005G196700 Populus trichocarpa HOM05D003952 ORTHO05D005083 0.0e+00 1627.8 1147 73.8
Prupe.8G040600 Prunus persica HOM05D003952 ORTHO05D005083 0.0e+00 1625.9 1147 73.5
Potri.002G064400 Populus trichocarpa HOM05D003952 ORTHO05D005083 0.0e+00 1624.0 1149 74.1
MD10G1034200 Malus domestica HOM05D003952 ORTHO05D005083 0.0e+00 1620.1 1147 73.1
CSS0032669 Camellia sinensis var. sinensis HOM05D003952 ORTHO05D005083 0.0e+00 1618.2 1148 73.7
CSS0017406 Camellia sinensis var. sinensis HOM05D003952 ORTHO05D005083 0.0e+00 1617.4 1146 74.1
Duzib116G0427 Durio zibethinus HOM05D003952 ORTHO05D005083 0.0e+00 1615.5 1148 73.7
RcHm_v2.0_Chr6g0274251 Rosa chinensis HOM05D003952 ORTHO05D005083 0.0e+00 1612.8 1157 72.5
Sabra05G0149800 Salix brachista HOM05D003952 ORTHO05D005083 0.0e+00 1610.5 1150 72.8
Eucgr.F02686 Eucalyptus grandis HOM05D003952 ORTHO05D005083 0.0e+00 1608.6 1149 73.1
FvH4_2g13030 Fragaria vesca HOM05D003952 ORTHO05D005083 0.0e+00 1607.8 1157 72.8
TWI60G0338 Tripterygium wilfordii HOM05D003952 ORTHO05D005083 0.0e+00 1605.5 1147 71.9
MD05G1033400 Malus domestica HOM05D003952 ORTHO05D005083 0.0e+00 1605.1 1147 72.7
arahy.Tifrunner.gnm1.ann1.5NL3D9 Arachis hypogaea HOM05D003952 ORTHO05D005083 0.0e+00 1603.2 1160 71.7
Cc10_g15270 Coffea canephora HOM05D003952 ORTHO05D005083 0.0e+00 1599.7 1149 72.8
Glyma.10G221500 Glycine max HOM05D003952 ORTHO05D005083 0.0e+00 1598.9 1149 72.0
Aqoxy6G00415 Aquilegia oxysepala HOM05D003952 ORTHO05D005083 0.0e+00 1596.3 1149 72.4
arahy.Tifrunner.gnm1.ann1.2T81X8 Arachis hypogaea HOM05D003952 ORTHO05D005083 0.0e+00 1596.3 1160 71.5
Phvul.007G083500 Phaseolus vulgaris HOM05D003952 ORTHO05D005083 0.0e+00 1593.9 1168 71.2
Lalb_Chr06g0161721 Lupinus albus HOM05D003952 ORTHO05D005083 0.0e+00 1593.6 1145 71.8
PSO170G5657 Papaver somniferum HOM05D003952 ORTHO05D005083 0.0e+00 1592.8 1150 71.6
TWI32G0799 Tripterygium wilfordii HOM05D003952 ORTHO05D005083 0.0e+00 1590.5 1150 71.7
TWI34G1640 Tripterygium wilfordii HOM05D003952 ORTHO05D005083 0.0e+00 1589.3 1148 72.2
Lalb_Chr02g0141571 Lupinus albus HOM05D003952 ORTHO05D005083 0.0e+00 1588.9 1146 71.6
FAN15G1441 Fragaria x ananassa HOM05D003952 ORTHO05D005083 0.0e+00 1585.5 1191 70.5
FAN24G3461 Fragaria x ananassa HOM05D003952 ORTHO05D005083 0.0e+00 1585.5 1195 70.4
FAN27G2428 Fragaria x ananassa HOM05D003952 ORTHO05D005083 0.0e+00 1583.2 1195 70.1
Sc20g0003770 Simmondsia chinensis HOM05D003952 ORTHO05D005083 0.0e+00 1583.2 1147 71.4
FAN20G1325 Fragaria x ananassa HOM05D003952 ORTHO05D005083 0.0e+00 1582.8 1195 70.4
Gohir.A02G062600 Gossypium hirsutum HOM05D003952 ORTHO05D005083 0.0e+00 1578.5 1148 72.4
Zm00001eb337600 Zea mays HOM05D003952 ORTHO05D005083 0.0e+00 1578.1 1150 72.1
PGR042G0685 Punica granatum HOM05D003952 ORTHO05D005083 0.0e+00 1577.8 1153 71.6
VMungo0720G2354 Vigna mungo HOM05D003952 ORTHO05D005083 0.0e+00 1576.2 1168 70.5
Medtr1g098160 Medicago truncatula HOM05D003952 ORTHO05D005083 0.0e+00 1575.8 1148 70.9
Gorai.005G077100 Gossypium raimondii HOM05D003952 ORTHO05D005083 0.0e+00 1575.5 1148 72.3
CANSAT25G0323 Cannabis sativa HOM05D003952 ORTHO05D005083 0.0e+00 1575.1 1149 72.1
Gohir.D02G068200 Gossypium hirsutum HOM05D003952 ORTHO05D005083 0.0e+00 1574.7 1148 72.3
SalBow7G2315 Salvia bowleyana HOM05D003952 ORTHO05D005083 0.0e+00 1573.9 1150 71.8
Rhsim11G0087700 Rhododendron simsii HOM05D003952 ORTHO05D005083 0.0e+00 1573.1 1185 71.0
Lj5g0005273 Lotus japonicus HOM05D003952 ORTHO05D005083 0.0e+00 1572.0 1147 71.2
Os01g0182600 Oryza sativa ssp. japonica HOM05D003952 ORTHO05D005083 0.0e+00 1568.9 1152 71.8
arahy.Tifrunner.gnm1.ann1.SZWP5S Arachis hypogaea HOM05D003952 ORTHO05D005083 0.0e+00 1568.5 1149 70.8
Peaxi162Scf00360g00418 Petunia axillaris HOM05D003952 ORTHO05D005083 0.0e+00 1567.4 1155 71.0
DCAR_001164 Daucus carota HOM05D003952 ORTHO05D005083 0.0e+00 1565.4 1146 71.3
Glyma.20G170000 Glycine max HOM05D003952 ORTHO05D005083 0.0e+00 1562.7 1148 70.6
Zm00001eb122110 Zea mays HOM05D003952 ORTHO05D005083 0.0e+00 1562.4 1158 71.3
vmacro01493 Vaccinium macrocarpon HOM05D003952 ORTHO05D005083 0.0e+00 1560.8 1184 70.4
Sopen04g027970 Solanum pennellii HOM05D003952 ORTHO05D005083 0.0e+00 1559.3 1149 71.5
Solyc04g071990.3 Solanum lycopersicum HOM05D003952 ORTHO05D005083 0.0e+00 1558.9 1149 71.5
MSTRG.24931 Avicennia marina HOM05D003952 ORTHO05D005083 0.0e+00 1558.1 1148 71.2
Sed0012183 Sechium edule HOM05D003952 ORTHO05D005083 0.0e+00 1557.0 1145 70.3
Sabra02G0051500 Salix brachista HOM05D003952 ORTHO05D005083 0.0e+00 1555.8 1207 69.0
Sopen12g029310 Solanum pennellii HOM05D003952 ORTHO05D005083 0.0e+00 1553.1 1150 70.3
HPP92_008686 Vanilla planifolia HOM05D003952 ORTHO05D005083 0.0e+00 1553.1 1143 70.6
arahy.Tifrunner.gnm1.ann1.AF3FG0 Arachis hypogaea HOM05D003952 ORTHO05D005083 0.0e+00 1552.7 1181 69.0
Nitab4.5_0000872g0040 Nicotiana tabacum HOM05D003952 ORTHO05D005083 0.0e+00 1551.6 1145 70.7
HPP92_008674 Vanilla planifolia HOM05D003952 ORTHO05D005083 0.0e+00 1551.6 1145 70.2
Solyc12g056650.2 Solanum lycopersicum HOM05D003952 ORTHO05D005083 0.0e+00 1550.8 1150 70.2
MSTRG.22108 Avicennia marina HOM05D003952 ORTHO05D005083 0.0e+00 1549.3 1149 70.7
CAN.G495.15 Capsicum annuum HOM05D003952 ORTHO05D005083 0.0e+00 1549.3 1135 71.2
Ciclev10004044m.g Citrus clementina HOM05D003952 ORTHO05D005083 0.0e+00 1547.7 1103 73.2
CsaV3_7G024490 Cucumis sativus L. HOM05D003952 ORTHO05D005083 0.0e+00 1546.2 1147 69.9
MELO3C024067.2 Cucumis melo HOM05D003952 ORTHO05D005083 0.0e+00 1545.8 1147 70.2
Oeu051283.1 Olea europaea HOM05D003952 ORTHO05D005083 0.0e+00 1544.6 1146 70.3
AUR62034894 Chenopodium quinoa HOM05D003952 ORTHO05D005083 0.0e+00 1540.8 1154 70.2
Nitab4.5_0000099g0200 Nicotiana tabacum HOM05D003952 ORTHO05D005083 0.0e+00 1539.2 1180 69.9
Oeu002069.1 Olea europaea HOM05D003952 ORTHO05D005083 0.0e+00 1538.1 1156 70.7
Nitab4.5_0004270g0010 Nicotiana tabacum HOM05D003952 ORTHO05D005083 0.0e+00 1535.8 1166 69.3
CsaV3_6G005020 Cucumis sativus L. HOM05D003952 ORTHO05D005083 0.0e+00 1533.5 1148 70.8
Ca_10663_v3 Cicer arietinum L. HOM05D003952 ORTHO05D005083 0.0e+00 1531.2 1204 67.4
CAN.G26.47 Capsicum annuum HOM05D003952 ORTHO05D005083 0.0e+00 1528.8 1152 69.4
Sed0019934 Sechium edule HOM05D003952 ORTHO05D005083 0.0e+00 1528.5 1148 69.9
Migut.N02951 Erythranthe guttata HOM05D003952 ORTHO05D005083 0.0e+00 1526.5 1153 70.1
Glyma.16G163200 Glycine max HOM05D003952 ORTHO05D005083 0.0e+00 1523.1 1146 70.5
THA.LOC104810466 Tarenaya hassleriana HOM05D003952 ORTHO05D005083 0.0e+00 1522.3 1152 69.7
MELO3C030034.2 Cucumis melo HOM05D003952 ORTHO05D005083 0.0e+00 1521.9 1148 70.3
SGA_v2.0_scaffold133G34641 Striga asiatica HOM05D003952 ORTHO05D005083 0.0e+00 1520.8 1145 70.1
EL10Ac1g01605 Beta vulgaris HOM05D003952 ORTHO05D005083 0.0e+00 1518.1 1207 67.4
Nitab4.5_0005673g0010 Nicotiana tabacum HOM05D003952 ORTHO05D005083 0.0e+00 1515.4 1108 71.7
Phvul.004G088300 Phaseolus vulgaris HOM05D003952 ORTHO05D005083 0.0e+00 1515.4 1149 69.0
ClCG08G007370 Citrullus lanatus HOM05D003952 ORTHO05D005083 0.0e+00 1515.0 1148 70.3
CARHR023130 Cardamine hirsuta HOM05D003952 ORTHO05D005083 0.0e+00 1511.1 1152 69.6
ClCG09G010210 Citrullus lanatus HOM05D003952 ORTHO05D005083 0.0e+00 1510.7 1157 68.8
Carub.0001s2228 Capsella rubella HOM05D003952 ORTHO05D005083 0.0e+00 1509.2 1152 69.9
Migut.C00380 Erythranthe guttata HOM05D003952 ORTHO05D005083 0.0e+00 1507.7 1153 69.5
Aa31LG7G6730 Aethionema arabicum HOM05D003952 ORTHO05D005083 0.0e+00 1506.9 1149 69.6
AL1G36320 Arabidopsis lyrata HOM05D003952 ORTHO05D005083 0.0e+00 1505.0 1151 69.3
AT1G22770 Arabidopsis thaliana HOM05D003952 ORTHO05D005083 0.0e+00 1503.4 1151 69.4
TPR.G17028 Trifolium pratense HOM05D003952 ORTHO05D005083 0.0e+00 1501.1 1146 68.6
Thhalv10006603m.g Eutrema salsugineum HOM05D003952 ORTHO05D005083 0.0e+00 1499.2 1152 69.6
HanXRQChr11g0320211 Helianthus annuus HOM05D003952 ORTHO05D005083 0.0e+00 1495.3 1150 70.2
Manes.18G095000 Manihot esculenta HOM05D003952 ORTHO05D005083 0.0e+00 1494.2 1075 72.7
Sp1g20280 Schrenkiella parvula HOM05D003952 ORTHO05D005083 0.0e+00 1492.2 1159 68.9
Peaxi162Scf00160g01744 Petunia axillaris HOM05D003952 ORTHO05D005083 0.0e+00 1491.9 1205 66.0
ECA246G0004 Erigeron canadensis HOM05D003952 ORTHO05D005083 0.0e+00 1491.1 1157 68.5
A09p41970 Brassica napus HOM05D003952 ORTHO05D005083 0.0e+00 1488.4 1152 69.0
C05p21880 Brassica napus HOM05D003952 ORTHO05D005083 0.0e+00 1483.8 1151 68.7
Psat6g190640 Pisum sativum HOM05D003952 ORTHO05D005083 0.0e+00 1473.4 1048 73.0
Lsat_1_v5_gn_6_101520 Lactuca sativa HOM05D003952 ORTHO05D005083 0.0e+00 1456.4 1148 68.0
Lsat_1_v5_gn_9_42181 Lactuca sativa HOM05D003952 ORTHO05D005083 0.0e+00 1455.3 1164 67.4
Lj7A383T43 Lonicera japonica HOM05D003952 ORTHO05D005083 0.0e+00 1454.1 1160 67.7
AUR62026637 Chenopodium quinoa HOM05D003952 ORTHO05D005083 0.0e+00 1438.7 1112 68.8
unitig_747.g21544 Utricularia gibba HOM05D003952 ORTHO05D005083 0.0e+00 1340.9 1150 63.3
Ah.05g168180 Amaranthus hybridus HOM05D003952 ORTHO05D005083 0.0e+00 1321.2 1076 65.8
Dinv25899 Davidia involucrata HOM05D003952 ORTHO05D005083 0.0e+00 1315.8 921 74.4
CiPaw.16G008300 Carya illinoinensis HOM05D003952 ORTHO05D005083 0.0e+00 1271.9 921 72.1
COL.COLO4_13783 Corchorus olitorius HOM05D003952 ORTHO05D005083 0.0e+00 1260.4 1037 66.5
Lalb_Chr01g0009771 Lupinus albus HOM05D003952 ORTHO05D005083 0.0e+00 1248.0 940 69.6
Sed0012813 Sechium edule HOM05D003952 ORTHO05D005083 0.0e+00 1207.6 925 70.8
PGSC0003DMG400018791 Solanum tuberosum HOM05D003952 ORTHO05D005083 0.0e+00 1181.0 889 69.4
Lj4C703T11 Lonicera japonica HOM05D003952 ORTHO05D005083 0.0e+00 1161.0 960 65.9
unitig_32.g11167 Utricularia gibba HOM05D003952 ORTHO05D005083 0.0e+00 1142.9 1149 56.7
TAR381G0458 Trochodendron aralioides HOM05D003952 ORTHO05D005083 0.0e+00 1125.2 813 72.2
CSS0023419 Camellia sinensis var. sinensis HOM05D003952 ORTHO05D005083 0.0e+00 1105.5 929 66.5
Actinidia29549 Actinidia chinensis HOM05D003952 ORTHO05D005083 0.0e+00 1079.7 944 63.6
BcaNung06971 Brassica carinata HOM05D003952 ORTHO05D005083 0.0e+00 1075.1 781 72.7
Oeu022058.1 Olea europaea HOM05D003952 ORTHO05D005083 4.7e-299 1031.6 813 67.2
SMO367G0140 Selaginella moellendorffii HOM05D003952 ORTHO05D005083 1.1e-295 1020.4 1146 50.1
SalBow6G3936 Salvia bowleyana HOM05D003952 ORTHO05D005083 1.4e-295 1020.0 1141 53.0
Mapoly0019s0145 Marchantia polymorpha HOM05D003952 ORTHO05D005083 1.5e-292 1010.0 1189 48.8
VMungo0464G1608 Vigna mungo HOM05D003952 ORTHO05D005083 4.6e-286 988.4 813 65.7
CDE04G2370 Ceratophyllum demersum HOM05D003952 ORTHO05D005083 1.6e-278 963.4 717 71.3
Hma1.2p1_0678F.1_g202015 Hydrangea macrophylla HOM05D003952 ORTHO05D005083 1.1e-274 950.7 722 69.0
GSVIVG01001406001 Vitis vinifera HOM05D003952 ORTHO05D005083 9.3e-247 857.8 513 83.0
Cpa.g.sc26.82 Carica papaya HOM05D003952 ORTHO05D005083 2.9e-224 783.1 605 69.9
CDE04G1363 Ceratophyllum demersum HOM05D003952 ORTHO05D005083 3.2e-191 673.3 404 82.4
VMungo0464G1293 Vigna mungo HOM05D003952 ORTHO05D005083 9.0e-149 532.3 331 79.5
AagrBONN_evm.TU.Sc2ySwM_117.1660 Anthoceros agrestis HOM05D003952 ORTHO05D005083 5.6e-127 459.9 804 37.2
TAR381G1674 Trochodendron aralioides HOM05D003952 ORTHO05D005083 2.7e-121 441.0 280 77.5
BraA09t39685Z Brassica rapa HOM05D003952 ORTHO05D005083 2.6e-116 424.5 281 76.9
BolC5t30883H Brassica oleracea HOM05D003952 ORTHO05D005083 4.5e-116 423.7 281 76.9
GSVIVG01001405001 Vitis vinifera HOM05D003952 ORTHO05D005083 1.1e-109 402.5 285 72.3
Psat7g241120 Pisum sativum HOM05D002716 ORTHO05D003324 4.5e-108 397.1 582 43.8
Actinidia04747 Actinidia chinensis HOM05D003952 ORTHO05D005083 1.7e-107 395.2 878 36.1
CBR_g22347 Chara braunii HOM05D003952 ORTHO05D005083 3.2e-106 391.0 1323 28.0
CDE04G3041 Ceratophyllum demersum HOM05D003952 ORTHO05D005083 3.1e-93 347.8 510 44.7
Cpa.g.sc26.81 Carica papaya HOM05D003952 ORTHO05D005083 2.0e-76 292.0 202 69.8
Lsat_1_v5_gn_2_63220 Lactuca sativa HOM05D003952 ORTHO05D005083 2.7e-76 291.6 278 60.8
Lj4A703G54 Lonicera japonica HOM05D003952 ORTHO05D005083 2.9e-75 288.1 199 71.4
COL.COLO4_13782 Corchorus olitorius HOM05D003952 ORTHO05D005083 4.2e-74 284.3 182 74.7
HanXRQChr10g0278641 Helianthus annuus HOM05D003952 ORTHO05D005083 2.8e-70 271.6 205 65.9
CAN.G1225.1 Capsicum annuum HOM05D003952 ORTHO05D008201 1.5e-66 259.2 188 64.9
Lsat_1_v5_gn_8_75660 Lactuca sativa HOM05D003952 ORTHO05D005083 2.1e-65 255.4 259 57.9
Lsat_1_v5_gn_5_129380 Lactuca sativa HOM05D003952 ORTHO05D015589 1.1e-61 243.0 181 72.4
Sopen10g022170 Solanum pennellii HOM05D003952 ORTHO05D011221 1.3e-59 236.1 142 81.7
Lalb_Chr01g0009781 Lupinus albus HOM05D003952 ORTHO05D005083 7.0e-53 213.8 192 60.4
Lsat_1_v5_gn_3_78320 Lactuca sativa HOM05D003952 ORTHO05D005083 7.3e-50 203.8 132 81.8
Psat5g166880 Pisum sativum HOM05D003952 ORTHO05D005083 3.7e-46 191.4 162 63.0
CANSAT25G0696 Cannabis sativa HOM05D003952 ORTHO05D005083 1.4e-45 189.5 118 83.9
Lsat_1_v5_gn_5_64561 Lactuca sativa HOM05D003952 ORTHO05D004515 2.1e-44 185.7 125 76.0
Duzib041G0651 Durio zibethinus HOM05D003952 ORTHO05D005083 3.0e-35 155.2 92 89.1
Psat0s4455g0040 Pisum sativum HOM05D003952 ORTHO05D037363 1.4e-24 119.8 90 68.9
Psat7g010640 Pisum sativum HOM05D003952 ORTHO05D037363 1.4e-24 119.8 90 67.8
Psat7g010720 Pisum sativum HOM05D003952 ORTHO05D037363 1.4e-24 119.8 90 67.8
Nn3g20398 Nelumbo nucifera HOM05D003952 ORTHO05D005083 9.3e-21 107.1 83 67.5
Psat0s2845g0120 Pisum sativum HOM05D004054 ORTHO05D004945 1.2e-20 106.7 79 72.2
Lsat_1_v5_gn_7_62680 Lactuca sativa HOM05D003952 ORTHO05D015589 3.1e-16 92.0 87 56.3
Lsat_1_v5_gn_3_73081 Lactuca sativa HOM05D003952 ORTHO05D015589 3.4e-15 88.6 47 83.0
TPR.G25241 Trifolium pratense HOM05D003952 ORTHO05D048898 1.3e-14 86.7 59 67.8
PGSC0003DMG400001110 Solanum tuberosum HOM05D003952 ORTHO05D005083 3.2e-13 82.0 81 51.9
Lsat_1_v5_gn_5_15721 Lactuca sativa HOM05D001610 ORTHO05D001585 9.3e-13 80.5 115 46.1


User provided reference genes

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