Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1120G022 Amborella trichopoda HOM05D006901 ORTHO05D008582 3.4e-101 371.7 192 100.0
CSS0011226 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.7e-28 130.2 134 59.0
CSS0025966 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.7e-28 130.2 134 59.0
Duzib041G0277 Durio zibethinus HOM05D006901 ORTHO05D008582 1.7e-28 130.2 99 71.7
Gohir.D06G116100 Gossypium hirsutum HOM05D006901 ORTHO05D008582 2.2e-28 129.8 165 50.3
Gorai.010G133900 Gossypium raimondii HOM05D006901 ORTHO05D008582 2.2e-28 129.8 165 50.3
Nn6g32189 Nelumbo nucifera HOM05D006901 ORTHO05D008582 6.5e-28 128.3 97 72.2
ClCG08G007260 Citrullus lanatus HOM05D006901 ORTHO05D008582 1.1e-27 127.5 86 79.1
Dinv02470 Davidia involucrata HOM05D006901 ORTHO05D008582 1.1e-27 127.5 112 63.4
Duzib116G0108 Durio zibethinus HOM05D006901 ORTHO05D008582 1.1e-27 127.5 99 69.7
Potri.002G063100 Populus trichocarpa HOM05D006901 ORTHO05D008582 1.1e-27 127.5 137 57.7
Nn5g28858 Nelumbo nucifera HOM05D006901 ORTHO05D008582 2.5e-27 126.3 169 50.3
Gohir.A06G111900 Gossypium hirsutum HOM05D006901 ORTHO05D008582 4.2e-27 125.6 98 70.4
QL02p036605 Quercus lobata HOM05D006901 ORTHO05D008582 5.5e-27 125.2 146 56.2
TAR376G0851 Trochodendron aralioides HOM05D006901 ORTHO05D008582 5.5e-27 125.2 124 62.9
Lj7E386T0 Lonicera japonica HOM05D006901 ORTHO05D008582 7.2e-27 124.8 84 77.4
PGR102G0180 Punica granatum HOM05D006901 ORTHO05D008582 7.2e-27 124.8 80 80.0
QL02p037117 Quercus lobata HOM05D006901 ORTHO05D008582 7.2e-27 124.8 143 56.6
HPP92_002808 Vanilla planifolia HOM05D006901 ORTHO05D008582 7.2e-27 124.8 88 77.3
HPP92_002865 Vanilla planifolia HOM05D006901 ORTHO05D008582 7.2e-27 124.8 88 77.3
Manes.18G095700 Manihot esculenta HOM05D006901 ORTHO05D008582 9.4e-27 124.4 118 61.0
PGR042G3646 Punica granatum HOM05D006901 ORTHO05D008582 9.4e-27 124.4 126 56.3
TPR.G792 Trifolium pratense HOM05D006901 ORTHO05D008582 9.4e-27 124.4 128 58.6
TWI34G1320 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 9.4e-27 124.4 83 79.5
Hma1.2p1_0678F.1_g202120 Hydrangea macrophylla HOM05D006901 ORTHO05D008582 1.2e-26 124.0 93 69.9
TWI60G0595 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 1.2e-26 124.0 96 71.9
Actinidia17766 Actinidia chinensis HOM05D006901 ORTHO05D008582 1.6e-26 123.6 86 74.4
Cc10_g06470 Coffea canephora HOM05D006901 ORTHO05D008582 1.6e-26 123.6 160 48.8
Psat6g189960 Pisum sativum HOM05D006901 ORTHO05D008582 1.6e-26 123.6 108 67.6
HanXRQChr02g0041271 Helianthus annuus HOM05D006901 ORTHO05D008582 2.1e-26 123.2 84 73.8
Solyc04g072038.1 Solanum lycopersicum HOM05D006901 ORTHO05D008582 2.1e-26 123.2 121 57.9
Sopen04g028100 Solanum pennellii HOM05D006901 ORTHO05D008582 2.1e-26 123.2 121 57.9
ECA247G1717 Erigeron canadensis HOM05D006901 ORTHO05D008582 2.7e-26 122.9 84 71.4
Eucgr.F02679 Eucalyptus grandis HOM05D006901 ORTHO05D008582 2.7e-26 122.9 83 78.3
Potri.005G198100 Populus trichocarpa HOM05D006901 ORTHO05D008582 2.7e-26 122.9 169 50.9
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 2.7e-26 122.9 112 63.4
SEGI_14424 Sequoiadendron giganteum HOM05D006901 ORTHO05D008582 3.6e-26 122.5 100 67.0
Actinidia15615 Actinidia chinensis HOM05D006901 ORTHO05D008582 4.7e-26 122.1 86 75.6
arahy.Tifrunner.gnm1.ann1.96Y3Q8 Arachis hypogaea HOM05D006901 ORTHO05D008582 4.7e-26 122.1 81 80.2
arahy.Tifrunner.gnm1.ann1.YZ7MCJ Arachis hypogaea HOM05D006901 ORTHO05D008582 4.7e-26 122.1 81 80.2
CiPaw.16G007900 Carya illinoinensis HOM05D006901 ORTHO05D008582 8.0e-26 121.3 162 48.8
Glyma.10G220600 Glycine max HOM05D006901 ORTHO05D008582 8.0e-26 121.3 81 79.0
Lsat_1_v5_gn_1_5120 Lactuca sativa HOM05D006901 ORTHO05D008582 8.0e-26 121.3 84 72.6
Medtr1g097570 Medicago truncatula HOM05D006901 ORTHO05D008582 1.0e-25 120.9 98 69.4
PGSC0003DMG400025056 Solanum tuberosum HOM05D006901 ORTHO05D008582 1.0e-25 120.9 114 59.6
Ca_10653_v3 Cicer arietinum L. HOM05D006901 ORTHO05D008582 1.4e-25 120.6 105 63.8
MD10G1037700 Malus domestica HOM05D006901 ORTHO05D008582 1.4e-25 120.6 137 51.8
Thecc.08G162300 Theobroma cacao HOM05D006901 ORTHO05D008582 1.4e-25 120.6 166 49.4
Glyma.20G171000 Glycine max HOM05D006901 ORTHO05D008582 1.8e-25 120.2 81 77.8
MD05G1035400 Malus domestica HOM05D006901 ORTHO05D008582 1.8e-25 120.2 172 45.3
Phvul.007G084500 Phaseolus vulgaris HOM05D006901 ORTHO05D008582 1.8e-25 120.2 127 57.5
Prupe.8G043100 Prunus persica HOM05D006901 ORTHO05D008582 1.8e-25 120.2 128 55.5
Rhsim06G0092600 Rhododendron simsii HOM05D006901 ORTHO05D008582 1.8e-25 120.2 84 75.0
Ciclev10002626m.g Citrus clementina HOM05D006901 ORTHO05D008582 2.3e-25 119.8 121 56.2
Duzib093G0981 Durio zibethinus HOM05D006901 ORTHO05D008582 2.3e-25 119.8 99 68.7
MELO3C019969.2 Cucumis melo HOM05D006901 ORTHO05D008582 5.2e-25 118.6 86 73.3
CsaV3_6G004930 Cucumis sativus L. HOM05D006901 ORTHO05D008582 5.2e-25 118.6 86 73.3
Lj5g0019877 Lotus japonicus HOM05D006901 ORTHO05D008582 8.8e-25 117.9 81 79.0
Lalb_Chr21g0305611 Lupinus albus HOM05D006901 ORTHO05D008582 8.8e-25 117.9 125 55.2
Sed0007149 Sechium edule HOM05D006901 ORTHO05D008582 8.8e-25 117.9 86 73.3
THA.LOC104810483 Tarenaya hassleriana HOM05D006901 ORTHO05D008582 8.8e-25 117.9 113 61.9
Nitab4.5_0003443g0040 Nicotiana tabacum HOM05D006901 ORTHO05D008582 1.2e-24 117.5 93 66.7
Oeu017620.1 Olea europaea HOM05D006901 ORTHO05D008582 1.5e-24 117.1 95 65.3
Aa31LG4G8920 Aethionema arabicum HOM05D006901 ORTHO05D008582 2.0e-24 116.7 129 58.1
CANSAT25G0969 Cannabis sativa HOM05D006901 ORTHO05D008582 2.0e-24 116.7 169 46.7
Cpa.g.sc26.114 Carica papaya HOM05D006901 ORTHO05D008582 2.0e-24 116.7 81 74.1
Nitab4.5_0003178g0070 Nicotiana tabacum HOM05D006901 ORTHO05D008582 2.0e-24 116.7 93 66.7
VMungo0720G0575 Vigna mungo HOM05D006901 ORTHO05D008582 2.0e-24 116.7 105 63.8
Haze_17820 Corylus avellana HOM05D006901 ORTHO05D008582 3.4e-24 115.9 81 74.1
GSVIVG01013704001 Vitis vinifera HOM05D006901 ORTHO05D008582 4.4e-24 115.5 129 59.7
SalBow8G2041 Salvia bowleyana HOM05D006901 ORTHO05D008582 5.7e-24 115.2 184 44.0
MSTRG.22112 Avicennia marina HOM05D006901 ORTHO05D008582 7.5e-24 114.8 93 64.5
FvH4_2g12890 Fragaria vesca HOM05D006901 ORTHO05D008582 7.5e-24 114.8 86 68.6
FAN24G1802 Fragaria x ananassa HOM05D006901 ORTHO05D008582 7.5e-24 114.8 86 68.6
PSO675G2506 Papaver somniferum HOM05D006901 ORTHO05D008582 9.8e-24 114.4 135 51.9
FAN15G3138 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.3e-23 114.0 86 68.6
FAN20G0005 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.3e-23 114.0 86 68.6
RcHm_v2.0_Chr6g0273991 Rosa chinensis HOM05D006901 ORTHO05D008582 1.3e-23 114.0 103 62.1
Sabra05G0150900 Salix brachista HOM05D006901 ORTHO05D008582 1.3e-23 114.0 141 53.2
SalBow7G3034 Salvia bowleyana HOM05D006901 ORTHO05D008582 1.3e-23 114.0 154 49.4
SGA_v2.0_scaffold82G26198 Striga asiatica HOM05D006901 ORTHO05D008582 1.3e-23 114.0 83 69.9
FAN27G3188 Fragaria x ananassa HOM05D006901 ORTHO05D008582 2.2e-23 113.2 86 68.6
CAN.G1183.19 Capsicum annuum HOM05D006901 ORTHO05D008582 3.7e-23 112.5 93 63.4
BolC6t39630H Brassica oleracea HOM05D006901 ORTHO05D008582 4.8e-23 112.1 95 64.2
BcaC08g46599 Brassica carinata HOM05D006901 ORTHO05D008582 6.3e-23 111.7 95 64.2
C06p45780 Brassica napus HOM05D006901 ORTHO05D008582 6.3e-23 111.7 95 64.2
CARHR291060 Cardamine hirsuta HOM05D006901 ORTHO05D008582 6.3e-23 111.7 157 45.9
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 8.3e-23 111.3 80 75.0
Peaxi162Scf00360g00917 Petunia axillaris HOM05D006901 ORTHO05D008582 8.3e-23 111.3 148 46.6
PSO541G2877 Papaver somniferum HOM05D006901 ORTHO05D008582 1.1e-22 110.9 138 51.4
Pp3c17_20520 Physcomitrium patens HOM05D006901 ORTHO05D008582 1.1e-22 110.9 80 70.0
Carub.0002s1849 Capsella rubella HOM05D006901 ORTHO05D008582 1.4e-22 110.5 102 58.8
Sc02g0003760 Simmondsia chinensis HOM05D006901 ORTHO05D008582 1.4e-22 110.5 86 67.4
Atru.chr13.1989 Acer truncatum HOM05D006901 ORTHO05D008582 1.8e-22 110.2 83 71.1
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 1.8e-22 110.2 80 75.0
A07p37880 Brassica napus HOM05D006901 ORTHO05D008582 1.8e-22 110.2 95 63.2
BraA07t31353Z Brassica rapa HOM05D006901 ORTHO05D008582 1.8e-22 110.2 95 63.2
Thhalv10019220m.g Eutrema salsugineum HOM05D006901 ORTHO05D008582 1.8e-22 110.2 98 61.2
Ah.16g108540 Amaranthus hybridus HOM05D006901 ORTHO05D008582 2.4e-22 109.8 143 49.7
EL10Ac1g01620 Beta vulgaris HOM05D006901 ORTHO05D008582 2.4e-22 109.8 80 73.8
AT1G71730 Arabidopsis thaliana HOM05D006901 ORTHO05D008582 3.1e-22 109.4 102 57.8
unitig_32.g11111 Utricularia gibba HOM05D006901 ORTHO05D008582 3.1e-22 109.4 93 62.4
AagrBONN_evm.TU.Sc2ySwM_228.5132 Anthoceros agrestis HOM05D006901 ORTHO05D008582 1.2e-21 107.5 120 54.2
CSS0012150 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.2e-21 107.5 80 67.5
Sp5g26760 Schrenkiella parvula HOM05D006901 ORTHO05D008582 1.6e-21 107.1 150 44.7
AL2G31300 Arabidopsis lyrata HOM05D006901 ORTHO05D008582 2.0e-21 106.7 143 46.9
Os05g0182000 Oryza sativa ssp. japonica HOM05D006901 ORTHO05D008582 1.9e-19 100.1 91 62.6
SMO351G0406 Selaginella moellendorffii HOM05D006901 ORTHO05D008582 1.9e-19 100.1 81 63.0
Zm00001eb346910 Zea mays HOM05D006901 ORTHO05D008582 3.3e-19 99.4 81 65.4
CBR_g54341 Chara braunii HOM05D006901 ORTHO05D008582 1.2e-18 97.4 109 52.3
DCAR_001194 Daucus carota HOM05D006901 ORTHO05D008582 1.4e-17 94.0 64 73.4
Lj5g0009364 Lotus japonicus HOM05D006901 ORTHO05D008582 1.4e-17 94.0 81 69.1
MCO05G280 Micromonas commoda HOM05D006901 ORTHO05D008582 8.3e-15 84.7 83 53.0
CSS0007119 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.2e-13 80.9 84 54.8
CSS0023453 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.9e-12 76.3 84 52.4
Cre03.g176500 Chlamydomonas reinhardtii HOM05D006901 ORTHO05D008582 8.0e-10 68.2 79 48.1
Ah.08g214420 Amaranthus hybridus HOM05D006901 ORTHO05D008582 9.8e-08 61.2 44 68.2


User provided reference genes

Program Settings