Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1120G074 Amborella trichopoda HOM05D003277 ORTHO05D003275 4.9e-61 237.7 122 100.0
ATR1120G144 Amborella trichopoda HOM05D003277 ORTHO05D003275 5.2e-55 217.6 122 89.3
ATR1120G137 Amborella trichopoda HOM05D003277 ORTHO05D003275 9.8e-54 213.4 115 89.6
ATR1120G160 Amborella trichopoda HOM05D003277 ORTHO05D003275 1.2e-51 206.5 122 86.1
ATR1120G013 Amborella trichopoda HOM05D003277 ORTHO05D003275 4.6e-43 177.9 101 88.1
ATR1120G187 Amborella trichopoda HOM05D003277 ORTHO05D003275 1.2e-30 136.7 98 71.4
MBI04_g08935_MAGBIO Magnolia biondii HOM05D003277 ORTHO05D003275 1.8e-15 86.3 126 42.9
Haze_25704 Corylus avellana HOM05D000750 ORTHO05D000714 9.3e-12 73.9 105 42.9
TAR624G0051 Trochodendron aralioides HOM05D003277 ORTHO05D003275 2.1e-11 72.8 110 39.1
Nn8g39213 Nelumbo nucifera HOM05D003277 ORTHO05D003275 4.6e-11 71.6 114 42.1
Sc09g0008990 Simmondsia chinensis HOM05D003277 ORTHO05D003275 6.0e-11 71.2 72 48.6
Cfa003268 Carpinus fangiana HOM05D003277 ORTHO05D003275 1.3e-10 70.1 104 43.3
Thecc.09G038300 Theobroma cacao HOM05D003277 ORTHO05D003275 1.3e-10 70.1 70 50.0
Gohir.A05G049100 Gossypium hirsutum HOM05D003277 ORTHO05D003275 1.8e-10 69.7 68 51.5
Gohir.D05G051000 Gossypium hirsutum HOM05D003277 ORTHO05D003275 1.8e-10 69.7 68 51.5
Gorai.009G052600 Gossypium raimondii HOM05D003277 ORTHO05D003275 1.8e-10 69.7 68 51.5
Nn2g11767 Nelumbo nucifera HOM05D003277 ORTHO05D003275 1.8e-10 69.7 119 38.7
MBI01_g34157_MAGBIO Magnolia biondii HOM05D003277 ORTHO05D003275 3.0e-10 68.9 126 34.9
Gohir.D05G129700 Gossypium hirsutum HOM05D003277 ORTHO05D003275 5.1e-10 68.2 72 48.6
Gorai.009G133500 Gossypium raimondii HOM05D003277 ORTHO05D003275 6.7e-10 67.8 67 50.7
COL.COLO4_30383 Corchorus olitorius HOM05D003277 ORTHO05D003275 1.9e-09 66.2 64 53.1
Glyma.07G087300 Glycine max HOM05D003277 ORTHO05D003275 2.5e-09 65.9 98 37.8
Dinv36618 Davidia involucrata HOM05D003277 ORTHO05D003275 3.3e-09 65.5 102 38.2
Gohir.A05G130300 Gossypium hirsutum HOM05D003277 ORTHO05D003275 3.3e-09 65.5 67 49.3
Prupe.1G454200 Prunus persica HOM05D003277 ORTHO05D003275 3.3e-09 65.5 57 54.4
Potri.003G055100 Populus trichocarpa HOM05D003277 ORTHO05D003275 4.3e-09 65.1 98 38.8
Thecc.06G088500 Theobroma cacao HOM05D003277 ORTHO05D003275 4.3e-09 65.1 64 51.6
CiPaw.08G022600 Carya illinoinensis HOM05D003277 ORTHO05D003275 7.4e-09 64.3 86 39.5
Gohir.A07G024250 Gossypium hirsutum HOM05D003277 ORTHO05D003275 7.4e-09 64.3 69 46.4
Gohir.D07G027850 Gossypium hirsutum HOM05D003277 ORTHO05D003275 7.4e-09 64.3 69 46.4
Gorai.001G029100 Gossypium raimondii HOM05D003277 ORTHO05D003275 7.4e-09 64.3 69 46.4
Medtr3g109430 Medicago truncatula HOM05D003277 ORTHO05D003275 7.4e-09 64.3 82 42.7
Haze_21824 Corylus avellana HOM05D003277 ORTHO05D003275 9.6e-09 63.9 71 49.3
Atru.chr7.2298 Acer truncatum HOM05D003277 ORTHO05D003275 1.3e-08 63.5 67 50.7
Duzib150G1012 Durio zibethinus HOM05D000818 ORTHO05D003275 1.3e-08 63.5 68 48.5
Gorai.001G004600 Gossypium raimondii HOM05D003277 ORTHO05D003275 1.3e-08 63.5 105 37.1
QL05p023505 Quercus lobata HOM05D003277 ORTHO05D003275 1.3e-08 63.5 73 49.3
EL10Ac2g02521 Beta vulgaris HOM05D003277 ORTHO05D003275 1.6e-08 63.2 85 42.4
MELO3C003594.2 Cucumis melo HOM05D003277 ORTHO05D003275 1.6e-08 63.2 77 45.5
CsaV3_3G047340 Cucumis sativus L. HOM05D002580 ORTHO05D002811 1.6e-08 63.2 77 45.5
Duzib235G0396 Durio zibethinus HOM05D003277 ORTHO05D003275 1.6e-08 63.2 63 50.8
Lalb_Chr23g0269371 Lupinus albus HOM05D003277 ORTHO05D003275 1.6e-08 63.2 61 49.2
Manes.04G123700 Manihot esculenta HOM05D003277 ORTHO05D003275 1.6e-08 63.2 74 48.6
Manes.16G066800 Manihot esculenta HOM05D003277 ORTHO05D003275 2.1e-08 62.8 100 38.0
HPP92_002801 Vanilla planifolia HOM05D003277 ORTHO05D003275 2.1e-08 62.8 124 34.7
Cfa013333 Carpinus fangiana HOM05D003277 ORTHO05D003275 2.8e-08 62.4 74 43.2
Cc02_g27850 Coffea canephora HOM05D003277 ORTHO05D003275 2.8e-08 62.4 105 36.2
Glyma.05G231600 Glycine max HOM05D003277 ORTHO05D003275 2.8e-08 62.4 99 38.4
Lj1g0024029 Lotus japonicus HOM05D003277 ORTHO05D003275 2.8e-08 62.4 65 49.2
Phvul.002G313800 Phaseolus vulgaris HOM05D003277 ORTHO05D003275 2.8e-08 62.4 72 47.2
Thecc.09G112200 Theobroma cacao HOM05D003277 ORTHO05D003275 2.8e-08 62.4 69 46.4
VMungo0251G2336 Vigna mungo HOM05D003277 ORTHO05D003275 2.8e-08 62.4 72 47.2
Gohir.D07G005000 Gossypium hirsutum HOM05D003277 ORTHO05D003275 4.8e-08 61.6 52 59.6
QL02p085574 Quercus lobata HOM05D003277 ORTHO05D003275 4.8e-08 61.6 104 38.5
Cc04_g03410 Coffea canephora HOM05D003277 ORTHO05D003275 6.2e-08 61.2 69 43.5
Gohir.A07G006900 Gossypium hirsutum HOM05D003277 ORTHO05D003275 6.2e-08 61.2 107 36.4
Manes.11G047000 Manihot esculenta HOM05D003277 ORTHO05D003275 6.2e-08 61.2 67 49.3
COL.COLO4_18709 Corchorus olitorius HOM05D003277 ORTHO05D003275 8.1e-08 60.8 68 45.6
Oeu033486.1 Olea europaea HOM05D003277 ORTHO05D003275 8.1e-08 60.8 101 37.6
Phvul.009G105000 Phaseolus vulgaris HOM05D003277 ORTHO05D003275 8.1e-08 60.8 63 50.8
Sabra01G0146300 Salix brachista HOM05D003277 ORTHO05D003275 8.1e-08 60.8 77 44.2
Ca_15626_v3 Cicer arietinum L. HOM05D003277 ORTHO05D003275 1.1e-07 60.5 66 45.5
Ciclev10010574m.g Citrus clementina HOM05D003277 ORTHO05D003275 1.1e-07 60.5 74 43.2
COL.COLO4_34902 Corchorus olitorius HOM05D003277 ORTHO05D003275 1.1e-07 60.5 73 43.8
RcHm_v2.0_Chr6g0305601 Rosa chinensis HOM05D003277 ORTHO05D003275 1.1e-07 60.5 70 42.9
ClCG11G013950 Citrullus lanatus HOM05D003277 ORTHO05D003275 1.4e-07 60.1 67 44.8
Ciclev10009982m.g Citrus clementina HOM05D003277 ORTHO05D003275 1.4e-07 60.1 95 40.0
Glyma.14G140500 Glycine max HOM05D003277 ORTHO05D003275 1.4e-07 60.1 36 69.4
Sabra06G0191100 Salix brachista HOM05D003277 ORTHO05D003275 1.4e-07 60.1 63 46.0
TPR.G27852 Trifolium pratense HOM05D003277 ORTHO05D003275 1.4e-07 60.1 72 41.7
Ciclev10026796m.g Citrus clementina HOM05D003277 ORTHO05D003275 1.8e-07 59.7 71 43.7
Duzib150G0682 Durio zibethinus HOM05D003277 ORTHO05D003275 1.8e-07 59.7 69 44.9
CSS0031837 Camellia sinensis var. sinensis HOM05D003277 ORTHO05D003275 2.4e-07 59.3 69 43.5
Glyma.04G079300 Glycine max HOM05D003277 ORTHO05D003275 3.1e-07 58.9 64 50.0
Aqoxy7G01700 Aquilegia oxysepala HOM05D003277 ORTHO05D003275 4.0e-07 58.5 110 36.4
Phvul.005G171100 Phaseolus vulgaris HOM05D003277 ORTHO05D003275 4.0e-07 58.5 62 46.8
Potri.006G244200 Populus trichocarpa HOM05D003277 ORTHO05D003275 5.3e-07 58.2 82 42.7
Actinidia32754 Actinidia chinensis HOM05D003277 ORTHO05D003275 6.9e-07 57.8 70 44.3
Potri.001G180500 Populus trichocarpa HOM05D003277 ORTHO05D003275 6.9e-07 57.8 76 40.8
Prupe.7G229300 Prunus persica HOM05D003277 ORTHO05D003275 6.9e-07 57.8 75 49.3
QL12p026142 Quercus lobata HOM05D003277 ORTHO05D003275 6.9e-07 57.8 38 71.1
TPR.G12111 Trifolium pratense HOM05D003277 ORTHO05D003275 6.9e-07 57.8 63 46.0
CANSAT56G1808 Cannabis sativa HOM05D003277 ORTHO05D003275 9.0e-07 57.4 81 43.2
Cpa.g.sc205.7 Carica papaya HOM05D003277 ORTHO05D003275 9.0e-07 57.4 39 71.8
Psat0s1478g0280 Pisum sativum HOM05D003277 ORTHO05D003275 9.0e-07 57.4 79 38.0
arahy.Tifrunner.gnm1.ann1.R7R2S9 Arachis hypogaea HOM05D003277 ORTHO05D003275 1.2e-06 57.0 74 45.9
FvH4_2g36280 Fragaria vesca HOM05D003277 ORTHO05D003275 1.2e-06 57.0 66 42.4
FAN15G2136 Fragaria x ananassa HOM05D003277 ORTHO05D003275 1.2e-06 57.0 66 42.4
FAN27G2228 Fragaria x ananassa HOM05D003277 ORTHO05D003275 1.2e-06 57.0 66 42.4
Manes.03G064500 Manihot esculenta HOM05D003277 ORTHO05D003275 1.2e-06 57.0 62 48.4
Manes.03G064940 Manihot esculenta HOM05D003277 ORTHO05D003275 1.2e-06 57.0 62 48.4
Sed0006476 Sechium edule HOM05D003277 ORTHO05D003275 1.2e-06 57.0 89 41.6
Glyma.13G359300 Glycine max HOM05D003277 ORTHO05D003275 1.5e-06 56.6 62 46.8
Hma1.2p1_0092F.1_g046645 Hydrangea macrophylla HOM05D003277 ORTHO05D003275 1.5e-06 56.6 97 35.1
TAR636G2419 Trochodendron aralioides HOM05D000750 ORTHO05D000714 1.5e-06 56.6 61 54.1
Atru.chr1.3275 Acer truncatum HOM05D003277 ORTHO05D003275 2.0e-06 56.2 73 39.7
FAN20G0113 Fragaria x ananassa HOM05D003277 ORTHO05D003275 2.0e-06 56.2 66 42.4
Nitab4.5_0002859g0010 Nicotiana tabacum HOM05D003277 ORTHO05D003275 2.0e-06 56.2 92 37.0
Nitab4.5_0014613g0010 Nicotiana tabacum HOM05D003277 ORTHO05D003275 2.0e-06 56.2 76 42.1
Atru.chr7.1333 Acer truncatum HOM05D003277 ORTHO05D003275 2.6e-06 55.8 99 42.4
Eucgr.C02884 Eucalyptus grandis HOM05D003277 ORTHO05D003275 2.6e-06 55.8 34 70.6
Psat7g252120 Pisum sativum HOM05D003277 ORTHO05D003275 2.6e-06 55.8 115 37.4
Glyma.08G206600 Glycine max HOM05D003277 ORTHO05D003275 3.4e-06 55.5 62 46.8
Glyma.15G014600 Glycine max HOM05D003277 ORTHO05D003275 3.4e-06 55.5 62 48.4
Phvul.004G162400 Phaseolus vulgaris HOM05D003277 ORTHO05D003275 3.4e-06 55.5 71 40.8
Phvul.010G150400 Phaseolus vulgaris HOM05D003277 ORTHO05D003275 3.4e-06 55.5 67 43.3
Potri.018G036300 Populus trichocarpa HOM05D003277 ORTHO05D003275 3.4e-06 55.5 64 40.6
Sopen06g025000 Solanum pennellii HOM05D003277 ORTHO05D003275 3.4e-06 55.5 86 38.4
VMungo0331G0823 Vigna mungo HOM05D003277 ORTHO05D003275 3.4e-06 55.5 67 43.3
Glyma.09G189600 Glycine max HOM05D003277 ORTHO05D003275 4.5e-06 55.1 61 41.0
Oeu036629.1 Olea europaea HOM05D003277 ORTHO05D003275 4.5e-06 55.1 68 42.6
AUR62032402 Chenopodium quinoa HOM05D000009 ORTHO05D000008 5.8e-06 54.7 43 58.1
Hma1.2p1_0018F.1_g013430 Hydrangea macrophylla HOM05D003277 ORTHO05D003275 5.8e-06 54.7 102 39.2
PGSC0003DMG400016508 Solanum tuberosum HOM05D003277 ORTHO05D003275 5.8e-06 54.7 62 46.8
Manes.16G117100 Manihot esculenta HOM05D003277 ORTHO05D003275 7.6e-06 54.3 69 40.6
Psat7g252160 Pisum sativum HOM05D003277 ORTHO05D003275 1.0e-05 53.9 52 55.8
Psat7g252200 Pisum sativum HOM05D003277 ORTHO05D003275 1.0e-05 53.9 52 55.8
Prupe.3G070700 Prunus persica HOM05D003277 ORTHO05D003275 1.0e-05 53.9 66 40.9
Sopen03g039050 Solanum pennellii HOM05D003277 ORTHO05D003275 1.0e-05 53.9 95 36.8


User provided reference genes

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