Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 3.8e-87 325.1 202 100.0
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 1.3e-31 140.6 102 68.6
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 3.9e-31 139.0 108 62.0
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 1.5e-30 137.1 114 60.5
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 1.5e-30 137.1 99 66.7
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 2.5e-30 136.3 103 65.0
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 4.3e-30 135.6 102 64.7
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 4.3e-30 135.6 108 61.1
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 4.3e-30 135.6 103 66.0
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 7.3e-30 134.8 111 58.6
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 7.3e-30 134.8 107 63.6
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 1.6e-29 133.7 104 63.5
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 2.8e-29 132.9 100 67.0
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 3.6e-29 132.5 111 57.7
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 3.6e-29 132.5 107 62.6
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 4.8e-29 132.1 102 64.7
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 4.8e-29 132.1 100 62.0
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 4.8e-29 132.1 103 63.1
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 6.2e-29 131.7 100 63.0
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 6.2e-29 131.7 102 64.7
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 6.2e-29 131.7 100 65.0
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 8.1e-29 131.3 100 64.0
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 1.1e-28 131.0 104 62.5
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 1.1e-28 131.0 100 63.0
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 1.4e-28 130.6 113 56.6
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 1.4e-28 130.6 95 64.2
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 1.8e-28 130.2 101 62.4
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 2.4e-28 129.8 99 64.6
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 3.1e-28 129.4 113 58.4
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 4.0e-28 129.0 111 55.9
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 6.9e-28 128.3 107 59.8
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 6.9e-28 128.3 110 55.5
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 6.9e-28 128.3 107 61.7
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 9.0e-28 127.9 93 66.7
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 1.2e-27 127.5 98 66.3
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 1.2e-27 127.5 98 61.2
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 1.2e-27 127.5 104 59.6
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 1.5e-27 127.1 99 60.6
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 2.6e-27 126.3 110 54.5
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 2.6e-27 126.3 126 52.4
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 3.4e-27 125.9 102 57.8
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 3.4e-27 125.9 124 53.2
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 3.4e-27 125.9 124 53.2
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 4.5e-27 125.6 111 56.8
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 4.5e-27 125.6 109 56.0
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 5.8e-27 125.2 98 60.2
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 5.8e-27 125.2 96 65.6
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 7.6e-27 124.8 111 55.9
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 7.6e-27 124.8 99 59.6
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 9.9e-27 124.4 110 53.6
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 1.7e-26 123.6 90 72.2
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 2.2e-26 123.2 101 58.4
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 4.9e-26 122.1 104 58.7
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 6.4e-26 121.7 108 55.6
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 8.4e-26 121.3 101 59.4
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 8.4e-26 121.3 99 60.6
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 8.4e-26 121.3 97 61.9
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 1.9e-25 120.2 101 57.4
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 2.4e-25 119.8 104 55.8
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 3.2e-25 119.4 104 57.7
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 3.2e-25 119.4 104 55.8
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 5.4e-25 118.6 100 59.0
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 7.1e-25 118.2 95 60.0
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 7.1e-25 118.2 99 57.6
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 9.3e-25 117.9 106 54.7
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 1.2e-24 117.5 97 59.8
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 1.2e-24 117.5 97 58.8
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 1.6e-24 117.1 103 52.4
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 2.1e-24 116.7 100 58.0
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 2.7e-24 116.3 106 52.8
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 4.6e-24 115.5 103 53.4
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 6.0e-24 115.2 92 60.9
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 6.0e-24 115.2 92 60.9
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 6.0e-24 115.2 92 60.9
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 6.0e-24 115.2 92 60.9
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 1.0e-23 114.4 92 58.7
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 1.0e-23 114.4 111 53.2
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 1.3e-23 114.0 103 51.5
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 1.3e-23 114.0 134 47.0
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 1.8e-23 113.6 107 53.3
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 1.8e-23 113.6 92 59.8
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 2.3e-23 113.2 96 57.3
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 2.3e-23 113.2 102 53.9
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 3.0e-23 112.8 105 56.2
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 5.1e-23 112.1 92 59.8
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 6.7e-23 111.7 104 52.9
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 1.1e-22 110.9 93 59.1
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 1.9e-22 110.2 99 58.6
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 1.9e-22 110.2 110 46.4
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 2.5e-22 109.8 101 55.4
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 1.6e-21 107.1 84 58.3
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 2.8e-21 106.3 94 57.4
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 3.7e-21 105.9 78 69.2
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 6.2e-21 105.1 93 55.9
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 8.1e-21 104.8 98 53.1
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 2.4e-20 103.2 107 48.6
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 4.0e-20 102.4 114 50.0
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 2.6e-19 99.8 92 53.3
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 3.4e-19 99.4 136 40.4
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 1.7e-18 97.1 90 56.7
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 8.4e-18 94.7 94 52.1
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 1.4e-17 94.0 68 70.6
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 3.2e-17 92.8 93 50.5
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 4.2e-17 92.4 89 52.8
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 5.5e-17 92.0 101 46.5
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 6.0e-16 88.6 90 47.8
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 3.0e-15 86.3 56 73.2
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 5.1e-15 85.5 69 63.8
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 8.7e-15 84.7 89 47.2
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 1.9e-14 83.6 91 46.2
AagrBONN_evm.TU.Sc2ySwM_228.2782 Anthoceros agrestis HOM05D007055 ORTHO05D008943 2.4e-12 76.6 91 42.9
SMO367G1177 Selaginella moellendorffii HOM05D007055 ORTHO05D008943 2.0e-11 73.6 83 45.8


User provided reference genes

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