Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1120G093 Amborella trichopoda HOM05D000125 ORTHO05D000807 5.8e-68 261.2 173 100.0
ATR1120G051 Amborella trichopoda HOM05D000790 ORTHO05D000807 5.9e-20 101.7 168 59.5
ATR1120G062 Amborella trichopoda HOM05D000125 ORTHO05D000807 2.8e-14 82.8 87 46.0
Atru.chr9.1573 Acer truncatum HOM05D000125 ORTHO05D000807 5.2e-08 62.0 54 44.4
THA.LOC104827679 Tarenaya hassleriana HOM05D000125 ORTHO05D000807 5.2e-08 62.0 43 53.5
Hma1.2p1_0471F.1_g159410 Hydrangea macrophylla HOM05D000125 ORTHO05D000807 8.8e-08 61.2 46 50.0
Nitab4.5_0006110g0050 Nicotiana tabacum HOM05D000125 ORTHO05D000807 1.2e-07 60.8 53 43.4
HanXRQChr15g0480601 Helianthus annuus HOM05D000125 ORTHO05D000807 1.5e-07 60.5 44 52.3
Dinv07257 Davidia involucrata HOM05D000125 ORTHO05D000807 2.0e-07 60.1 46 47.8
Nitab4.5_0000033g0230 Nicotiana tabacum HOM05D000125 ORTHO05D000807 2.0e-07 60.1 44 52.3
Migut.B01376 Erythranthe guttata HOM05D000125 ORTHO05D000807 2.6e-07 59.7 91 35.2
Nitab4.5_0004855g0030 Nicotiana tabacum HOM05D000125 ORTHO05D000807 2.6e-07 59.7 44 52.3
SalBow5G2336 Salvia bowleyana HOM05D000125 ORTHO05D000807 2.6e-07 59.7 49 46.9
Solyc03g097960.1 Solanum lycopersicum HOM05D000125 ORTHO05D000807 2.6e-07 59.7 54 42.6
Sopen03g028670 Solanum pennellii HOM05D000125 ORTHO05D000807 2.6e-07 59.7 54 42.6
MBI06_g07518_MAGBIO Magnolia biondii HOM05D000125 ORTHO05D000807 3.4e-07 59.3 52 40.4
Nitab4.5_0000430g0110 Nicotiana tabacum HOM05D000125 ORTHO05D000807 3.4e-07 59.3 46 45.7
PGSC0003DMG400033695 Solanum tuberosum HOM05D000125 ORTHO05D000807 3.4e-07 59.3 54 42.6
MSTRG.20618 Avicennia marina HOM05D000125 ORTHO05D000807 4.4e-07 58.9 46 47.8
CSS0026609 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D000807 4.4e-07 58.9 46 47.8
CsaV3_3G032540 Cucumis sativus L. HOM05D000125 ORTHO05D000807 4.4e-07 58.9 56 48.2
PGSC0003DMG400006309 Solanum tuberosum HOM05D000125 ORTHO05D000807 4.4e-07 58.9 51 47.1
FvH4_7g00130 Fragaria vesca HOM05D000125 ORTHO05D000807 5.7e-07 58.5 50 46.0
CAN.G637.38 Capsicum annuum HOM05D000125 ORTHO05D000807 7.5e-07 58.2 54 40.7
Potri.001G229500 Populus trichocarpa HOM05D000125 ORTHO05D000807 7.5e-07 58.2 46 47.8
Sabra12G0026700 Salix brachista HOM05D000125 ORTHO05D000807 7.5e-07 58.2 46 45.7
Nn7g36002 Nelumbo nucifera HOM05D000125 ORTHO05D000807 9.8e-07 57.8 45 48.9
BcaB06g29372 Brassica carinata HOM05D000125 ORTHO05D000807 1.3e-06 57.4 44 45.5
C04p71000 Brassica napus HOM05D000125 ORTHO05D000807 1.3e-06 57.4 44 45.5
ClCG10G012690 Citrullus lanatus HOM05D000125 ORTHO05D000807 1.3e-06 57.4 45 48.9
Duzib264G0325 Durio zibethinus HOM05D000125 ORTHO05D000807 1.3e-06 57.4 47 46.8
FAN01G0619 Fragaria x ananassa HOM05D000125 ORTHO05D000807 1.3e-06 57.4 50 44.0
Solyc06g072460.1 Solanum lycopersicum HOM05D000125 ORTHO05D000807 1.3e-06 57.4 46 47.8
Peaxi162Scf00171g00093 Petunia axillaris HOM05D000125 ORTHO05D000807 1.7e-06 57.0 53 41.5
PGSC0003DMG400027046 Solanum tuberosum HOM05D000125 ORTHO05D000807 1.7e-06 57.0 46 47.8
vmacro13613 Vaccinium macrocarpon HOM05D000125 ORTHO05D000807 1.7e-06 57.0 45 46.7
A03p24800 Brassica napus HOM05D000125 ORTHO05D000807 2.2e-06 56.6 51 43.1
A04p33310 Brassica napus HOM05D000125 ORTHO05D000807 2.2e-06 56.6 44 45.5
BolC4t28604H Brassica oleracea HOM05D000125 ORTHO05D000807 2.2e-06 56.6 44 45.5
BraA03t11686Z Brassica rapa HOM05D000125 ORTHO05D000807 2.2e-06 56.6 51 43.1
COL.COLO4_32004 Corchorus olitorius HOM05D000125 ORTHO05D000807 2.2e-06 56.6 45 46.7
MELO3C023932.2 Cucumis melo HOM05D000125 ORTHO05D000807 2.2e-06 56.6 45 48.9
Eucgr.G03410 Eucalyptus grandis HOM05D000125 ORTHO05D000807 2.2e-06 56.6 46 45.7
FAN01G3158 Fragaria x ananassa HOM05D000125 ORTHO05D000807 2.2e-06 56.6 50 44.0
FAN06G3655 Fragaria x ananassa HOM05D000125 ORTHO05D000807 2.2e-06 56.6 50 44.0
FAN10G3691 Fragaria x ananassa HOM05D000125 ORTHO05D000807 2.2e-06 56.6 50 44.0
Sed0010956 Sechium edule HOM05D000125 ORTHO05D000807 2.2e-06 56.6 45 48.9
BcaB01g03314 Brassica carinata HOM05D000125 ORTHO05D000807 2.8e-06 56.2 51 43.1
Ciclev10024031m.g Citrus clementina HOM05D000125 ORTHO05D000807 2.8e-06 56.2 43 48.8
Oeu027594.1 Olea europaea HOM05D000790 ORTHO05D000769 2.8e-06 56.2 41 51.2
Cc02_g27030 Coffea canephora HOM05D000125 ORTHO05D000807 3.7e-06 55.8 50 44.0
Cc04_g09330 Coffea canephora HOM05D000125 ORTHO05D000807 3.7e-06 55.8 46 43.5
DCAR_015171 Daucus carota HOM05D000125 ORTHO05D000807 3.7e-06 55.8 53 41.5
Prupe.2G003700 Prunus persica HOM05D000125 ORTHO05D000807 3.7e-06 55.8 48 39.6
CAN.G65.96 Capsicum annuum HOM05D000125 ORTHO05D000807 4.9e-06 55.5 46 45.7
Dinv37474 Davidia involucrata HOM05D000125 ORTHO05D011744 4.9e-06 55.5 53 43.4
Dinv43494 Davidia involucrata HOM05D000125 ORTHO05D000807 4.9e-06 55.5 46 47.8
Gohir.D07G225600 Gossypium hirsutum HOM05D000125 ORTHO05D000807 4.9e-06 55.5 45 46.7
Peaxi162Scf01064g00001 Petunia axillaris HOM05D000125 ORTHO05D000807 4.9e-06 55.5 43 46.5
Potri.012G038400 Populus trichocarpa HOM05D000125 ORTHO05D000807 4.9e-06 55.5 55 40.0
QL09p047139 Quercus lobata HOM05D000125 ORTHO05D000120 4.9e-06 55.5 44 47.7
QL09p047154 Quercus lobata HOM05D000125 ORTHO05D000120 4.9e-06 55.5 44 47.7
MSTRG.20616 Avicennia marina HOM05D000125 ORTHO05D000807 6.3e-06 55.1 44 47.7
BcaB06g29373 Brassica carinata HOM05D000125 ORTHO05D000807 6.3e-06 55.1 53 37.7
Lj5P163T50 Lonicera japonica HOM05D000125 ORTHO05D000807 6.3e-06 55.1 45 44.4
Solyc01g073890.3 Solanum lycopersicum HOM05D000125 ORTHO05D000807 6.3e-06 55.1 51 45.1
Duzib147G0906 Durio zibethinus HOM05D000125 ORTHO05D000807 8.3e-06 54.7 45 46.7
Lsat_1_v5_gn_5_163620 Lactuca sativa HOM05D000125 ORTHO05D000807 8.3e-06 54.7 45 44.4


User provided reference genes

Program Settings