Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1098G050 Amborella trichopoda HOM05D005657 ORTHO05D007104 6.9e-195 683.7 328 100.0
TAR626G1592 Trochodendron aralioides HOM05D005657 ORTHO05D007104 5.8e-101 371.7 336 58.9
Nn4g26588 Nelumbo nucifera HOM05D005657 ORTHO05D007104 1.6e-98 363.6 332 55.7
Aqoxy1G01688 Aquilegia oxysepala HOM05D005657 ORTHO05D007104 1.3e-97 360.5 341 54.8
Gohir.D05G150300 Gossypium hirsutum HOM05D005657 ORTHO05D007104 7.3e-96 354.8 330 55.5
Gohir.A05G147800 Gossypium hirsutum HOM05D005657 ORTHO05D007104 4.8e-95 352.1 330 54.8
Gorai.009G154400 Gossypium raimondii HOM05D005657 ORTHO05D007104 4.8e-95 352.1 330 54.8
Cfa000932 Carpinus fangiana HOM05D005657 ORTHO05D007104 1.4e-94 350.5 336 55.7
CiPaw.09G122400 Carya illinoinensis HOM05D005657 ORTHO05D007104 4.0e-94 349.0 332 54.5
MBI18_g24473_MAGBIO Magnolia biondii HOM05D005657 ORTHO05D007104 9.0e-94 347.8 332 56.0
Manes.17G071500 Manihot esculenta HOM05D005657 ORTHO05D007104 3.4e-93 345.9 334 55.1
GSVIVG01021513001 Vitis vinifera HOM05D005657 ORTHO05D007104 7.6e-93 344.7 330 53.0
Eucgr.E01441 Eucalyptus grandis HOM05D005657 ORTHO05D007104 9.9e-93 344.4 333 55.0
CANSAT35G1510 Cannabis sativa HOM05D005657 ORTHO05D007104 1.7e-92 343.6 333 54.1
SEGI_34988 Sequoiadendron giganteum HOM05D005657 ORTHO05D007104 2.9e-92 342.8 338 53.3
ClCG01G024690 Citrullus lanatus HOM05D005657 ORTHO05D007104 4.9e-92 342.0 332 54.2
Lj6g0016438 Lotus japonicus HOM05D005657 ORTHO05D007104 4.9e-92 342.0 330 53.9
CAN.G1744.1 Capsicum annuum HOM05D005657 ORTHO05D007104 8.4e-92 341.3 335 53.1
Actinidia39582 Actinidia chinensis HOM05D005657 ORTHO05D007104 1.4e-91 340.5 332 53.9
Medtr2g019220 Medicago truncatula HOM05D005657 ORTHO05D007104 1.4e-91 340.5 328 53.7
arahy.Tifrunner.gnm1.ann1.PL5EIV Arachis hypogaea HOM05D005657 ORTHO05D007104 1.9e-91 340.1 328 55.2
arahy.Tifrunner.gnm1.ann1.1GZ3A6 Arachis hypogaea HOM05D005657 ORTHO05D007104 2.4e-91 339.7 328 54.9
Thecc.06G148800 Theobroma cacao HOM05D005657 ORTHO05D007104 3.2e-91 339.3 332 53.3
Glyma.13G219000 Glycine max HOM05D005657 ORTHO05D007104 5.4e-91 338.6 332 54.5
VMungo0540G0312 Vigna mungo HOM05D005657 ORTHO05D007104 7.1e-91 338.2 330 55.5
FAN21G3134 Fragaria x ananassa HOM05D005657 ORTHO05D007104 1.2e-90 337.4 332 55.1
Hma1.2p1_0020F.1_g014110 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 2.1e-90 336.7 328 54.6
Lalb_Chr18g0055371 Lupinus albus HOM05D005657 ORTHO05D007104 2.1e-90 336.7 332 53.0
MD05G1282500 Malus domestica HOM05D005657 ORTHO05D007104 4.6e-90 335.5 329 54.1
Potri.011G084000 Populus trichocarpa HOM05D005657 ORTHO05D007104 4.6e-90 335.5 327 52.9
FvH4_3g05380 Fragaria vesca HOM05D005657 ORTHO05D007104 1.3e-89 334.0 332 54.8
Oeu042460.1 Olea europaea HOM05D005657 ORTHO05D007104 1.3e-89 334.0 333 54.7
Sopen05g032420 Solanum pennellii HOM05D005657 ORTHO05D007104 1.7e-89 333.6 332 53.3
PGSC0003DMG401013075 Solanum tuberosum HOM05D005657 ORTHO05D007104 1.7e-89 333.6 335 53.1
Sabra11G0066600 Salix brachista HOM05D005657 ORTHO05D007104 2.3e-89 333.2 327 52.3
FAN16G0196 Fragaria x ananassa HOM05D005657 ORTHO05D007104 3.0e-89 332.8 332 54.5
Ciclev10015992m.g Citrus clementina HOM05D005657 ORTHO05D007104 3.9e-89 332.4 289 58.1
Haze_05617 Corylus avellana HOM05D005657 ORTHO05D007104 3.9e-89 332.4 371 50.1
CsaV3_6G051800 Cucumis sativus L. HOM05D005657 ORTHO05D007104 5.1e-89 332.0 332 52.4
Duzib192G0691 Durio zibethinus HOM05D005657 ORTHO05D007104 5.1e-89 332.0 348 52.3
Solyc05g053950.4 Solanum lycopersicum HOM05D005657 ORTHO05D007104 6.6e-89 331.6 334 53.6
Cc07_g20130 Coffea canephora HOM05D005657 ORTHO05D007104 8.7e-89 331.3 330 52.4
PGR031G0971 Punica granatum HOM05D005657 ORTHO05D007104 8.7e-89 331.3 333 52.6
SalBow8G0891 Salvia bowleyana HOM05D005657 ORTHO05D007104 1.1e-88 330.9 326 51.2
Prupe.4G082300 Prunus persica HOM05D005657 ORTHO05D007104 1.9e-88 330.1 333 52.3
RcHm_v2.0_Chr5g0014371 Rosa chinensis HOM05D005657 ORTHO05D007104 2.5e-88 329.7 330 53.0
CARHR029280 Cardamine hirsuta HOM05D005657 ORTHO05D007104 3.3e-88 329.3 333 52.0
Ca_00535_v3 Cicer arietinum L. HOM05D005657 ORTHO05D007104 4.3e-88 328.9 332 53.6
Psat1g188200 Pisum sativum HOM05D005657 ORTHO05D007104 4.3e-88 328.9 330 52.7
TWI53G0207 Tripterygium wilfordii HOM05D005657 ORTHO05D007104 4.3e-88 328.9 329 53.2
Nitab4.5_0000484g0050 Nicotiana tabacum HOM05D005657 ORTHO05D007104 5.6e-88 328.6 334 51.5
Aa31LG6G5550 Aethionema arabicum HOM05D005657 ORTHO05D007104 1.6e-87 327.0 330 53.3
PSO339G2615 Papaver somniferum HOM05D005657 ORTHO05D007104 1.1e-86 324.3 331 51.7
Thhalv10008271m.g Eutrema salsugineum HOM05D005657 ORTHO05D007104 1.4e-86 323.9 331 51.1
QL05p057428 Quercus lobata HOM05D005657 ORTHO05D007104 1.8e-86 323.6 337 52.5
Sed0002032 Sechium edule HOM05D005657 ORTHO05D007104 2.4e-86 323.2 328 51.2
HPP92_012186 Vanilla planifolia HOM05D005657 ORTHO05D007104 3.1e-86 322.8 335 50.4
AT1G30130 Arabidopsis thaliana HOM05D005657 ORTHO05D007104 4.0e-86 322.4 331 51.1
HanXRQChr16g0525711 Helianthus annuus HOM05D005657 ORTHO05D007104 4.0e-86 322.4 326 51.8
PSO384G4094 Papaver somniferum HOM05D005657 ORTHO05D007104 5.3e-86 322.0 328 50.9
Carub.0001s2836 Capsella rubella HOM05D005657 ORTHO05D007104 6.9e-86 321.6 328 51.8
MELO3C007126.2 Cucumis melo HOM05D005657 ORTHO05D007104 6.9e-86 321.6 337 51.0
MSTRG.16252 Avicennia marina HOM05D005657 ORTHO05D007104 9.0e-86 321.2 335 52.2
Sp1g25990 Schrenkiella parvula HOM05D005657 ORTHO05D007104 2.0e-85 320.1 333 50.5
BcaB03g12197 Brassica carinata HOM05D005657 ORTHO05D007104 2.6e-85 319.7 332 51.2
CSS0046586 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 5.8e-85 318.5 330 51.8
A08p24690 Brassica napus HOM05D005657 ORTHO05D007104 7.6e-85 318.2 332 51.8
BcaC01g00157 Brassica carinata HOM05D005657 ORTHO05D007104 9.9e-85 317.8 332 51.2
BolC3t19896H Brassica oleracea HOM05D005657 ORTHO05D007104 1.3e-84 317.4 332 52.1
Sc24g0001740 Simmondsia chinensis HOM05D005657 ORTHO05D007104 1.7e-84 317.0 328 52.1
BraA08t34424Z Brassica rapa HOM05D005657 ORTHO05D007104 4.9e-84 315.5 332 51.5
ECA234G1983 Erigeron canadensis HOM05D005657 ORTHO05D007104 4.9e-84 315.5 326 52.1
C03p76410 Brassica napus HOM05D005657 ORTHO05D007104 8.4e-84 314.7 332 50.3
Ah.09g232540 Amaranthus hybridus HOM05D005657 ORTHO05D007104 1.1e-83 314.3 332 51.5
DCAR_007885 Daucus carota HOM05D005657 ORTHO05D007104 3.2e-83 312.8 328 50.6
EL10Ac8g19662 Beta vulgaris HOM05D005657 ORTHO05D007104 7.1e-83 311.6 332 50.3
Zm00001eb300160 Zea mays HOM05D005657 ORTHO05D007104 7.1e-83 311.6 343 49.0
CSS0036233 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 4.6e-82 308.9 330 50.3
vmacro10957 Vaccinium macrocarpon HOM05D005657 ORTHO05D007104 7.9e-82 308.1 380 45.0
FAN25G2659 Fragaria x ananassa HOM05D005657 ORTHO05D007104 3.0e-81 306.2 288 56.6
TPR.G26242 Trifolium pratense HOM05D005657 ORTHO05D007104 5.1e-81 305.4 286 54.2
Lsat_1_v5_gn_4_29400 Lactuca sativa HOM05D005657 ORTHO05D007104 5.6e-80 302.0 332 49.1
TPR.G26236 Trifolium pratense HOM05D005657 ORTHO05D007104 1.6e-79 300.4 326 48.5
AUR62002729 Chenopodium quinoa HOM05D005657 ORTHO05D007104 3.7e-79 299.3 226 63.3
THA.LOC104812673 Tarenaya hassleriana HOM05D005657 ORTHO05D007104 6.2e-79 298.5 340 47.9
Pp3c19_5890 Physcomitrium patens HOM05D005657 ORTHO05D007104 2.4e-78 296.6 305 50.8
Peaxi162Scf00394g00119 Petunia axillaris HOM05D005657 ORTHO05D007104 3.1e-78 296.2 269 56.5
Mapoly0156s0023 Marchantia polymorpha HOM05D005657 ORTHO05D007104 5.1e-73 278.9 280 52.5
SMO364G0117 Selaginella moellendorffii HOM05D005657 ORTHO05D007104 8.7e-73 278.1 327 50.2
Rhsim02G0159200 Rhododendron simsii HOM05D005657 ORTHO05D007104 1.6e-71 273.9 334 46.4
Nitab4.5_0000717g0030 Nicotiana tabacum HOM05D005657 ORTHO05D007104 8.2e-71 271.6 254 55.9
AagrBONN_evm.TU.Sc2ySwM_117.1613 Anthoceros agrestis HOM05D001134 ORTHO05D001035 9.0e-70 268.1 242 55.0
Phvul.006G165700 Phaseolus vulgaris HOM05D005657 ORTHO05D007104 1.5e-69 267.3 330 46.4
Dinv30768 Davidia involucrata HOM05D005657 ORTHO05D007104 1.1e-67 261.2 253 56.5
Migut.D01761 Erythranthe guttata HOM05D005657 ORTHO05D007104 3.2e-67 259.6 254 55.1
Lj2A319G39 Lonicera japonica HOM05D005657 ORTHO05D007104 7.2e-67 258.5 213 58.7
CDE01G0002 Ceratophyllum demersum HOM05D005657 ORTHO05D007104 1.2e-66 257.7 260 53.5
FAN11G2536 Fragaria x ananassa HOM05D005657 ORTHO05D007104 4.6e-66 255.8 332 45.2
AUR62030180 Chenopodium quinoa HOM05D005657 ORTHO05D007104 6.7e-65 251.9 189 64.0
Atru.chr10.1193 Acer truncatum HOM05D005657 ORTHO05D007104 9.7e-64 248.1 216 57.9
DCAR_027906 Daucus carota HOM05D005657 ORTHO05D007104 1.2e-61 241.1 273 46.2
DCAR_027907 Daucus carota HOM05D005657 ORTHO05D007104 2.0e-61 240.4 273 46.5
Actinidia07705 Actinidia chinensis HOM05D005657 ORTHO05D007104 7.7e-61 238.4 332 43.4
Hund15862 Selenicereus undatus HOM05D005657 ORTHO05D007104 5.0e-60 235.7 330 43.3
DCAR_027905 Daucus carota HOM05D005657 ORTHO05D007104 6.5e-60 235.3 259 48.6
SalBow2G3627 Salvia bowleyana HOM05D005657 ORTHO05D007104 3.3e-56 223.0 336 38.7
BcaB03g12196 Brassica carinata HOM05D005657 ORTHO05D007104 4.8e-55 219.2 164 62.2
Os07g0153300 Oryza sativa ssp. japonica HOM05D005657 ORTHO05D007104 3.4e-53 213.0 169 59.8
Rhsim02G0159300 Rhododendron simsii HOM05D005657 ORTHO05D007104 3.9e-49 199.5 215 47.0
Glyma.15G093200 Glycine max HOM05D005657 ORTHO05D007104 2.4e-46 190.3 186 55.4
Hma1.2p1_0020F.1_g014100 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 1.7e-44 184.1 186 54.8
SGA_v2.0_scaffold333G48980 Striga asiatica HOM05D005657 ORTHO05D007104 1.7e-44 184.1 128 67.2
Cre06.g269300 Chlamydomonas reinhardtii HOM05D005657 ORTHO05D007104 5.3e-38 162.5 227 41.4
CBR_g39195 Chara braunii HOM05D005657 ORTHO05D007104 2.0e-37 160.6 440 29.1
MCO14G385 Micromonas commoda HOM05D005657 ORTHO05D007104 2.0e-37 160.6 291 36.8
Hma1.2p1_0020F.1_g014120 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 2.9e-36 156.8 141 53.9
AUR62002725 Chenopodium quinoa HOM05D005657 ORTHO05D007104 3.2e-35 153.3 230 39.6
SalBow2G2566 Salvia bowleyana HOM05D005657 ORTHO05D007104 8.0e-34 148.7 329 32.2
PGSC0003DMG400002455 Solanum tuberosum HOM05D005657 ORTHO05D007104 1.8e-33 147.5 148 48.6
PRCOL_00005919 Prasinoderma coloniale HOM05D005657 ORTHO05D007104 8.8e-33 145.2 276 37.3
unitig_26.g9756 Utricularia gibba HOM05D005657 ORTHO05D007104 1.3e-28 131.3 159 48.4
TPR.G26247 Trifolium pratense HOM05D005657 ORTHO05D007104 7.5e-24 115.5 112 51.8
SGA_v2.0_scaffold37G14914 Striga asiatica HOM05D005657 ORTHO05D007104 4.3e-19 99.8 61 72.1
SalBow2G0785 Salvia bowleyana HOM05D005657 ORTHO05D007104 5.7e-16 89.4 185 34.6
Glyma.08G293333 Glycine max HOM05D005657 ORTHO05D007104 1.7e-12 77.8 51 68.6
unitig_26.g9757 Utricularia gibba HOM05D005657 ORTHO05D007104 5.0e-12 76.3 67 52.2
Phvul.007G245866 Phaseolus vulgaris HOM05D005657 ORTHO05D007104 5.8e-08 62.8 48 62.5
SGA_v2.0_scaffold119G32786 Striga asiatica HOM05D005657 ORTHO05D007104 1.7e-07 61.2 31 83.9
CSS0012720 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 6.4e-07 59.3 36 69.4
SGA_v2.0_scaffold118G32549 Striga asiatica HOM05D005657 ORTHO05D007104 1.1e-06 58.5 40 67.5
COL.COLO4_31053 Corchorus olitorius HOM05D005657 ORTHO05D007104 2.4e-06 57.4 60 45.0
MCO01G569 Micromonas commoda HOM05D005657 ORTHO05D007104 7.0e-06 55.8 42 59.5


User provided reference genes

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