Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1101G105 Amborella trichopoda HOM05D003787 ORTHO05D001736 5.1e-74 281.2 162 100.0
ATR1128G053 Amborella trichopoda HOM05D003787 ORTHO05D001736 1.2e-54 216.9 151 88.1
ATR0177G031 Amborella trichopoda HOM05D003787 ORTHO05D001736 2.5e-52 209.1 142 77.5
ATR1101G066 Amborella trichopoda HOM05D003787 ORTHO05D001736 7.0e-31 137.9 81 86.4
TAR374G1256 Trochodendron aralioides HOM05D003787 ORTHO05D001736 7.0e-15 84.7 148 42.6
MBI19_g14007_MAGBIO Magnolia biondii HOM05D006637 ORTHO05D001736 3.5e-14 82.4 144 43.8
TAR622G0628 Trochodendron aralioides HOM05D003787 ORTHO05D001736 2.5e-12 76.3 155 38.7
CiPaw.05G124800 Carya illinoinensis HOM05D003787 ORTHO05D001736 1.8e-10 70.1 150 38.7
CDE05G3272 Ceratophyllum demersum HOM05D003787 ORTHO05D001736 2.3e-10 69.7 144 37.5
QL03p074082 Quercus lobata HOM05D003787 ORTHO05D001736 2.3e-10 69.7 160 34.4
Duzib251G0768 Durio zibethinus HOM05D003787 ORTHO05D001736 3.0e-10 69.3 143 39.9
Nn3g17457 Nelumbo nucifera HOM05D003787 ORTHO05D001736 3.0e-10 69.3 156 39.1
FAN07G1127 Fragaria x ananassa HOM05D005972 ORTHO05D007548 1.2e-09 67.4 157 37.6
Lalb_Chr06g0174951 Lupinus albus HOM05D003787 ORTHO05D001736 1.5e-09 67.0 84 50.0
FAN12G3642 Fragaria x ananassa HOM05D005972 ORTHO05D007548 4.4e-09 65.5 150 38.7
Aqoxy3G00509 Aquilegia oxysepala HOM05D006637 ORTHO05D001736 5.7e-09 65.1 142 35.2
ClCG05G023700 Citrullus lanatus HOM05D003787 ORTHO05D001736 5.7e-09 65.1 152 38.8
Thecc.02G330000 Theobroma cacao HOM05D003787 ORTHO05D001736 5.7e-09 65.1 141 36.9
PSO017G7320 Papaver somniferum HOM05D006637 ORTHO05D001736 7.5e-09 64.7 146 35.6
Prupe.1G287500 Prunus persica HOM05D003787 ORTHO05D001736 7.5e-09 64.7 152 38.2
Eucgr.I02036 Eucalyptus grandis HOM05D003787 ORTHO05D001736 9.8e-09 64.3 144 35.4
PSO478G0913 Papaver somniferum HOM05D006637 ORTHO05D001736 9.8e-09 64.3 162 35.2
MELO3C012154.2 Cucumis melo HOM05D003787 ORTHO05D001736 1.3e-08 63.9 156 35.3
FAN22G0001 Fragaria x ananassa HOM05D003787 ORTHO05D001736 1.3e-08 63.9 155 37.4
MD16G1060800 Malus domestica HOM05D003787 ORTHO05D001736 1.3e-08 63.9 150 37.3
GSVIVG01012223001 Vitis vinifera HOM05D003787 ORTHO05D001736 1.3e-08 63.9 152 38.2
Dinv33830 Davidia involucrata HOM05D003787 ORTHO05D001736 1.7e-08 63.5 41 73.2
RcHm_v2.0_Chr4g0438271 Rosa chinensis HOM05D003787 ORTHO05D001736 1.7e-08 63.5 142 35.9
Rhsim10G0049700 Rhododendron simsii HOM05D003787 ORTHO05D001736 2.2e-08 63.2 165 33.3
Sabra17G0083100 Salix brachista HOM05D003787 ORTHO05D001736 2.2e-08 63.2 80 48.8
TAR371G0370 Trochodendron aralioides HOM05D006637 ORTHO05D001736 2.2e-08 63.2 155 36.8
CANSAT64G2286 Cannabis sativa HOM05D003787 ORTHO05D001736 2.8e-08 62.8 161 46.6
Cfa007670 Carpinus fangiana HOM05D003787 ORTHO05D001736 2.8e-08 62.8 150 34.0
CDE02G2765 Ceratophyllum demersum HOM05D003787 ORTHO05D001736 2.8e-08 62.8 56 57.1
Manes.02G055200 Manihot esculenta HOM05D003787 ORTHO05D001736 2.8e-08 62.8 55 61.8
SHI15724 Sapria himalayana HOM05D003787 ORTHO05D001736 2.8e-08 62.8 160 33.8
TWI60G0888 Tripterygium wilfordii HOM05D003787 ORTHO05D001736 2.8e-08 62.8 148 35.8
ATR1128G085 Amborella trichopoda HOM05D003787 ORTHO05D001736 3.7e-08 62.4 31 96.8
Duzib268G1106 Durio zibethinus HOM05D003787 ORTHO05D001736 4.9e-08 62.0 142 36.6
FvH4_4g29990 Fragaria vesca HOM05D003787 ORTHO05D001736 4.9e-08 62.0 150 37.3
Os07g0298100 Oryza sativa ssp. japonica HOM05D003787 ORTHO05D001736 4.9e-08 62.0 43 65.1
TAR629G2847 Trochodendron aralioides HOM05D003787 ORTHO05D001736 4.9e-08 62.0 158 38.0
Migut.K01274 Erythranthe guttata HOM05D003787 ORTHO05D001736 8.3e-08 61.2 47 63.8
SHI06685 Sapria himalayana HOM05D003787 ORTHO05D001736 8.3e-08 61.2 78 46.2
Potri.010G158000 Populus trichocarpa HOM05D003787 ORTHO05D001736 1.1e-07 60.8 153 35.3
Lj2g0021607 Lotus japonicus HOM05D003787 ORTHO05D001736 1.4e-07 60.5 160 32.5
TWI81G0402 Tripterygium wilfordii HOM05D006637 ORTHO05D001736 1.4e-07 60.5 169 30.8
Atru.chr9.567 Acer truncatum HOM05D006637 ORTHO05D001736 1.8e-07 60.1 51 56.9
Actinidia17586 Actinidia chinensis HOM05D003787 ORTHO05D001736 1.8e-07 60.1 145 32.4
ClCG11G004790 Citrullus lanatus HOM05D003787 ORTHO05D001736 1.8e-07 60.1 53 64.2
Lju41C3T13 Lonicera japonica HOM05D003787 ORTHO05D001736 1.8e-07 60.1 45 68.9
PGR119G1736 Punica granatum HOM05D003787 ORTHO05D001736 1.8e-07 60.1 142 31.7
Sabra08G0072600 Salix brachista HOM05D003787 ORTHO05D001736 1.8e-07 60.1 151 34.4
CDE04G2454 Ceratophyllum demersum HOM05D003787 ORTHO05D001736 2.4e-07 59.7 41 73.2
Nitab4.5_0007320g0010 Nicotiana tabacum HOM05D003787 ORTHO05D001736 2.4e-07 59.7 164 32.3
PGR004G1779 Punica granatum HOM05D003787 ORTHO05D001736 2.4e-07 59.7 174 29.9
TWI79G0236 Tripterygium wilfordii HOM05D003787 ORTHO05D001736 2.4e-07 59.7 161 36.0
Glyma.13G056300 Glycine max HOM05D003787 ORTHO05D001736 3.1e-07 59.3 82 41.5
Potri.008G096300 Populus trichocarpa HOM05D003787 ORTHO05D001736 3.1e-07 59.3 151 34.4
SGA_v2.0_scaffold52G19142 Striga asiatica HOM05D003787 ORTHO05D001736 3.1e-07 59.3 141 32.6
Thecc.04G095900 Theobroma cacao HOM05D003787 ORTHO05D001736 3.1e-07 59.3 38 71.1
HPP92_003197 Vanilla planifolia HOM05D003787 ORTHO05D001736 3.1e-07 59.3 146 35.6
HPP92_011441 Vanilla planifolia HOM05D003787 ORTHO05D001736 3.1e-07 59.3 153 33.3
MELO3C022033.2 Cucumis melo HOM05D003787 ORTHO05D001736 4.1e-07 58.9 73 47.9
Gohir.D04G043300 Gossypium hirsutum HOM05D003787 ORTHO05D001736 4.1e-07 58.9 64 48.4
Gorai.012G048600 Gossypium raimondii HOM05D003787 ORTHO05D001736 4.1e-07 58.9 64 48.4
Sabra10G0120000 Salix brachista HOM05D003787 ORTHO05D001736 4.1e-07 58.9 146 36.3
Potri.017G094300 Populus trichocarpa HOM05D003787 ORTHO05D001736 5.4e-07 58.5 62 50.0
Gohir.A05G372300 Gossypium hirsutum HOM05D003787 ORTHO05D001736 7.0e-07 58.2 64 48.4
Potri.004G120400 Populus trichocarpa HOM05D003787 ORTHO05D001736 7.0e-07 58.2 60 55.0
Potri.012G061700 Populus trichocarpa HOM05D006637 ORTHO05D001736 7.0e-07 58.2 152 32.9
Dinv16736 Davidia involucrata HOM05D003787 ORTHO05D001736 9.2e-07 57.8 59 54.2
Lalb_Chr02g0158901 Lupinus albus HOM05D003787 ORTHO05D001736 9.2e-07 57.8 80 42.5
Peaxi162Scf00166g00047 Petunia axillaris HOM05D003787 ORTHO05D001736 9.2e-07 57.8 45 66.7
Aqoxy3G03685 Aquilegia oxysepala HOM05D006637 ORTHO05D001736 1.2e-06 57.4 149 34.2
Cpa.g.sc14.178 Carica papaya HOM05D003787 ORTHO05D001736 1.2e-06 57.4 46 63.0
MD13G1062500 Malus domestica HOM05D003787 ORTHO05D001736 1.2e-06 57.4 146 36.3
Nitab4.5_0003841g0060 Nicotiana tabacum HOM05D003787 ORTHO05D001736 1.2e-06 57.4 53 58.5
Zm00001eb305470 Zea mays HOM05D003787 ORTHO05D001736 1.2e-06 57.4 34 73.5
CsaV3_5G038510 Cucumis sativus L. HOM05D003787 ORTHO05D001736 2.0e-06 56.6 51 62.7
Manes.01G096200 Manihot esculenta HOM05D003787 ORTHO05D001736 2.0e-06 56.6 76 43.4
SGA_v2.0_scaffold148G36413 Striga asiatica HOM05D003787 ORTHO05D001736 2.0e-06 56.6 37 70.3
Ca_04304_v3 Cicer arietinum L. HOM05D003787 ORTHO05D001736 2.7e-06 56.2 36 77.8
Nn4g23435 Nelumbo nucifera HOM05D006637 ORTHO05D001736 2.7e-06 56.2 54 63.0
Oeu007068.1 Olea europaea HOM05D003787 ORTHO05D001736 2.7e-06 56.2 159 30.8
Sed0011679 Sechium edule HOM05D003787 ORTHO05D001736 2.7e-06 56.2 41 68.3
HPP92_007004 Vanilla planifolia HOM05D003787 ORTHO05D001736 2.7e-06 56.2 43 65.1
Cpa.g.sc10.158 Carica papaya HOM05D006637 ORTHO05D001736 3.5e-06 55.8 154 30.5
CsaV3_5G033340 Cucumis sativus L. HOM05D003787 ORTHO05D001736 3.5e-06 55.8 156 34.0
MD09G1067000 Malus domestica HOM05D003787 ORTHO05D001736 3.5e-06 55.8 35 74.3
unitig_32.g11770 Utricularia gibba HOM05D003787 ORTHO05D001736 3.5e-06 55.8 144 34.0
CSS0023913 Camellia sinensis var. sinensis HOM05D003787 ORTHO05D001736 4.5e-06 55.5 35 80.0
Cpa.g.sc1.128 Carica papaya HOM05D003787 ORTHO05D001736 4.5e-06 55.5 75 45.3
Haze_14428 Corylus avellana HOM05D003787 ORTHO05D001736 4.5e-06 55.5 147 32.0
Lj2g0027532 Lotus japonicus HOM05D014318 ORTHO05D001736 4.5e-06 55.5 84 40.5
SGA_v2.0_scaffold154G37113 Striga asiatica HOM05D003787 ORTHO05D001736 4.5e-06 55.5 34 73.5
VMungo0464G0106 Vigna mungo HOM05D003787 ORTHO05D001736 4.5e-06 55.5 78 42.3
Lalb_Chr21g0318351 Lupinus albus HOM05D003787 ORTHO05D001736 5.9e-06 55.1 35 68.6
DCAR_024124 Daucus carota HOM05D003787 ORTHO05D001736 7.7e-06 54.7 148 33.8
Gorai.003G101400 Gossypium raimondii HOM05D006637 ORTHO05D001736 7.7e-06 54.7 81 42.0
PSO017G1216 Papaver somniferum HOM05D006637 ORTHO05D001736 7.7e-06 54.7 172 32.0
Prupe.3G254700 Prunus persica HOM05D003787 ORTHO05D001736 7.7e-06 54.7 36 69.4
Sabra04G0069600 Salix brachista HOM05D003787 ORTHO05D001736 7.7e-06 54.7 74 43.2
Sabra12G0044700 Salix brachista HOM05D006637 ORTHO05D001736 7.7e-06 54.7 156 32.7


User provided reference genes

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