Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1101G093 Amborella trichopoda HOM05D010587 ORTHO05D000630 4.9e-194 681.0 357 100.0
ATR1101G002 Amborella trichopoda HOM05D010587 ORTHO05D000630 1.6e-141 506.5 365 78.4
ATR1101G107 Amborella trichopoda HOM05D010587 ORTHO05D001526 1.3e-133 480.3 390 68.2
ATR0874G001 Amborella trichopoda HOM05D010587 ORTHO05D000630 4.4e-110 402.1 331 67.7
ATR1128G018 Amborella trichopoda HOM05D010587 ORTHO05D001526 1.1e-108 397.5 268 77.6
ATR0730G014 Amborella trichopoda HOM05D010587 ORTHO05D000630 2.3e-103 379.8 389 56.6
ATR1101G089 Amborella trichopoda HOM05D010587 ORTHO05D000630 2.3e-103 379.8 328 65.2
ATR0500G001 Amborella trichopoda HOM05D010587 ORTHO05D001526 1.2e-59 234.6 138 88.4
ATR1128G013 Amborella trichopoda HOM05D010587 ORTHO05D065745 4.6e-59 232.6 141 91.5
ATR1128G063 Amborella trichopoda HOM05D010587 ORTHO05D000630 2.8e-56 223.4 238 56.7
ATR1128G021 Amborella trichopoda HOM05D010587 ORTHO05D001526 3.1e-55 219.9 178 67.4
ATR0751G124 Amborella trichopoda HOM05D010587 ORTHO05D001526 6.2e-48 195.7 197 54.3
ATR0069G053 Amborella trichopoda HOM05D010587 ORTHO05D001526 3.1e-47 193.4 130 79.2
ATR0069G047 Amborella trichopoda HOM05D010587 ORTHO05D000630 1.3e-42 177.9 191 53.4
ATR0730G217 Amborella trichopoda HOM05D010587 ORTHO05D001526 1.3e-42 177.9 148 64.9
ATR1134G039 Amborella trichopoda HOM05D010587 ORTHO05D001526 1.1e-31 141.7 102 75.5
CSS0016853 Camellia sinensis var. sinensis HOM05D000174 ORTHO05D000630 4.6e-11 73.2 52 53.8
CSS0041839 Camellia sinensis var. sinensis HOM05D008543 ORTHO05D000630 4.6e-11 73.2 52 53.8
Sc16g0010820 Simmondsia chinensis HOM05D008543 ORTHO05D000630 1.1e-09 68.6 36 69.4
Dinv40916 Davidia involucrata HOM05D008543 ORTHO05D000630 3.3e-09 67.0 41 63.4
TAR636G0894 Trochodendron aralioides HOM05D008543 ORTHO05D000630 4.3e-09 66.6 39 64.1
DCAR_017611 Daucus carota HOM05D000174 ORTHO05D000630 9.7e-09 65.5 47 53.2
Lj8C183G11 Lonicera japonica HOM05D000174 ORTHO05D000630 1.3e-08 65.1 50 52.0
CAN.G623.74 Capsicum annuum HOM05D008543 ORTHO05D000630 1.7e-08 64.7 35 68.6
Nitab4.5_0000152g0060 Nicotiana tabacum HOM05D008543 ORTHO05D000630 2.2e-08 64.3 36 66.7
Actinidia30352 Actinidia chinensis HOM05D008543 ORTHO05D000630 2.8e-08 63.9 64 43.8
SGA_v2.0_scaffold11G05961 Striga asiatica HOM05D010587 ORTHO05D000630 2.8e-08 63.9 109 31.2
CSS0027724 Camellia sinensis var. sinensis HOM05D008543 ORTHO05D000630 3.7e-08 63.5 44 61.4
Cc05_g15710 Coffea canephora HOM05D000174 ORTHO05D000630 3.7e-08 63.5 34 67.6
C01p03620 Brassica napus HOM05D001927 ORTHO05D001972 4.8e-08 63.2 185 30.3
Rhsim06G0235100 Rhododendron simsii HOM05D000174 ORTHO05D000630 4.8e-08 63.2 33 69.7
Nitab4.5_0009408g0010 Nicotiana tabacum HOM05D008543 ORTHO05D000630 6.3e-08 62.8 34 67.6
BolC1t00353H Brassica oleracea HOM05D000174 ORTHO05D001526 8.2e-08 62.4 129 35.7
PSO675G1550 Papaver somniferum HOM05D000174 ORTHO05D000630 8.2e-08 62.4 45 60.0
CAN.G1085.7 Capsicum annuum HOM05D000174 ORTHO05D000630 1.1e-07 62.0 48 52.1
Cc01_g06930 Coffea canephora HOM05D000174 ORTHO05D000630 1.1e-07 62.0 38 57.9
MD03G1043000 Malus domestica HOM05D000174 ORTHO05D000630 1.1e-07 62.0 38 60.5
Prupe.6G035400 Prunus persica HOM05D000174 ORTHO05D000630 1.1e-07 62.0 51 49.0
MD11G1046000 Malus domestica HOM05D000174 ORTHO05D000630 1.4e-07 61.6 35 65.7
Nitab4.5_0003570g0030 Nicotiana tabacum HOM05D008543 ORTHO05D000630 1.4e-07 61.6 134 29.9
Aqoxy4G02266 Aquilegia oxysepala HOM05D000174 ORTHO05D000630 1.8e-07 61.2 39 61.5
HanXRQChr13g0409261 Helianthus annuus HOM05D000174 ORTHO05D000630 1.8e-07 61.2 47 53.2
Manes.02G113100 Manihot esculenta HOM05D008569 ORTHO05D010111 1.8e-07 61.2 52 55.8
CiPaw.11G210700 Carya illinoinensis HOM05D000174 ORTHO05D000630 2.4e-07 60.8 35 68.6
Sopen11g029860 Solanum pennellii HOM05D000174 ORTHO05D000630 2.4e-07 60.8 58 43.1
PSO541G5961 Papaver somniferum HOM05D000174 ORTHO05D000630 3.1e-07 60.5 45 57.8
Peaxi162Scf00232g00062 Petunia axillaris HOM05D008543 ORTHO05D000630 3.1e-07 60.5 37 62.2
TAR627G0908 Trochodendron aralioides HOM05D000174 ORTHO05D000630 3.1e-07 60.5 44 59.1
GSVIVG01014844001 Vitis vinifera HOM05D000174 ORTHO05D000630 3.1e-07 60.5 64 40.6
Lsat_1_v5_gn_9_88600 Lactuca sativa HOM05D000174 ORTHO05D000630 4.1e-07 60.1 54 55.6
Nn1g07630 Nelumbo nucifera HOM05D000174 ORTHO05D000630 4.1e-07 60.1 32 71.9
Solyc11g072210.1 Solanum lycopersicum HOM05D000174 ORTHO05D000630 4.1e-07 60.1 58 43.1
ECA240G0792 Erigeron canadensis HOM05D000174 ORTHO05D000630 5.3e-07 59.7 39 59.0
PGSC0003DMG400034376 Solanum tuberosum HOM05D000174 ORTHO05D000630 5.3e-07 59.7 43 53.5
CDE03G0095 Ceratophyllum demersum HOM05D056667 ORTHO05D000630 6.9e-07 59.3 80 37.5
HanXRQChr03g0079361 Helianthus annuus HOM05D000174 ORTHO05D000630 6.9e-07 59.3 168 28.6
Oeu052885.1 Olea europaea HOM05D008543 ORTHO05D000630 6.9e-07 59.3 44 52.3
QL08p000516 Quercus lobata HOM05D000174 ORTHO05D000630 6.9e-07 59.3 49 53.1
GSVIVG01037363001 Vitis vinifera HOM05D000174 ORTHO05D001526 6.9e-07 59.3 40 57.5
Haze_09916 Corylus avellana HOM05D000174 ORTHO05D000630 9.1e-07 58.9 35 68.6
Oeu006263.1 Olea europaea HOM05D008543 ORTHO05D000630 9.1e-07 58.9 46 54.3
Pp3c21_440 Physcomitrium patens HOM05D000174 ORTHO05D001526 9.1e-07 58.9 49 55.1
AUR62033207 Chenopodium quinoa HOM05D000174 ORTHO05D001526 1.2e-06 58.5 48 54.2
AUR62033209 Chenopodium quinoa HOM05D000174 ORTHO05D001526 1.2e-06 58.5 48 54.2
PGSC0003DMG400022147 Solanum tuberosum HOM05D008543 ORTHO05D000630 1.2e-06 58.5 243 25.9
Nitab4.5_0000205g0040 Nicotiana tabacum HOM05D059491 ORTHO05D000630 1.5e-06 58.2 32 68.8
Pp3c19_21390 Physcomitrium patens HOM05D000174 ORTHO05D001526 1.5e-06 58.2 46 54.3
Gohir.A01G175000 Gossypium hirsutum HOM05D000174 ORTHO05D001526 2.0e-06 57.8 60 46.7
Gohir.D02G231400 Gossypium hirsutum HOM05D000174 ORTHO05D001526 2.0e-06 57.8 91 39.6
Gorai.005G259000 Gossypium raimondii HOM05D000174 ORTHO05D001526 2.0e-06 57.8 91 39.6
Pp3c18_22010 Physcomitrium patens HOM05D000174 ORTHO05D001526 2.0e-06 57.8 52 50.0
Zm00001eb199290 Zea mays HOM05D000174 ORTHO05D001526 2.0e-06 57.8 34 64.7
AagrBONN_evm.TU.Sc2ySwM_228.1248 Anthoceros agrestis HOM05D000174 ORTHO05D001526 2.6e-06 57.4 172 26.7
CiPaw.13G145500 Carya illinoinensis HOM05D008543 ORTHO05D000630 2.6e-06 57.4 39 56.4
Ah.01g023730 Amaranthus hybridus HOM05D000174 ORTHO05D001526 3.4e-06 57.0 38 60.5
ATR0030G031 Amborella trichopoda HOM05D010587 ORTHO05D067289 3.4e-06 57.0 86 46.5
Gohir.A03G209700 Gossypium hirsutum HOM05D000174 ORTHO05D001526 3.4e-06 57.0 91 38.5
HPP92_003504 Vanilla planifolia HOM05D000174 ORTHO05D001526 3.4e-06 57.0 36 61.1
Duzib132G0848 Durio zibethinus HOM05D000174 ORTHO05D001526 4.5e-06 56.6 49 53.1
MBI15_g44395_MAGBIO Magnolia biondii HOM05D000174 ORTHO05D000630 4.5e-06 56.6 125 29.6
Sopen10g025660 Solanum pennellii HOM05D011325 ORTHO05D000630 4.5e-06 56.6 40 52.5
HPP92_014994 Vanilla planifolia HOM05D000174 ORTHO05D001526 4.5e-06 56.6 34 64.7
Actinidia10593 Actinidia chinensis HOM05D000174 ORTHO05D000630 5.9e-06 56.2 187 26.2
Cfa016961 Carpinus fangiana HOM05D000174 ORTHO05D000630 5.9e-06 56.2 34 67.6
ECA246G3372 Erigeron canadensis HOM05D000174 ORTHO05D001526 5.9e-06 56.2 57 47.4
Lalb_Chr22g0352391 Lupinus albus HOM05D000174 ORTHO05D001526 5.9e-06 56.2 34 67.6
Lalb_Chr22g0352401 Lupinus albus HOM05D000174 ORTHO05D001526 5.9e-06 56.2 34 67.6
Oeu032036.1 Olea europaea HOM05D011325 ORTHO05D000630 5.9e-06 56.2 56 39.3
Oeu052027.2 Olea europaea HOM05D000784 ORTHO05D000116 5.9e-06 56.2 74 41.9
Rhsim11G0197100 Rhododendron simsii HOM05D000174 ORTHO05D001526 5.9e-06 56.2 34 67.6
SGA_v2.0_scaffold7G03548 Striga asiatica HOM05D008543 ORTHO05D000630 5.9e-06 56.2 49 46.9
Atru.chr5.3548 Acer truncatum HOM05D000174 ORTHO05D001526 7.7e-06 55.8 32 68.8
AL3G50040 Arabidopsis lyrata HOM05D000174 ORTHO05D001526 7.7e-06 55.8 34 64.7
MBI14_g12738_MAGBIO Magnolia biondii HOM05D000174 ORTHO05D000630 7.7e-06 55.8 38 57.9
Pp3c22_2200 Physcomitrium patens HOM05D000174 ORTHO05D001526 7.7e-06 55.8 185 28.6
Sopen10g026890 Solanum pennellii HOM05D011325 ORTHO05D000630 7.7e-06 55.8 58 39.7
PGSC0003DMG401000796 Solanum tuberosum HOM05D000174 ORTHO05D001526 7.7e-06 55.8 56 50.0


User provided reference genes

Program Settings