Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1098G093 Amborella trichopoda HOM05D007598 ORTHO05D009632 2.6e-33 144.8 74 100.0
Sabra11G0066800 Salix brachista HOM05D007598 ORTHO05D009632 6.9e-18 93.6 68 66.2
Potri.011G084300 Populus trichocarpa HOM05D007598 ORTHO05D009632 3.4e-17 91.3 58 74.1
TAR626G0451 Trochodendron aralioides HOM05D007598 ORTHO05D009632 4.5e-17 90.9 58 75.9
MBI02_g15148_MAGBIO Magnolia biondii HOM05D007598 ORTHO05D009632 5.8e-17 90.5 62 72.6
EL10Ac8g19673 Beta vulgaris HOM05D007598 ORTHO05D009632 8.4e-16 86.7 66 62.1
CiPaw.10G091200 Carya illinoinensis HOM05D007598 ORTHO05D009632 8.4e-16 86.7 75 60.0
DCAR_027909 Daucus carota HOM05D007598 ORTHO05D009632 1.1e-15 86.3 76 60.5
Gohir.D10G042400 Gossypium hirsutum HOM05D007598 ORTHO05D009632 1.1e-15 86.3 56 76.8
Nitab4.5_0006887g0010 Nicotiana tabacum HOM05D007598 ORTHO05D009632 1.1e-15 86.3 73 57.5
Nitab4.5_0000420g0040 Nicotiana tabacum HOM05D007598 ORTHO05D009632 1.4e-15 85.9 74 56.8
Atru.chr10.1775 Acer truncatum HOM05D007598 ORTHO05D009632 1.9e-15 85.5 72 65.3
AUR62030196 Chenopodium quinoa HOM05D007598 ORTHO05D009632 1.9e-15 85.5 73 56.2
Cpa.g.sc170.27 Carica papaya HOM05D007598 ORTHO05D009632 2.4e-15 85.1 72 62.5
AUR62002748 Chenopodium quinoa HOM05D007598 ORTHO05D009632 3.2e-15 84.7 75 58.7
Glyma.13G218700 Glycine max HOM05D007598 ORTHO05D009632 3.2e-15 84.7 56 71.4
Dinv32243 Davidia involucrata HOM05D007598 ORTHO05D009632 4.2e-15 84.3 75 58.7
Sp4g16850 Schrenkiella parvula HOM05D007598 ORTHO05D009632 4.2e-15 84.3 53 75.5
CARHR128680 Cardamine hirsuta HOM05D007598 ORTHO05D009632 5.4e-15 84.0 75 61.3
Thhalv10017600m.g Eutrema salsugineum HOM05D007598 ORTHO05D009632 5.4e-15 84.0 53 73.6
Manes.17G070801 Manihot esculenta HOM05D007598 ORTHO05D009632 5.4e-15 84.0 87 56.3
Thecc.06G149600 Theobroma cacao HOM05D007598 ORTHO05D009632 1.2e-14 82.8 59 69.5
Aqoxy7G00246 Aquilegia oxysepala HOM05D007598 ORTHO05D009632 1.6e-14 82.4 67 62.7
AL4G30560 Arabidopsis lyrata HOM05D007598 ORTHO05D009632 1.6e-14 82.4 53 73.6
A04p26490 Brassica napus HOM05D007598 ORTHO05D009632 1.6e-14 82.4 71 57.7
C04p63910 Brassica napus HOM05D007598 ORTHO05D009632 1.6e-14 82.4 71 57.7
BolC4t27858H Brassica oleracea HOM05D007598 ORTHO05D009632 1.6e-14 82.4 71 57.7
BraA04t18153Z Brassica rapa HOM05D007598 ORTHO05D009632 1.6e-14 82.4 71 57.7
CSS0006536 Camellia sinensis var. sinensis HOM05D007598 ORTHO05D009632 1.6e-14 82.4 71 59.2
Lj6g0001552 Lotus japonicus HOM05D007598 ORTHO05D009632 1.6e-14 82.4 67 58.2
Migut.M01992 Erythranthe guttata HOM05D007598 ORTHO05D009632 2.1e-14 82.0 59 67.8
HanXRQChr15g0480881 Helianthus annuus HOM05D007598 ORTHO05D009632 2.1e-14 82.0 77 55.8
Ah.14g086510 Amaranthus hybridus HOM05D007598 ORTHO05D009632 2.7e-14 81.6 72 56.9
CSS0035986 Camellia sinensis var. sinensis HOM05D007598 ORTHO05D009632 2.7e-14 81.6 67 61.2
FAN25G0892 Fragaria x ananassa HOM05D007598 ORTHO05D009632 2.7e-14 81.6 56 71.4
Actinidia07703 Actinidia chinensis HOM05D007598 ORTHO05D009632 3.5e-14 81.3 68 60.3
BcaB06g28784 Brassica carinata HOM05D007598 ORTHO05D009632 3.5e-14 81.3 51 74.5
MD05G1283100 Malus domestica HOM05D007598 ORTHO05D009632 3.5e-14 81.3 78 57.7
MD10G1261400 Malus domestica HOM05D007598 ORTHO05D009632 3.5e-14 81.3 62 62.9
PGR042G1521 Punica granatum HOM05D007598 ORTHO05D009632 3.5e-14 81.3 69 59.4
QL05p057697 Quercus lobata HOM05D007598 ORTHO05D009632 3.5e-14 81.3 48 81.2
arahy.Tifrunner.gnm1.ann1.A3G0A3 Arachis hypogaea HOM05D007598 ORTHO05D009632 4.6e-14 80.9 74 56.8
Duzib235G0096 Durio zibethinus HOM05D007598 ORTHO05D009632 4.6e-14 80.9 62 67.7
Migut.M00903 Erythranthe guttata HOM05D007598 ORTHO05D009632 4.6e-14 80.9 59 66.1
AT2G34585 Arabidopsis thaliana HOM05D007598 ORTHO05D009632 6.0e-14 80.5 71 60.6
Psat1g188680 Pisum sativum HOM05D007598 ORTHO05D009632 6.0e-14 80.5 68 61.8
Actinidia39580 Actinidia chinensis HOM05D007598 ORTHO05D009632 7.9e-14 80.1 67 61.2
Cc00_g10360 Coffea canephora HOM05D007598 ORTHO05D009632 7.9e-14 80.1 71 60.6
Carub.0004s1626 Capsella rubella HOM05D007598 ORTHO05D009632 1.0e-13 79.7 50 76.0
ClCG01G024670 Citrullus lanatus HOM05D007598 ORTHO05D009632 1.0e-13 79.7 66 62.1
MELO3C007128.2 Cucumis melo HOM05D007598 ORTHO05D009632 1.0e-13 79.7 76 56.6
PGSC0003DMG400021093 Solanum tuberosum HOM05D007598 ORTHO05D009632 1.0e-13 79.7 75 58.7
FvH4_3g05470 Fragaria vesca HOM05D007598 ORTHO05D009632 1.3e-13 79.3 56 69.6
HanXRQChr04g0114301 Helianthus annuus HOM05D007598 ORTHO05D009632 1.3e-13 79.3 68 57.4
Phvul.006G165400 Phaseolus vulgaris HOM05D007598 ORTHO05D009632 1.3e-13 79.3 61 65.6
Sed0007826 Sechium edule HOM05D007598 ORTHO05D009632 1.3e-13 79.3 74 56.8
arahy.Tifrunner.gnm1.ann1.KTXA2U Arachis hypogaea HOM05D007598 ORTHO05D009632 1.8e-13 79.0 74 55.4
CAN.G702.32 Capsicum annuum HOM05D007598 ORTHO05D009632 1.8e-13 79.0 64 62.5
Ca_00537_v3 Cicer arietinum L. HOM05D007598 ORTHO05D009632 1.8e-13 79.0 56 62.5
Ciclev10017916m.g Citrus clementina HOM05D007598 ORTHO05D009632 1.8e-13 79.0 79 55.7
CsaV3_6G051780 Cucumis sativus L. HOM05D007598 ORTHO05D009632 2.3e-13 78.6 66 62.1
FAN21G2813 Fragaria x ananassa HOM05D007598 ORTHO05D009632 2.3e-13 78.6 56 69.6
Lsat_1_v5_gn_7_28481 Lactuca sativa HOM05D007598 ORTHO05D009632 2.3e-13 78.6 56 62.5
Cfa000936 Carpinus fangiana HOM05D007598 ORTHO05D009632 3.0e-13 78.2 66 59.1
Nn3g20182 Nelumbo nucifera HOM05D007598 ORTHO05D009632 3.0e-13 78.2 60 66.7
FAN11G3574 Fragaria x ananassa HOM05D007598 ORTHO05D009632 3.9e-13 77.8 71 59.2
Aa31LG10G6810 Aethionema arabicum HOM05D007598 ORTHO05D009632 5.1e-13 77.4 74 56.8
FAN16G2639 Fragaria x ananassa HOM05D007598 ORTHO05D009632 5.1e-13 77.4 77 55.8
Prupe.4G081500 Prunus persica HOM05D007598 ORTHO05D009632 5.1e-13 77.4 66 59.1
CANSAT35G0825 Cannabis sativa HOM05D007598 ORTHO05D009632 6.7e-13 77.0 50 70.0
SalBow8G5536 Salvia bowleyana HOM05D007598 ORTHO05D009632 6.7e-13 77.0 61 62.3
Lalb_Chr20g0117881 Lupinus albus HOM05D007598 ORTHO05D009632 8.7e-13 76.6 72 52.8
Solyc02g070470.1 Solanum lycopersicum HOM05D007598 ORTHO05D009632 8.7e-13 76.6 74 52.7
Sopen02g019560 Solanum pennellii HOM05D007598 ORTHO05D009632 8.7e-13 76.6 76 56.6
THA.LOC104820651 Tarenaya hassleriana HOM05D007598 ORTHO05D009632 1.5e-12 75.9 72 56.9
HPP92_000988 Vanilla planifolia HOM05D007598 ORTHO05D009632 1.5e-12 75.9 58 62.1
COL.COLO4_31062 Corchorus olitorius HOM05D007598 ORTHO05D009632 3.3e-12 74.7 46 76.1
Medtr2g019240 Medicago truncatula HOM05D007598 ORTHO05D009632 3.3e-12 74.7 60 58.3
TWI53G0871 Tripterygium wilfordii HOM05D007598 ORTHO05D009632 3.3e-12 74.7 68 54.4
RcHm_v2.0_Chr5g0014281 Rosa chinensis HOM05D007598 ORTHO05D009632 4.3e-12 74.3 80 52.5
PSO541G2526 Papaver somniferum HOM05D007598 ORTHO05D009632 7.4e-12 73.6 87 49.4
Rhsim02G0159000 Rhododendron simsii HOM05D007598 ORTHO05D009632 7.4e-12 73.6 61 55.7
unitig_749.g13736 Utricularia gibba HOM05D007598 ORTHO05D009632 7.4e-12 73.6 49 67.3
Glyma.15G093500 Glycine max HOM05D007598 ORTHO05D009632 1.3e-11 72.8 59 59.3
Nitab4.5_0002744g0030 Nicotiana tabacum HOM05D007598 ORTHO05D009632 1.6e-11 72.4 75 53.3
Sc05g0006160 Simmondsia chinensis HOM05D007598 ORTHO05D009632 2.1e-11 72.0 56 57.1
SEGI_36626 Sequoiadendron giganteum HOM05D007598 ORTHO05D009632 1.4e-10 69.3 49 63.3
Rhsim13G0114100 Rhododendron simsii HOM05D007598 ORTHO05D009632 1.8e-10 68.9 67 50.7
ECA236G0778 Erigeron canadensis HOM05D007598 ORTHO05D009632 4.0e-10 67.8 46 63.0
PGSC0003DMG400012092 Solanum tuberosum HOM05D007598 ORTHO05D009632 4.0e-10 67.8 50 62.0
Os07g0154300 Oryza sativa ssp. japonica HOM05D007598 ORTHO05D009632 9.0e-10 66.6 48 58.3
Zm00001eb117510 Zea mays HOM05D007598 ORTHO05D009632 2.0e-09 65.5 47 61.7
Pp3c14_11250 Physcomitrium patens HOM05D007598 ORTHO05D009632 3.8e-08 61.2 71 40.8
SEGI_00564 Sequoiadendron giganteum HOM05D007598 ORTHO05D009632 1.9e-07 58.9 48 54.2
Mapoly0055s0099 Marchantia polymorpha HOM05D007598 ORTHO05D009632 7.1e-07 57.0 48 52.1
Aqoxy6G00608 Aquilegia oxysepala HOM05D007833 ORTHO05D009855 7.9e-06 53.5 48 52.1


User provided reference genes

Program Settings