Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1098G108 Amborella trichopoda HOM05D005499 ORTHO05D006666 1.8e-61 239.2 131 100.0
Nn4g24319 Nelumbo nucifera HOM05D005499 ORTHO05D006666 1.8e-37 159.5 115 72.2
SalBow7G4317 Salvia bowleyana HOM05D005499 ORTHO05D006666 1.8e-37 159.5 132 66.7
FAN05G0237 Fragaria x ananassa HOM05D005499 ORTHO05D006666 6.9e-37 157.5 120 70.0
FAN05G2282 Fragaria x ananassa HOM05D005499 ORTHO05D006666 6.9e-37 157.5 120 70.0
COL.COLO4_29287 Corchorus olitorius HOM05D005499 ORTHO05D006666 9.0e-37 157.1 113 74.3
FvH4_6g02050 Fragaria vesca HOM05D005499 ORTHO05D006666 9.0e-37 157.1 120 70.0
FAN05G1403 Fragaria x ananassa HOM05D005499 ORTHO05D006666 9.0e-37 157.1 120 70.0
FAN09G0379 Fragaria x ananassa HOM05D005499 ORTHO05D006666 9.0e-37 157.1 120 70.0
FAN14G4216 Fragaria x ananassa HOM05D005499 ORTHO05D006666 9.0e-37 157.1 120 70.0
DCAR_011296 Daucus carota HOM05D005499 ORTHO05D006666 1.5e-36 156.4 122 66.4
FAN05G4095 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.0e-36 156.0 120 69.2
Dinv33378 Davidia involucrata HOM05D005499 ORTHO05D006666 3.4e-36 155.2 118 71.2
Gohir.A10G160300 Gossypium hirsutum HOM05D005499 ORTHO05D006666 3.4e-36 155.2 97 78.4
Lalb_Chr21g0317581 Lupinus albus HOM05D005499 ORTHO05D006666 3.4e-36 155.2 97 80.4
CiPaw.03G051000 Carya illinoinensis HOM05D005499 ORTHO05D006666 4.4e-36 154.8 98 81.6
Cc10_g08070 Coffea canephora HOM05D005499 ORTHO05D006666 4.4e-36 154.8 117 71.8
Duzib187G1007 Durio zibethinus HOM05D005499 ORTHO05D006666 4.4e-36 154.8 113 72.6
Migut.K01440 Erythranthe guttata HOM05D005499 ORTHO05D006666 4.4e-36 154.8 136 65.4
CANSAT11G2604 Cannabis sativa HOM05D005499 ORTHO05D006666 5.8e-36 154.5 112 73.2
Gohir.D10G084868 Gossypium hirsutum HOM05D005499 ORTHO05D006666 5.8e-36 154.5 113 72.6
Thecc.04G028500 Theobroma cacao HOM05D005499 ORTHO05D006666 5.8e-36 154.5 113 72.6
Duzib264G0656 Durio zibethinus HOM05D005499 ORTHO05D006666 7.6e-36 154.1 126 67.5
Hma1.2p1_0279F.1_g112320 Hydrangea macrophylla HOM05D005499 ORTHO05D006666 7.6e-36 154.1 128 68.0
Lalb_Chr02g0157891 Lupinus albus HOM05D005499 ORTHO05D006666 7.6e-36 154.1 97 79.4
ECA238G0236 Erigeron canadensis HOM05D005499 ORTHO05D006666 9.9e-36 153.7 116 69.0
Gorai.012G089400 Gossypium raimondii HOM05D005499 ORTHO05D006666 9.9e-36 153.7 113 72.6
RcHm_v2.0_Chr3g0449841 Rosa chinensis HOM05D005499 ORTHO05D006666 9.9e-36 153.7 126 65.9
CSS0020557 Camellia sinensis var. sinensis HOM05D005499 ORTHO05D006666 1.3e-35 153.3 118 71.2
Gorai.011G092800 Gossypium raimondii HOM05D005499 ORTHO05D006666 1.3e-35 153.3 113 71.7
MSTRG.3267 Avicennia marina HOM05D005499 ORTHO05D006666 2.2e-35 152.5 124 70.2
Lsat_1_v5_gn_3_10761 Lactuca sativa HOM05D005499 ORTHO05D006666 2.2e-35 152.5 112 70.5
TWI36G0940 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 2.2e-35 152.5 125 68.8
FvH4_4g13440 Fragaria vesca HOM05D005499 ORTHO05D006666 2.9e-35 152.1 115 71.3
FAN12G0501 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.9e-35 152.1 115 71.3
TAR371G0544 Trochodendron aralioides HOM05D005499 ORTHO05D006666 2.9e-35 152.1 116 69.0
Ciclev10017154m.g Citrus clementina HOM05D005499 ORTHO05D006666 3.8e-35 151.8 118 68.6
FAN14G1883 Fragaria x ananassa HOM05D005499 ORTHO05D006666 3.8e-35 151.8 97 78.4
TWI56G1275 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 6.4e-35 151.0 114 71.9
Cpa.g.sc130.24 Carica papaya HOM05D005499 ORTHO05D006666 8.4e-35 150.6 116 71.6
Oeu003270.1 Olea europaea HOM05D005499 ORTHO05D006666 8.4e-35 150.6 98 79.6
arahy.Tifrunner.gnm1.ann1.C4BPDT Arachis hypogaea HOM05D005499 ORTHO05D006666 1.1e-34 150.2 128 64.8
PSO478G5160 Papaver somniferum HOM05D005499 ORTHO05D006666 1.1e-34 150.2 111 72.1
Nitab4.5_0000743g0030 Nicotiana tabacum HOM05D005499 ORTHO05D006666 1.4e-34 149.8 135 59.3
PSO782G3924 Papaver somniferum HOM05D005499 ORTHO05D006666 1.4e-34 149.8 117 68.4
Rhsim10G0010400 Rhododendron simsii HOM05D005499 ORTHO05D006666 1.4e-34 149.8 118 70.3
arahy.Tifrunner.gnm1.ann1.JB8R4I Arachis hypogaea HOM05D005499 ORTHO05D006666 1.9e-34 149.4 128 64.8
Eucgr.J02294 Eucalyptus grandis HOM05D005499 ORTHO05D006666 1.9e-34 149.4 118 68.6
FAN14G2627 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.9e-34 149.4 97 77.3
MBI11_g21381_MAGBIO Magnolia biondii HOM05D005499 ORTHO05D006666 1.9e-34 149.4 129 64.3
Nitab4.5_0012484g0010 Nicotiana tabacum HOM05D005499 ORTHO05D006666 1.9e-34 149.4 122 63.9
Gohir.D04G079400 Gossypium hirsutum HOM05D005499 ORTHO05D006666 2.4e-34 149.1 113 70.8
unitig_32.g10669 Utricularia gibba HOM05D005499 ORTHO05D006666 2.4e-34 149.1 131 60.3
ClCG04G001400 Citrullus lanatus HOM05D005499 ORTHO05D006666 3.2e-34 148.7 118 69.5
MELO3C008981.2 Cucumis melo HOM05D005499 ORTHO05D006666 3.2e-34 148.7 116 69.0
Solyc11g010180.2 Solanum lycopersicum HOM05D005499 ORTHO05D006666 3.2e-34 148.7 135 59.3
Sopen11g004960 Solanum pennellii HOM05D005499 ORTHO05D006666 3.2e-34 148.7 135 59.3
Aqoxy3G01444 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 5.4e-34 147.9 114 70.2
Lj6g0007933 Lotus japonicus HOM05D005499 ORTHO05D006666 5.4e-34 147.9 124 67.7
Sc10g0004570 Simmondsia chinensis HOM05D005499 ORTHO05D006666 5.4e-34 147.9 114 69.3
Ca_25364_v3 Cicer arietinum L. HOM05D005499 ORTHO05D006666 9.3e-34 147.1 98 77.6
Psat1g031800 Pisum sativum HOM05D005499 ORTHO05D006666 9.3e-34 147.1 98 76.5
CsaV3_4G031040 Cucumis sativus L. HOM05D005499 ORTHO05D006666 1.2e-33 146.7 118 66.9
HanXRQChr01g0030421 Helianthus annuus HOM05D005499 ORTHO05D006666 1.2e-33 146.7 118 66.9
VMungo0464G1619 Vigna mungo HOM05D005499 ORTHO05D006666 1.2e-33 146.7 119 68.1
Atru.chr6.2492 Acer truncatum HOM05D005499 ORTHO05D006666 1.6e-33 146.4 113 68.1
QL02p072772 Quercus lobata HOM05D005499 ORTHO05D006666 1.6e-33 146.4 97 77.3
SGA_v2.0_scaffold47G17558 Striga asiatica HOM05D005499 ORTHO05D006666 1.6e-33 146.4 134 63.4
Actinidia05936 Actinidia chinensis HOM05D005499 ORTHO05D006666 2.7e-33 145.6 98 78.6
TPR.G3708 Trifolium pratense HOM05D005499 ORTHO05D006666 3.5e-33 145.2 98 76.5
Peaxi162Scf00016g00048 Petunia axillaris HOM05D005499 ORTHO05D006666 4.6e-33 144.8 130 60.0
AUR62036750 Chenopodium quinoa HOM05D005499 ORTHO05D006666 6.0e-33 144.4 114 67.5
Phvul.003G262000 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 6.0e-33 144.4 98 75.5
PGSC0003DMG400016154 Solanum tuberosum HOM05D005499 ORTHO05D006666 6.0e-33 144.4 135 57.8
Sed0019428 Sechium edule HOM05D005499 ORTHO05D006666 7.9e-33 144.1 112 69.6
Haze_14820 Corylus avellana HOM05D005499 ORTHO05D006666 1.0e-32 143.7 98 74.5
Glyma.19G077100 Glycine max HOM05D005499 ORTHO05D006666 1.0e-32 143.7 98 77.6
THA.LOC104822403 Tarenaya hassleriana HOM05D005499 ORTHO05D006666 1.0e-32 143.7 127 66.9
TAR629G1334 Trochodendron aralioides HOM05D005499 ORTHO05D006666 1.0e-32 143.7 116 68.1
Gohir.A05G341200 Gossypium hirsutum HOM05D005499 ORTHO05D006666 1.3e-32 143.3 97 76.3
Ah.00g000560 Amaranthus hybridus HOM05D005499 ORTHO05D006666 3.0e-32 142.1 128 61.7
Cfa007270 Carpinus fangiana HOM05D005499 ORTHO05D006666 3.0e-32 142.1 98 73.5
AUR62013851 Chenopodium quinoa HOM05D005499 ORTHO05D006666 3.0e-32 142.1 114 67.5
Medtr6g078300 Medicago truncatula HOM05D005499 ORTHO05D006666 3.0e-32 142.1 97 73.2
Phvul.003G138900 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 3.0e-32 142.1 98 77.6
Phvul.003G139152 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 3.0e-32 142.1 98 77.6
AL3G10400 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 3.9e-32 141.7 112 67.9
Carub.0003s0032 Capsella rubella HOM05D005499 ORTHO05D006666 5.1e-32 141.4 111 69.4
A03p32370 Brassica napus HOM05D005499 ORTHO05D006666 6.6e-32 141.0 111 66.7
C03p39430 Brassica napus HOM05D005499 ORTHO05D006666 6.6e-32 141.0 111 66.7
BolC3t16211H Brassica oleracea HOM05D005499 ORTHO05D006666 6.6e-32 141.0 111 66.7
BraA03t12407Z Brassica rapa HOM05D005499 ORTHO05D006666 6.6e-32 141.0 111 66.7
CARHR075180 Cardamine hirsuta HOM05D005499 ORTHO05D006666 6.6e-32 141.0 111 73.0
Aqoxy5G03538 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 8.7e-32 140.6 112 67.0
Prupe.6G125800 Prunus persica HOM05D005499 ORTHO05D006666 8.7e-32 140.6 124 62.1
Hund13392 Selenicereus undatus HOM05D005499 ORTHO05D006666 8.7e-32 140.6 98 74.5
Glyma.05G073700 Glycine max HOM05D005499 ORTHO05D006666 1.1e-31 140.2 98 76.5
Manes.15G156800 Manihot esculenta HOM05D005499 ORTHO05D006666 1.1e-31 140.2 107 69.2
QL05p048106 Quercus lobata HOM05D005499 ORTHO05D006666 1.9e-31 139.4 97 73.2
Cc07_g00480 Coffea canephora HOM05D005499 ORTHO05D006666 2.5e-31 139.0 117 68.4
Potri.001G335600 Populus trichocarpa HOM05D005499 ORTHO05D006666 3.3e-31 138.7 98 73.5
HPP92_006243 Vanilla planifolia HOM05D005499 ORTHO05D006666 3.3e-31 138.7 127 63.8
Sabra16G0216600 Salix brachista HOM05D005499 ORTHO05D006666 5.6e-31 137.9 98 73.5
AT3G01740 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 7.4e-31 137.5 111 69.4
Os12g0244200 Oryza sativa ssp. japonica HOM05D005499 ORTHO05D006666 1.6e-30 136.3 115 65.2
Zm00001eb328460 Zea mays HOM05D005499 ORTHO05D006666 1.6e-30 136.3 95 72.6
Thhalv10014999m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 4.8e-30 134.8 112 63.4
PGSC0003DMG400023637 Solanum tuberosum HOM05D005499 ORTHO05D006666 8.1e-30 134.0 131 56.5
Sp3g00320 Schrenkiella parvula HOM05D005499 ORTHO05D006666 1.4e-29 133.3 111 68.5
CARHR199040 Cardamine hirsuta HOM05D005499 ORTHO05D006666 2.4e-29 132.5 112 67.0
Aa31LG5G10870 Aethionema arabicum HOM05D005499 ORTHO05D006666 3.1e-29 132.1 112 62.5
Sed0018883 Sechium edule HOM05D005499 ORTHO05D006666 6.9e-29 131.0 92 71.7
EL10Ac2g02820 Beta vulgaris HOM05D005499 ORTHO05D006666 9.0e-29 130.6 98 70.4
CAN.G905.22 Capsicum annuum HOM05D005499 ORTHO05D006666 1.5e-28 129.8 140 52.9
CARHR105740 Cardamine hirsuta HOM05D005499 ORTHO05D006666 2.0e-28 129.4 112 66.1
Nitab4.5_0003764g0020 Nicotiana tabacum HOM05D005499 ORTHO05D006666 2.6e-28 129.0 140 51.4
Medtr4g073700 Medicago truncatula HOM05D005499 ORTHO05D006666 3.4e-28 128.6 98 69.4
Thhalv10021760m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 7.6e-28 127.5 91 67.0
SEGI_30393 Sequoiadendron giganteum HOM05D005499 ORTHO05D006666 9.9e-28 127.1 88 70.5
AL6G24990 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 1.3e-27 126.7 97 67.0
PSO782G2325 Papaver somniferum HOM05D005499 ORTHO05D006666 1.1e-26 123.6 104 65.4
Psat7g172960 Pisum sativum HOM05D005499 ORTHO05D006666 1.1e-26 123.6 113 61.1
AT5G14290 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 7.1e-26 120.9 112 57.1
SHI11403 Sapria himalayana HOM05D005499 ORTHO05D006666 1.2e-25 120.2 109 57.8
FAN21G0236 Fragaria x ananassa HOM05D005499 ORTHO05D006666 4.6e-25 118.2 119 55.5
Nn1g08773 Nelumbo nucifera HOM05D005499 ORTHO05D006666 1.1e-21 107.1 102 60.8
Pp3c26_11040 Physcomitrium patens HOM05D005499 ORTHO05D006666 2.4e-21 105.9 89 58.4
AagrBONN_evm.TU.Sc2ySwM_362.2497 Anthoceros agrestis HOM05D005499 ORTHO05D006666 1.0e-19 100.5 88 54.5
Mapoly0005s0032 Marchantia polymorpha HOM05D005499 ORTHO05D006666 1.0e-19 100.5 116 46.6
Gohir.1Z049635 Gossypium hirsutum HOM05D005499 ORTHO05D006666 6.5e-19 97.8 72 70.8
SMO164G0004 Selaginella moellendorffii HOM05D005499 ORTHO05D006666 6.5e-19 97.8 91 54.9
CBR_g38683 Chara braunii HOM05D005499 ORTHO05D006666 1.4e-18 96.7 116 47.4
FAN02G3728 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.2e-17 93.6 57 77.2
CARHR266370 Cardamine hirsuta HOM05D005499 ORTHO05D006666 4.1e-13 78.6 52 71.2
TAR374G0914 Trochodendron aralioides HOM05D005499 ORTHO05D006666 3.2e-10 68.9 88 47.7
Cre12.g546000 Chlamydomonas reinhardtii HOM05D005499 ORTHO05D006666 7.9e-09 64.3 96 40.6
MCO16G647 Micromonas commoda HOM05D005499 ORTHO05D006666 4.3e-07 58.5 120 32.5
PRCOL_00001894 Prasinoderma coloniale HOM05D005499 ORTHO05D006666 4.3e-07 58.5 95 33.7


User provided reference genes

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