Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1098G148 Amborella trichopoda HOM05D002924 ORTHO05D003122 2.3e-73 278.9 146 100.0
ATR0559G372 Amborella trichopoda HOM05D002924 ORTHO05D003122 2.1e-34 149.4 161 64.6
Gohir.A09G077300 Gossypium hirsutum HOM05D002924 ORTHO05D003122 9.4e-11 70.9 104 48.1
HanXRQChr15g0482111 Helianthus annuus HOM05D002924 ORTHO05D003122 9.4e-11 70.9 103 49.5
ECA236G5022 Erigeron canadensis HOM05D002924 ORTHO05D003122 1.2e-10 70.5 103 49.5
Rhsim13G0114700 Rhododendron simsii HOM05D002924 ORTHO05D003122 1.2e-10 70.5 118 46.6
Nitab4.5_0001531g0050 Nicotiana tabacum HOM05D002924 ORTHO05D003122 1.6e-10 70.1 114 50.0
GSVIVG01021516001 Vitis vinifera HOM05D002924 ORTHO05D003122 1.6e-10 70.1 106 49.1
Thecc.06G148600 Theobroma cacao HOM05D002924 ORTHO05D003122 2.7e-10 69.3 104 51.0
Actinidia07706 Actinidia chinensis HOM05D002924 ORTHO05D003122 3.6e-10 68.9 123 43.1
Eucgr.E02416 Eucalyptus grandis HOM05D002924 ORTHO05D003122 3.6e-10 68.9 111 45.0
Gohir.D09G077300 Gossypium hirsutum HOM05D002924 ORTHO05D003122 4.7e-10 68.6 104 49.0
Gorai.006G092400 Gossypium raimondii HOM05D002924 ORTHO05D003122 4.7e-10 68.6 104 49.0
Cc00_g01970 Coffea canephora HOM05D002924 ORTHO05D003122 6.1e-10 68.2 104 48.1
GSVIVG01007188001 Vitis vinifera HOM05D002924 ORTHO05D003122 6.1e-10 68.2 106 49.1
MD05G1282000 Malus domestica HOM05D002924 ORTHO05D003122 8.0e-10 67.8 124 42.7
TWI09G0754 Tripterygium wilfordii HOM05D002924 ORTHO05D003122 1.0e-09 67.4 115 46.1
TAR624G0146 Trochodendron aralioides HOM05D002924 ORTHO05D003122 1.0e-09 67.4 120 42.5
Sed0024828 Sechium edule HOM05D002924 ORTHO05D003122 1.4e-09 67.0 130 40.8
GSVIVG01021514001 Vitis vinifera HOM05D002924 ORTHO05D003122 3.0e-09 65.9 103 48.5
Potri.006G023301 Populus trichocarpa HOM05D002924 ORTHO05D003122 4.0e-09 65.5 138 40.6
vmacro03333 Vaccinium macrocarpon HOM05D002924 ORTHO05D003122 4.0e-09 65.5 121 45.5
Manes.15G122900 Manihot esculenta HOM05D002924 ORTHO05D003122 5.2e-09 65.1 127 40.2
Nitab4.5_0009991g0010 Nicotiana tabacum HOM05D002924 ORTHO05D003122 5.2e-09 65.1 124 45.2
Dinv05213 Davidia involucrata HOM05D002924 ORTHO05D003122 6.7e-09 64.7 106 48.1
Duzib160G0328 Durio zibethinus HOM05D002924 ORTHO05D003122 8.8e-09 64.3 128 45.3
TWI53G0343 Tripterygium wilfordii HOM05D002924 ORTHO05D003122 8.8e-09 64.3 104 46.2
ClCG01G024700 Citrullus lanatus HOM05D002924 ORTHO05D003122 1.2e-08 63.9 102 45.1
Gohir.D05G150200 Gossypium hirsutum HOM05D002924 ORTHO05D003122 1.2e-08 63.9 127 42.5
Nitab4.5_0001531g0020 Nicotiana tabacum HOM05D002924 ORTHO05D003122 1.2e-08 63.9 122 42.6
CsaV3_6G051810 Cucumis sativus L. HOM05D002924 ORTHO05D003122 1.5e-08 63.5 109 44.0
COL.COLO4_31051 Corchorus olitorius HOM05D002924 ORTHO05D003122 2.0e-08 63.2 129 39.5
Gohir.A10G041900 Gossypium hirsutum HOM05D002924 ORTHO05D003122 2.0e-08 63.2 124 42.7
Gohir.D10G042800 Gossypium hirsutum HOM05D002924 ORTHO05D003122 2.0e-08 63.2 124 43.5
Solyc08g036660.4 Solanum lycopersicum HOM05D002924 ORTHO05D003122 2.0e-08 63.2 125 40.0
Duzib235G1474 Durio zibethinus HOM05D002924 ORTHO05D003122 2.6e-08 62.8 127 41.7
Gorai.009G154300 Gossypium raimondii HOM05D002924 ORTHO05D003122 2.6e-08 62.8 127 43.3
Manes.17G071600 Manihot esculenta HOM05D002924 ORTHO05D003122 2.6e-08 62.8 103 48.5
MELO3C007125.2 Cucumis melo HOM05D002924 ORTHO05D003122 3.3e-08 62.4 109 43.1
Gohir.A05G147700 Gossypium hirsutum HOM05D002924 ORTHO05D003122 3.3e-08 62.4 127 42.5
SalBow8G3543 Salvia bowleyana HOM05D002924 ORTHO05D003122 3.3e-08 62.4 128 41.4
Sed0008794 Sechium edule HOM05D002924 ORTHO05D003122 3.3e-08 62.4 108 42.6
Actinidia18522 Actinidia chinensis HOM05D002924 ORTHO05D003122 4.4e-08 62.0 105 43.8
PGSC0003DMG400001178 Solanum tuberosum HOM05D002924 ORTHO05D003122 4.4e-08 62.0 122 41.0
Atru.chr10.1192 Acer truncatum HOM05D002924 ORTHO05D003122 5.7e-08 61.6 102 49.0
arahy.Tifrunner.gnm1.ann1.IG3UT7 Arachis hypogaea HOM05D002924 ORTHO05D003122 5.7e-08 61.6 123 38.2
CANSAT35G0631 Cannabis sativa HOM05D002924 ORTHO05D003122 5.7e-08 61.6 109 44.0
DCAR_007884 Daucus carota HOM05D002924 ORTHO05D003122 5.7e-08 61.6 111 43.2
Gorai.011G045300 Gossypium raimondii HOM05D002924 ORTHO05D003122 5.7e-08 61.6 124 42.7
Sopen08g011410 Solanum pennellii HOM05D002924 ORTHO05D003122 5.7e-08 61.6 125 39.2
Dinv32237 Davidia involucrata HOM05D002924 ORTHO05D003122 7.5e-08 61.2 104 47.1
Lsat_1_v5_gn_7_28101 Lactuca sativa HOM05D002924 ORTHO05D003122 7.5e-08 61.2 119 38.7
Sabra11G0066500 Salix brachista HOM05D002924 ORTHO05D003122 7.5e-08 61.2 121 44.6
PGSC0003DMG400008782 Solanum tuberosum HOM05D002924 ORTHO05D003122 7.5e-08 61.2 149 36.9
Potri.011G083900 Populus trichocarpa HOM05D002924 ORTHO05D003122 9.7e-08 60.8 114 47.4
Actinidia39583 Actinidia chinensis HOM05D002924 ORTHO05D003122 1.3e-07 60.5 111 40.5
Aqoxy1G01686 Aquilegia oxysepala HOM05D002924 ORTHO05D003122 1.3e-07 60.5 129 41.1
ClCG03G006750 Citrullus lanatus HOM05D002924 ORTHO05D003122 1.7e-07 60.1 107 40.2
Ciclev10017198m.g Citrus clementina HOM05D002924 ORTHO05D003122 1.7e-07 60.1 132 40.9
MBI02_g15229_MAGBIO Magnolia biondii HOM05D002924 ORTHO05D003122 2.2e-07 59.7 118 39.0
MSTRG.16253 Avicennia marina HOM05D002924 ORTHO05D003122 2.8e-07 59.3 101 45.5
CSS0028188 Camellia sinensis var. sinensis HOM05D002924 ORTHO05D003122 2.8e-07 59.3 120 43.3
Migut.H01355 Erythranthe guttata HOM05D002924 ORTHO05D003122 2.8e-07 59.3 124 38.7
QL05p059253 Quercus lobata HOM05D002924 ORTHO05D003122 2.8e-07 59.3 115 45.2
Peaxi162Scf00317g00117 Petunia axillaris HOM05D002924 ORTHO05D003122 3.7e-07 58.9 145 36.6
PGR031G1937 Punica granatum HOM05D002924 ORTHO05D003122 3.7e-07 58.9 100 41.0
Sopen08g011370 Solanum pennellii HOM05D002924 ORTHO05D003122 3.7e-07 58.9 121 41.3
TAR488G0001 Trochodendron aralioides HOM05D002924 ORTHO05D003122 3.7e-07 58.9 103 48.5
CiPaw.09G122300 Carya illinoinensis HOM05D002924 ORTHO05D003122 4.8e-07 58.5 100 47.0
Oeu031277.1 Olea europaea HOM05D002924 ORTHO05D003122 4.8e-07 58.5 119 40.3
PSO675G3356 Papaver somniferum HOM05D002924 ORTHO05D003122 4.8e-07 58.5 126 39.7
TAR626G0560 Trochodendron aralioides HOM05D002924 ORTHO05D003122 4.8e-07 58.5 122 39.3
MSTRG.14778 Avicennia marina HOM05D002924 ORTHO05D003122 6.3e-07 58.2 103 43.7
Glyma.08G096500 Glycine max HOM05D002924 ORTHO05D003122 6.3e-07 58.2 104 45.2
QL05p057398 Quercus lobata HOM05D002924 ORTHO05D003122 6.3e-07 58.2 115 44.3
Cpa.g.sc17.12 Carica papaya HOM05D002924 ORTHO05D003122 8.2e-07 57.8 102 43.1
CDE01G0236 Ceratophyllum demersum HOM05D002924 ORTHO05D003122 8.2e-07 57.8 139 38.1
Nn4g26591 Nelumbo nucifera HOM05D002924 ORTHO05D003122 8.2e-07 57.8 101 45.5
Peaxi162Scf00317g00121 Petunia axillaris HOM05D002924 ORTHO05D003122 8.2e-07 57.8 127 38.6
MBI02_g15230_MAGBIO Magnolia biondii HOM05D002924 ORTHO05D003122 1.1e-06 57.4 121 40.5
MD10G1260700 Malus domestica HOM05D002924 ORTHO05D003122 1.1e-06 57.4 118 39.8
TAR626G1845 Trochodendron aralioides HOM05D002924 ORTHO05D003122 1.1e-06 57.4 103 46.6
Solyc08g036620.4 Solanum lycopersicum HOM05D002924 ORTHO05D003122 1.4e-06 57.0 122 41.0
Glyma.05G141200 Glycine max HOM05D002924 ORTHO05D003122 1.8e-06 56.6 107 45.8
Peaxi162Scf00394g00120 Petunia axillaris HOM05D002924 ORTHO05D003122 1.8e-06 56.6 127 39.4
MSTRG.7496 Avicennia marina HOM05D002924 ORTHO05D003122 2.4e-06 56.2 102 42.2
CDE12G0054 Ceratophyllum demersum HOM05D002924 ORTHO05D003122 2.4e-06 56.2 140 37.9
HanXRQChr04g0114381 Helianthus annuus HOM05D002924 ORTHO05D003122 2.4e-06 56.2 102 42.2
MD05G1282100 Malus domestica HOM05D002924 ORTHO05D003122 2.4e-06 56.2 126 41.3
Nitab4.5_0005246g0010 Nicotiana tabacum HOM05D002924 ORTHO05D003122 2.4e-06 56.2 133 39.8
PGSC0003DMG400001174 Solanum tuberosum HOM05D002924 ORTHO05D003122 2.4e-06 56.2 146 36.3
MBI02_g15233_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.1e-06 55.5 112 42.0
Psat1g194920 Pisum sativum HOM05D002924 ORTHO05D003122 4.1e-06 55.5 104 43.3
Prupe.4G082500 Prunus persica HOM05D002924 ORTHO05D003122 5.3e-06 55.1 104 44.2
Sed0009253 Sechium edule HOM05D002924 ORTHO05D003122 5.3e-06 55.1 114 37.7
GSVIVG01021519001 Vitis vinifera HOM05D002924 ORTHO05D003122 5.3e-06 55.1 100 42.0
FAN21G3281 Fragaria x ananassa HOM05D002924 ORTHO05D003122 7.0e-06 54.7 115 41.7
Sed0007473 Sechium edule HOM05D002924 ORTHO05D003122 7.0e-06 54.7 126 37.3
CAN.G50.1 Capsicum annuum HOM05D002924 ORTHO05D003122 9.1e-06 54.3 125 39.2
Eucgr.D00289 Eucalyptus grandis HOM05D002924 ORTHO05D003122 9.1e-06 54.3 140 37.1
Lj6g0009882 Lotus japonicus HOM05D002924 ORTHO05D003122 9.1e-06 54.3 107 42.1
unitig_26.g9758 Utricularia gibba HOM05D002924 ORTHO05D003122 9.1e-06 54.3 113 38.9


User provided reference genes

Program Settings