Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 9.1e-85 317.0 177 100.0
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 1.4e-37 160.2 174 55.7
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 2.3e-35 152.9 176 56.2
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 3.3e-34 149.1 174 55.2
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 1.6e-33 146.7 173 55.5
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 3.6e-33 145.6 173 51.4
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 1.8e-32 143.3 161 58.4
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 1.5e-31 140.2 174 56.9
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 2.6e-31 139.4 117 75.2
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 3.4e-31 139.0 174 52.3
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 4.5e-31 138.7 173 54.3
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 4.5e-31 138.7 174 52.3
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 4.5e-31 138.7 174 51.7
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 8.4e-30 134.4 117 72.6
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 8.4e-30 134.4 117 71.8
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 1.9e-29 133.3 119 71.4
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 4.2e-29 132.1 174 51.7
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 5.4e-29 131.7 117 71.8
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 1.2e-28 130.6 176 54.5
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 1.2e-28 130.6 149 60.4
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 2.7e-28 129.4 117 70.9
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 3.5e-28 129.0 118 69.5
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 1.0e-27 127.5 122 61.5
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 1.8e-27 126.7 123 65.0
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 2.3e-27 126.3 118 69.5
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 3.0e-27 125.9 168 52.4
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 3.9e-27 125.6 118 67.8
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 6.7e-27 124.8 173 52.6
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 6.7e-27 124.8 110 74.5
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 1.1e-26 124.0 116 69.8
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 1.9e-26 123.2 173 48.0
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 3.3e-26 122.5 184 51.1
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 3.3e-26 122.5 117 67.5
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 3.3e-26 122.5 178 51.7
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 4.3e-26 122.1 98 78.6
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 5.6e-26 121.7 172 51.7
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 5.6e-26 121.7 118 66.9
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 7.4e-26 121.3 118 66.9
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 1.3e-25 120.6 141 53.2
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 1.6e-25 120.2 118 66.9
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 2.1e-25 119.8 123 63.4
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 2.8e-25 119.4 123 65.9
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 2.8e-25 119.4 117 68.4
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 2.8e-25 119.4 98 75.5
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 4.8e-25 118.6 123 63.4
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 6.2e-25 118.2 118 65.3
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 8.1e-25 117.9 123 64.2
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 1.1e-24 117.5 123 63.4
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 1.1e-24 117.5 123 63.4
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 1.1e-24 117.5 173 51.4
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 1.4e-24 117.1 174 51.1
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 1.8e-24 116.7 116 60.3
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 1.8e-24 116.7 117 67.5
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 2.4e-24 116.3 125 64.8
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 2.4e-24 116.3 117 67.5
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 3.1e-24 115.9 92 81.5
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 3.1e-24 115.9 114 68.4
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 3.1e-24 115.9 114 68.4
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 3.1e-24 115.9 174 51.1
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 3.1e-24 115.9 177 50.3
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 4.0e-24 115.5 117 65.8
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 5.3e-24 115.2 117 65.0
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 5.3e-24 115.2 114 68.4
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 5.3e-24 115.2 118 63.6
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 6.9e-24 114.8 90 82.2
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 9.0e-24 114.4 114 67.5
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 1.2e-23 114.0 116 64.7
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 1.2e-23 114.0 118 64.4
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 1.5e-23 113.6 123 61.8
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 2.0e-23 113.2 167 49.7
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 2.6e-23 112.8 119 66.4
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 3.4e-23 112.5 119 66.4
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 5.8e-23 111.7 96 80.2
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 5.8e-23 111.7 98 75.5
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 7.6e-23 111.3 173 50.3
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 1.0e-22 110.9 98 74.5
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 3.8e-22 109.0 117 65.8
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 4.9e-22 108.6 175 50.3
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 8.4e-22 107.8 120 60.8
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 1.1e-21 107.5 147 55.1
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 1.4e-21 107.1 147 55.1
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 1.9e-21 106.7 117 65.8
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 2.5e-21 106.3 117 65.0
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 2.5e-21 106.3 117 65.0
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 2.5e-21 106.3 117 65.0
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 2.5e-21 106.3 173 48.6
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 7.1e-21 104.8 82 81.7
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 9.3e-21 104.4 114 64.9
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 2.1e-20 103.2 123 54.5
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 2.7e-20 102.8 80 83.8
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 4.6e-20 102.1 128 48.4
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 7.9e-20 101.3 113 60.2
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 3.0e-19 99.4 91 78.0
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 5.1e-19 98.6 170 45.3
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 2.5e-18 96.3 131 49.6
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 3.3e-18 95.9 85 76.5
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 3.3e-18 95.9 78 78.2
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 9.6e-18 94.4 116 55.2
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 2.1e-17 93.2 109 64.2
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 6.2e-17 91.7 136 49.3
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 6.5e-14 81.6 86 68.6
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 2.5e-13 79.7 104 57.7
COL.COLO4_11248 Corchorus olitorius HOM05D007523 ORTHO05D009520 6.1e-12 75.1 92 64.1
AUR62044264 Chenopodium quinoa HOM05D007523 ORTHO05D009520 2.2e-06 56.6 72 75.0


User provided reference genes

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