Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1100G019 Amborella trichopoda HOM05D009392 ORTHO05D012298 1.1e-135 486.5 229 100.0
ATR1133G058 Amborella trichopoda HOM05D000176 ORTHO05D000106 2.4e-69 266.2 280 52.9
ATR0605G002 Amborella trichopoda HOM05D000176 ORTHO05D000106 5.2e-48 195.3 193 53.4
ATR0706G186 Amborella trichopoda HOM05D000176 ORTHO05D000106 9.8e-47 191.0 178 55.6
ATR0620G119 Amborella trichopoda HOM05D000176 ORTHO05D000106 5.6e-42 175.3 232 47.8
ATR0620G144 Amborella trichopoda HOM05D009392 ORTHO05D012298 4.4e-39 165.6 198 46.5
ATR0602G081 Amborella trichopoda HOM05D009392 ORTHO05D012298 2.2e-38 163.3 142 60.6
ATR0787G001 Amborella trichopoda HOM05D009392 ORTHO05D000106 4.9e-38 162.2 238 42.0
ATR0745G057 Amborella trichopoda HOM05D000176 ORTHO05D011301 5.0e-35 152.1 146 53.4
ATR0322G026 Amborella trichopoda HOM05D009392 ORTHO05D012298 1.8e-32 143.7 157 49.0
ATR0776G005 Amborella trichopoda HOM05D009392 ORTHO05D012298 6.6e-27 125.2 236 36.4
ATR0584G287 Amborella trichopoda HOM05D001245 ORTHO05D005230 1.2e-25 120.9 173 39.3
ATR0332G037 Amborella trichopoda HOM05D000176 ORTHO05D000106 3.1e-24 116.3 103 60.2
ATR0598G098 Amborella trichopoda HOM05D009392 ORTHO05D012298 3.2e-21 106.3 139 48.2
ATR0096G001 Amborella trichopoda HOM05D009392 ORTHO05D012298 7.1e-21 105.1 72 69.4
ATR0322G025 Amborella trichopoda HOM05D000176 ORTHO05D000106 2.7e-20 103.2 178 39.9
ATR0030G016 Amborella trichopoda HOM05D009392 ORTHO05D011301 3.9e-19 99.4 50 84.0
ATR0012G047 Amborella trichopoda HOM05D000176 ORTHO05D000106 3.3e-18 96.3 84 58.3
ATR0598G009 Amborella trichopoda HOM05D007095 ORTHO05D008898 9.6e-18 94.7 240 29.2
ATR0686G053 Amborella trichopoda HOM05D009392 ORTHO05D012298 9.6e-18 94.7 49 81.6
ATR0177G019 Amborella trichopoda HOM05D009392 ORTHO05D011301 1.4e-16 90.9 108 46.3
ATR0827G097 Amborella trichopoda HOM05D000176 ORTHO05D011301 1.4e-16 90.9 193 32.6
ATR0594G014 Amborella trichopoda HOM05D007095 ORTHO05D008898 2.4e-16 90.1 218 33.0
ATR0624G012 Amborella trichopoda HOM05D009392 ORTHO05D008898 4.9e-14 82.4 116 40.5
ATR0044G038 Amborella trichopoda HOM05D007095 ORTHO05D008898 1.1e-13 81.3 207 29.5
ATR0629G103 Amborella trichopoda HOM05D007095 ORTHO05D008898 2.4e-13 80.1 185 30.8
ATR0716G068 Amborella trichopoda HOM05D009392 ORTHO05D012298 4.2e-13 79.3 161 32.9
ATR0320G029 Amborella trichopoda HOM05D007095 ORTHO05D008898 7.8e-12 75.1 98 40.8
ATR0213G002 Amborella trichopoda HOM05D000176 ORTHO05D011301 1.3e-11 74.3 49 65.3
ATR0564G468 Amborella trichopoda HOM05D007095 ORTHO05D008898 1.9e-10 70.5 186 30.1
ATR0594G218 Amborella trichopoda HOM05D007095 ORTHO05D000106 1.9e-10 70.5 196 27.0
ATR0804G046 Amborella trichopoda HOM05D007095 ORTHO05D000106 1.9e-10 70.5 194 31.4
ATR0782G155 Amborella trichopoda HOM05D009392 ORTHO05D012298 3.3e-10 69.7 52 65.4
ATR0752G076 Amborella trichopoda HOM05D009392 ORTHO05D012298 9.6e-10 68.2 41 80.5
ATR0598G252 Amborella trichopoda HOM05D007095 ORTHO05D008898 1.6e-09 67.4 158 29.7
ATR0626G085 Amborella trichopoda HOM05D007095 ORTHO05D008898 1.6e-09 67.4 104 35.6
ATR0618G361 Amborella trichopoda HOM05D007095 ORTHO05D008898 3.6e-09 66.2 140 31.4
ATR0624G111 Amborella trichopoda HOM05D007095 ORTHO05D008898 8.1e-09 65.1 189 28.6
ATR1134G114 Amborella trichopoda HOM05D000176 ORTHO05D008898 8.1e-09 65.1 98 38.8
ATR0807G189 Amborella trichopoda HOM05D009392 ORTHO05D012298 1.4e-08 64.3 41 73.2
ATR0759G046 Amborella trichopoda HOM05D007095 ORTHO05D008898 1.8e-08 63.9 98 39.8
ATR0326G005 Amborella trichopoda HOM05D000176 ORTHO05D000106 2.4e-08 63.5 98 37.8
ATR1127G160 Amborella trichopoda HOM05D007095 ORTHO05D008898 2.4e-08 63.5 98 35.7
ATR0317G020 Amborella trichopoda HOM05D007095 ORTHO05D008898 3.1e-08 63.2 157 29.3
ATR0602G213 Amborella trichopoda HOM05D007095 ORTHO05D008898 3.1e-08 63.2 160 28.8
ATR0594G092 Amborella trichopoda HOM05D009392 ORTHO05D012298 5.3e-08 62.4 39 74.4
ATR0712G034 Amborella trichopoda HOM05D007095 ORTHO05D008898 5.3e-08 62.4 100 35.0
CANSAT56G1843 Cannabis sativa HOM05D000176 ORTHO05D000106 5.3e-08 62.4 214 26.6
GSVIVG01017117001 Vitis vinifera HOM05D000176 ORTHO05D003511 5.3e-08 62.4 78 39.7
ATR0629G053 Amborella trichopoda HOM05D007095 ORTHO05D008898 6.9e-08 62.0 98 37.8
ATR0071G035 Amborella trichopoda HOM05D007095 ORTHO05D008898 1.5e-07 60.8 68 42.6
ATR0568G225 Amborella trichopoda HOM05D000176 ORTHO05D008898 1.5e-07 60.8 97 38.1
ATR0589G076 Amborella trichopoda HOM05D000176 ORTHO05D000106 2.0e-07 60.5 70 41.4
ATR0752G235 Amborella trichopoda HOM05D007095 ORTHO05D008898 2.6e-07 60.1 187 26.7
ATR0300G001 Amborella trichopoda HOM05D007095 ORTHO05D000106 4.4e-07 59.3 103 34.0
HanXRQChr09g0246821 Helianthus annuus HOM05D000176 ORTHO05D000106 7.6e-07 58.5 78 41.0
Ah.16g107440 Amaranthus hybridus HOM05D000176 ORTHO05D000106 9.9e-07 58.2 63 41.3
ATR0751G178 Amborella trichopoda HOM05D009392 ORTHO05D012298 9.9e-07 58.2 37 70.3
Rhsim06G0121800 Rhododendron simsii HOM05D000176 ORTHO05D000106 9.9e-07 58.2 78 37.2
EL10As19g24186 Beta vulgaris HOM05D000176 ORTHO05D000106 1.3e-06 57.8 63 41.3
AUR62038386 Chenopodium quinoa HOM05D000176 ORTHO05D000106 1.3e-06 57.8 63 41.3
AUR62038389 Chenopodium quinoa HOM05D000176 ORTHO05D000106 1.3e-06 57.8 63 41.3
CSS0028049 Camellia sinensis var. sinensis HOM05D001875 ORTHO05D000106 2.2e-06 57.0 78 37.2
CSS0045164 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.2e-06 57.0 78 37.2
Lj2C590G2 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-06 57.0 147 29.3
ATR0594G129 Amborella trichopoda HOM05D007095 ORTHO05D008898 2.9e-06 56.6 98 33.7
Ciclev10014335m.g Citrus clementina HOM05D000176 ORTHO05D000106 3.8e-06 56.2 78 38.5
Lj3C925T6 Lonicera japonica HOM05D000176 ORTHO05D000106 3.8e-06 56.2 78 38.5
Oeu063771.2 Olea europaea HOM05D000176 ORTHO05D000106 3.8e-06 56.2 83 38.6
Sabra01G0157300 Salix brachista HOM05D000176 ORTHO05D000106 3.8e-06 56.2 240 26.2
ECA240G4387 Erigeron canadensis HOM05D000176 ORTHO05D000106 4.9e-06 55.8 78 39.7
Solyc05g056010.3 Solanum lycopersicum HOM05D000176 ORTHO05D000106 4.9e-06 55.8 78 37.2
Sopen05g034420 Solanum pennellii HOM05D000176 ORTHO05D000106 4.9e-06 55.8 78 37.2
PGSC0003DMG400023346 Solanum tuberosum HOM05D000176 ORTHO05D000106 4.9e-06 55.8 78 37.2
CSS0002500 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.4e-06 55.5 79 38.0
CSS0014815 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.4e-06 55.5 79 38.0
Lsat_1_v5_gn_7_67341 Lactuca sativa HOM05D000176 ORTHO05D000106 6.4e-06 55.5 78 38.5
Nitab4.5_0000476g0120 Nicotiana tabacum HOM05D000176 ORTHO05D000106 6.4e-06 55.5 78 35.9


User provided reference genes

Program Settings