Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1120G076 Amborella trichopoda HOM05D007043 ORTHO05D008951 1.3e-102 376.3 188 100.0
Aqoxy5G02008 Aquilegia oxysepala HOM05D007043 ORTHO05D008951 8.8e-78 293.9 188 75.0
TAR625G0503 Trochodendron aralioides HOM05D007043 ORTHO05D008951 1.2e-77 293.5 188 73.9
Potri.005G198400 Populus trichocarpa HOM05D007043 ORTHO05D008951 3.5e-74 282.0 188 70.7
Atru.chr13.1985 Acer truncatum HOM05D007043 ORTHO05D008951 1.0e-73 280.4 189 72.0
ClCG08G007230 Citrullus lanatus HOM05D007043 ORTHO05D008951 2.2e-73 279.3 188 68.6
GSVIVG01013701001 Vitis vinifera HOM05D007043 ORTHO05D008951 2.9e-73 278.9 188 72.3
Cfa018265 Carpinus fangiana HOM05D007043 ORTHO05D008951 1.1e-72 276.9 194 70.6
PSO170G2334 Papaver somniferum HOM05D007043 ORTHO05D008951 1.1e-72 276.9 192 69.3
Sed0011039 Sechium edule HOM05D007043 ORTHO05D008951 1.5e-72 276.6 186 69.9
Ciclev10002599m.g Citrus clementina HOM05D007043 ORTHO05D008951 1.9e-72 276.2 188 70.2
Phvul.007G084700 Phaseolus vulgaris HOM05D007043 ORTHO05D008951 4.2e-72 275.0 188 69.7
HPP92_024076 Vanilla planifolia HOM05D007043 ORTHO05D008951 5.5e-72 274.6 186 69.9
CsaV3_6G004900 Cucumis sativus L. HOM05D007043 ORTHO05D008951 7.2e-72 274.2 188 68.6
Prupe.8G043500 Prunus persica HOM05D007043 ORTHO05D008951 7.2e-72 274.2 188 68.6
RcHm_v2.0_Chr6g0273931 Rosa chinensis HOM05D007043 ORTHO05D008951 7.2e-72 274.2 185 70.8
CDE05G0687 Ceratophyllum demersum HOM05D007043 ORTHO05D008951 9.4e-72 273.9 186 69.9
MELO3C019966.2 Cucumis melo HOM05D007043 ORTHO05D008951 9.4e-72 273.9 188 68.1
Thecc.08G163200 Theobroma cacao HOM05D007043 ORTHO05D008951 9.4e-72 273.9 188 68.6
Duzib093G0431 Durio zibethinus HOM05D007043 ORTHO05D008951 1.2e-71 273.5 188 68.1
PSO210G5925 Papaver somniferum HOM05D007043 ORTHO05D008951 1.2e-71 273.5 192 68.8
Glyma.20G171100 Glycine max HOM05D007043 ORTHO05D008951 2.1e-71 272.7 187 70.1
Gohir.A06G112300 Gossypium hirsutum HOM05D007043 ORTHO05D008951 2.7e-71 272.3 188 66.5
Peaxi162Scf00360g00918 Petunia axillaris HOM05D007043 ORTHO05D008951 4.7e-71 271.6 189 68.8
Haze_17823 Corylus avellana HOM05D007043 ORTHO05D008951 6.1e-71 271.2 187 70.1
arahy.Tifrunner.gnm1.ann1.T4LNKK Arachis hypogaea HOM05D007043 ORTHO05D008951 8.0e-71 270.8 188 67.6
Cpa.g.sc26.119 Carica papaya HOM05D007043 ORTHO05D008951 1.4e-70 270.0 188 67.6
TAR625G0569 Trochodendron aralioides HOM05D007043 ORTHO05D008951 2.3e-70 269.2 188 70.7
Eucgr.F02676 Eucalyptus grandis HOM05D007043 ORTHO05D008951 3.0e-70 268.9 188 66.5
Hma1.2p1_0678F.1_g202140 Hydrangea macrophylla HOM05D007043 ORTHO05D008951 3.0e-70 268.9 191 69.1
Glyma.10G220400 Glycine max HOM05D007043 ORTHO05D008951 4.0e-70 268.5 186 68.3
CiPaw.15G011600 Carya illinoinensis HOM05D007043 ORTHO05D008951 5.2e-70 268.1 186 69.9
unitig_52.g17176 Utricularia gibba HOM05D007043 ORTHO05D008951 6.8e-70 267.7 186 67.2
VMungo0720G3009 Vigna mungo HOM05D007043 ORTHO05D008951 6.8e-70 267.7 186 68.8
Os05g0182201 Oryza sativa ssp. japonica HOM05D007043 ORTHO05D008951 8.8e-70 267.3 184 66.8
Psat6g189600 Pisum sativum HOM05D007043 ORTHO05D008951 1.5e-69 266.5 183 68.9
Migut.N02945 Erythranthe guttata HOM05D007043 ORTHO05D008951 2.0e-69 266.2 188 65.4
Gohir.D06G116500 Gossypium hirsutum HOM05D007043 ORTHO05D008951 2.6e-69 265.8 188 64.4
Gorai.010G134300 Gossypium raimondii HOM05D007043 ORTHO05D008951 2.6e-69 265.8 188 64.4
FAN15G1248 Fragaria x ananassa HOM05D007043 ORTHO05D008951 3.4e-69 265.4 185 68.1
FAN20G1550 Fragaria x ananassa HOM05D007043 ORTHO05D008951 3.4e-69 265.4 185 68.1
FAN24G2827 Fragaria x ananassa HOM05D007043 ORTHO05D008951 4.4e-69 265.0 185 68.1
MD10G1037900 Malus domestica HOM05D007043 ORTHO05D008951 4.4e-69 265.0 190 67.4
arahy.Tifrunner.gnm1.ann1.7K1R9Z Arachis hypogaea HOM05D007043 ORTHO05D008951 5.7e-69 264.6 188 66.5
Medtr1g097460 Medicago truncatula HOM05D007043 ORTHO05D008951 7.5e-69 264.2 188 66.0
SalBow6G0078 Salvia bowleyana HOM05D007043 ORTHO05D008951 9.8e-69 263.8 188 64.9
TWI60G1299 Tripterygium wilfordii HOM05D007043 ORTHO05D008951 9.8e-69 263.8 184 67.4
MD05G1035600 Malus domestica HOM05D007043 ORTHO05D008951 1.3e-68 263.5 190 66.8
Solyc04g072039.1 Solanum lycopersicum HOM05D007043 ORTHO05D008951 2.2e-68 262.7 197 63.5
Cc10_g06450 Coffea canephora HOM05D007043 ORTHO05D008951 3.7e-68 261.9 194 64.9
QL02p036540 Quercus lobata HOM05D007043 ORTHO05D008951 4.8e-68 261.5 195 64.6
QL02p037061 Quercus lobata HOM05D007043 ORTHO05D008951 4.8e-68 261.5 194 64.9
Nitab4.5_0003178g0080 Nicotiana tabacum HOM05D007043 ORTHO05D008951 8.3e-68 260.8 192 66.1
Sopen04g028120 Solanum pennellii HOM05D007043 ORTHO05D008951 8.3e-68 260.8 197 62.9
CAN.G1183.21 Capsicum annuum HOM05D007043 ORTHO05D008951 1.1e-67 260.4 201 62.7
CSS0028309 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 1.8e-67 259.6 191 67.5
CSS0014664 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 5.4e-67 258.1 191 67.0
Hund26674 Selenicereus undatus HOM05D007043 ORTHO05D008951 9.1e-67 257.3 184 65.8
PGSC0003DMG400025055 Solanum tuberosum HOM05D007043 ORTHO05D008951 9.1e-67 257.3 199 61.8
A07p37900 Brassica napus HOM05D007043 ORTHO05D008951 3.5e-66 255.4 186 64.5
BcaC08g46601 Brassica carinata HOM05D007043 ORTHO05D008951 4.5e-66 255.0 186 65.1
C06p45800 Brassica napus HOM05D007043 ORTHO05D008951 4.5e-66 255.0 186 65.1
vmacro21135 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 4.5e-66 255.0 191 67.0
vmacro22650 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 4.5e-66 255.0 191 67.0
AUR62034911 Chenopodium quinoa HOM05D007043 ORTHO05D008951 2.9e-65 252.3 187 62.6
Lalb_Chr02g0141621 Lupinus albus HOM05D007043 ORTHO05D008951 2.9e-65 252.3 184 64.7
SGA_v2.0_scaffold364G49970 Striga asiatica HOM05D007043 ORTHO05D008951 2.9e-65 252.3 187 63.6
Lj5g0012506 Lotus japonicus HOM05D007043 ORTHO05D008951 6.5e-65 251.1 183 65.0
Ah.05g168310 Amaranthus hybridus HOM05D007043 ORTHO05D008951 1.1e-64 250.4 189 64.0
ECA232G2240 Erigeron canadensis HOM05D007043 ORTHO05D008951 1.5e-64 250.0 186 59.1
Aa31LG4G8890 Aethionema arabicum HOM05D007043 ORTHO05D008951 1.9e-64 249.6 188 65.4
SHI09106 Sapria himalayana HOM05D007043 ORTHO05D008951 3.2e-64 248.8 186 62.9
THA.LOC104800095 Tarenaya hassleriana HOM05D007043 ORTHO05D008951 3.2e-64 248.8 185 65.4
BolC6t39632H Brassica oleracea HOM05D007043 ORTHO05D008951 1.6e-63 246.5 197 61.4
AUR62026618 Chenopodium quinoa HOM05D007043 ORTHO05D008951 3.6e-63 245.4 185 62.7
EL10Ac8g19385 Beta vulgaris HOM05D007043 ORTHO05D008951 8.0e-63 244.2 191 62.3
vmacro21134 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.8e-62 243.0 215 59.5
BraA07t31355Z Brassica rapa HOM05D007043 ORTHO05D008951 3.0e-62 242.3 193 60.6
AL2G31320 Arabidopsis lyrata HOM05D007043 ORTHO05D008951 4.0e-62 241.9 186 62.9
Carub.0002s1851 Capsella rubella HOM05D007043 ORTHO05D008951 4.0e-62 241.9 186 61.3
CARHR291040 Cardamine hirsuta HOM05D007043 ORTHO05D008951 5.2e-62 241.5 186 61.8
Thhalv10019190m.g Eutrema salsugineum HOM05D007043 ORTHO05D008951 5.2e-62 241.5 186 62.4
Ca_10649_v3 Cicer arietinum L. HOM05D007043 ORTHO05D008951 8.8e-62 240.7 174 64.4
vmacro22651 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.5e-61 240.0 201 62.2
HanXRQChr11g0320161 Helianthus annuus HOM05D007043 ORTHO05D008951 2.6e-61 239.2 182 61.5
DCAR_016685 Daucus carota HOM05D007043 ORTHO05D008951 3.4e-61 238.8 184 58.2
MBI04_g42205_MAGBIO Magnolia biondii HOM05D007043 ORTHO05D008951 1.3e-60 236.9 260 50.8
AT1G71750 Arabidopsis thaliana HOM05D007043 ORTHO05D008951 1.1e-59 233.8 197 57.9
Nn5g28865 Nelumbo nucifera HOM05D007043 ORTHO05D008951 8.6e-57 224.2 155 68.4
SMO011G0020 Selaginella moellendorffii HOM05D007043 ORTHO05D008951 5.6e-56 221.5 186 57.0
AagrBONN_evm.TU.Sc2ySwM_228.3072 Anthoceros agrestis HOM05D007043 ORTHO05D008951 1.2e-55 220.3 178 57.9
Dinv41024 Davidia involucrata HOM05D007043 ORTHO05D008951 2.1e-55 219.5 134 76.1
Mapoly0053s0101 Marchantia polymorpha HOM05D007043 ORTHO05D008951 2.1e-55 219.5 182 58.2
Actinidia15616 Actinidia chinensis HOM05D007043 ORTHO05D008951 2.8e-55 219.2 172 65.1
Nitab4.5_0003443g0050 Nicotiana tabacum HOM05D007043 ORTHO05D008951 5.2e-54 214.9 153 67.3
Lsat_1_v5_gn_9_42421 Lactuca sativa HOM05D007043 ORTHO05D008951 4.4e-53 211.8 188 58.0
PGR042G2421 Punica granatum HOM05D007043 ORTHO05D008951 2.2e-52 209.5 153 62.7
FvH4_2g12860 Fragaria vesca HOM05D007043 ORTHO05D008951 5.4e-51 204.9 158 63.3
Manes.18G095900 Manihot esculenta HOM05D007043 ORTHO05D008951 1.2e-50 203.8 155 64.5
Zm00001eb282940 Zea mays HOM05D007043 ORTHO05D008951 2.7e-50 202.6 149 62.4
TPR.G17053 Trifolium pratense HOM05D007043 ORTHO05D008951 1.3e-49 200.3 188 53.7
Lj7C386G15 Lonicera japonica HOM05D007043 ORTHO05D004353 6.6e-49 198.0 157 63.7
CANSAT25G3234 Cannabis sativa HOM05D007043 ORTHO05D008951 2.3e-46 189.5 153 58.2
Sc26g0002900 Simmondsia chinensis HOM05D007043 ORTHO05D008951 1.2e-45 187.2 170 57.6
Pp3c20_5410 Physcomitrium patens HOM05D007043 ORTHO05D008951 1.3e-44 183.7 138 60.9
Cre08.g358900 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 8.6e-41 171.0 186 48.9
CBR_g38956 Chara braunii HOM05D007043 ORTHO05D008951 4.7e-39 165.2 190 48.9
Cre17.g708100 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 1.3e-33 147.1 182 45.1
MCO13G296 Micromonas commoda HOM05D007043 ORTHO05D008951 6.6e-33 144.8 189 43.4
Actinidia17764 Actinidia chinensis HOM05D007043 ORTHO05D008951 8.6e-33 144.4 132 58.3
PRCOL_00003632 Prasinoderma coloniale HOM05D007043 ORTHO05D008951 3.1e-30 136.0 181 43.1
TPR.G793 Trifolium pratense HOM05D007043 ORTHO05D008951 8.4e-28 127.9 78 75.6
SGA_v2.0_scaffold364G49968 Striga asiatica HOM05D007043 ORTHO05D008951 1.6e-26 123.6 187 39.6
Sabra05G0151000 Salix brachista HOM05D000032 ORTHO05D004353 5.1e-17 92.0 56 75.0


User provided reference genes

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