Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1098G006 Amborella trichopoda HOM05D007799 ORTHO05D009854 6.0e-140 500.7 239 100.0
MBI02_g12199_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 6.0e-63 245.0 236 50.8
MBI18_g11218_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 5.8e-58 228.4 225 48.0
Manes.15G125000 Manihot esculenta HOM05D007799 ORTHO05D009854 1.5e-53 213.8 235 41.3
Medtr2g018670 Medicago truncatula HOM05D007799 ORTHO05D009854 4.3e-53 212.2 239 41.8
Cfa000897 Carpinus fangiana HOM05D007799 ORTHO05D009854 9.5e-53 211.1 233 42.1
Eucgr.D00266 Eucalyptus grandis HOM05D007799 ORTHO05D009854 2.8e-52 209.5 218 45.0
Lj6g0006831 Lotus japonicus HOM05D007799 ORTHO05D009854 6.2e-52 208.4 233 39.1
QL05p055084 Quercus lobata HOM05D007799 ORTHO05D009854 1.1e-51 207.6 222 44.6
Glyma.15G090500 Glycine max HOM05D007799 ORTHO05D009854 2.4e-51 206.5 238 40.3
Duzib192G0648 Durio zibethinus HOM05D007799 ORTHO05D009854 6.8e-51 204.9 226 42.9
Rhsim13G0117700 Rhododendron simsii HOM05D007799 ORTHO05D009854 8.9e-51 204.5 220 43.2
Glyma.13G221700 Glycine max HOM05D007799 ORTHO05D009854 1.2e-50 204.1 224 40.6
Psat1g192080 Pisum sativum HOM05D007799 ORTHO05D009854 4.4e-50 202.2 239 41.0
Thecc.06G144300 Theobroma cacao HOM05D007799 ORTHO05D009854 4.4e-50 202.2 220 42.3
RcHm_v2.0_Chr5g0014941 Rosa chinensis HOM05D007799 ORTHO05D009854 5.8e-50 201.8 219 43.8
COL.COLO4_31009 Corchorus olitorius HOM05D007799 ORTHO05D009854 9.9e-50 201.1 227 42.7
Ca_00511_v3 Cicer arietinum L. HOM05D007799 ORTHO05D009854 1.3e-49 200.7 229 41.5
HPP92_026553 Vanilla planifolia HOM05D007799 ORTHO05D009854 1.3e-49 200.7 221 43.9
CSS0035706 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 1.7e-49 200.3 230 41.3
Oeu032721.1 Olea europaea HOM05D007799 ORTHO05D009854 1.7e-49 200.3 219 42.9
VMungo0540G2150 Vigna mungo HOM05D007799 ORTHO05D009854 1.7e-49 200.3 238 39.1
CiPaw.10G088800 Carya illinoinensis HOM05D007799 ORTHO05D009854 2.9e-49 199.5 236 41.9
CSS0034958 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 6.4e-49 198.4 230 41.3
Duzib235G1165 Durio zibethinus HOM05D007799 ORTHO05D009854 8.4e-49 198.0 227 41.9
Lalb_Chr20g0117681 Lupinus albus HOM05D007799 ORTHO05D009854 8.4e-49 198.0 239 38.9
Prupe.4G085700 Prunus persica HOM05D007799 ORTHO05D009854 8.4e-49 198.0 239 39.7
CiPaw.09G119600 Carya illinoinensis HOM05D007799 ORTHO05D009854 1.9e-48 196.8 224 41.5
MD10G1258100 Malus domestica HOM05D007799 ORTHO05D009854 2.4e-48 196.4 233 40.8
PGR083G2472 Punica granatum HOM05D007799 ORTHO05D009854 2.4e-48 196.4 222 42.3
Glyma.05G143400 Glycine max HOM05D007799 ORTHO05D009854 1.2e-47 194.1 236 36.4
Ciclev10016395m.g Citrus clementina HOM05D007799 ORTHO05D009854 2.7e-47 193.0 215 43.3
Gorai.010G237400 Gossypium raimondii HOM05D007799 ORTHO05D009854 2.7e-47 193.0 223 43.9
Oeu031191.1 Olea europaea HOM05D007799 ORTHO05D009854 3.5e-47 192.6 218 44.0
TPR.G26257 Trifolium pratense HOM05D007799 ORTHO05D009854 3.5e-47 192.6 241 39.0
Potri.011G081701 Populus trichocarpa HOM05D007799 ORTHO05D009854 6.0e-47 191.8 224 41.1
Gohir.A06G196000 Gossypium hirsutum HOM05D007799 ORTHO05D009854 7.8e-47 191.4 223 43.9
Lalb_Chr15g0086631 Lupinus albus HOM05D007799 ORTHO05D009854 1.3e-46 190.7 229 40.2
FAN25G3832 Fragaria x ananassa HOM05D007799 ORTHO05D009854 3.9e-46 189.1 220 42.3
Nitab4.5_0005655g0010 Nicotiana tabacum HOM05D007799 ORTHO05D009854 3.9e-46 189.1 240 39.6
Atru.chr10.1081 Acer truncatum HOM05D007799 ORTHO05D009854 6.6e-46 188.3 215 41.9
FAN21G3556 Fragaria x ananassa HOM05D007799 ORTHO05D009854 1.1e-45 187.6 220 41.4
Peaxi162Scf00045g02414 Petunia axillaris HOM05D007799 ORTHO05D009854 1.1e-45 187.6 238 39.5
Glyma.08G099800 Glycine max HOM05D007799 ORTHO05D009854 1.5e-45 187.2 227 37.0
GSVIVG01021549001 Vitis vinifera HOM05D007799 ORTHO05D009854 1.5e-45 187.2 198 43.4
FvH4_3g05030 Fragaria vesca HOM05D007799 ORTHO05D009854 1.9e-45 186.8 220 41.4
Gohir.D06G203500 Gossypium hirsutum HOM05D007799 ORTHO05D009854 1.9e-45 186.8 211 43.1
Medtr8g079475 Medicago truncatula HOM05D007799 ORTHO05D009854 1.9e-45 186.8 224 39.7
FAN11G0145 Fragaria x ananassa HOM05D007799 ORTHO05D009854 2.5e-45 186.4 220 40.9
MD05G1279400 Malus domestica HOM05D007799 ORTHO05D009854 2.5e-45 186.4 233 38.2
VMungo0251G0945 Vigna mungo HOM05D007799 ORTHO05D009854 3.3e-45 186.0 225 38.2
CDE12G0863 Ceratophyllum demersum HOM05D007799 ORTHO05D009854 5.6e-45 185.3 219 41.6
FAN16G3425 Fragaria x ananassa HOM05D007799 ORTHO05D009854 5.6e-45 185.3 220 41.4
Nn3g20329 Nelumbo nucifera HOM05D007799 ORTHO05D009854 5.6e-45 185.3 221 42.5
PGSC0003DMG400002292 Solanum tuberosum HOM05D007799 ORTHO05D009854 5.6e-45 185.3 239 41.4
DCAR_003890 Daucus carota HOM05D007799 ORTHO05D009854 9.6e-45 184.5 239 38.9
Phvul.002G177900 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 6.2e-44 181.8 221 37.1
HPP92_028169 Vanilla planifolia HOM05D007799 ORTHO05D009854 2.4e-43 179.9 221 41.2
CANSAT35G1982 Cannabis sativa HOM05D007799 ORTHO05D009854 6.9e-43 178.3 220 39.5
arahy.Tifrunner.gnm1.ann1.NZ6SRJ Arachis hypogaea HOM05D007799 ORTHO05D009854 1.2e-42 177.6 217 39.2
arahy.Tifrunner.gnm1.ann1.80ML42 Arachis hypogaea HOM05D007799 ORTHO05D009854 7.6e-42 174.9 217 38.7
Haze_05684 Corylus avellana HOM05D007799 ORTHO05D009854 2.2e-41 173.3 233 37.3
Lsat_1_v5_gn_7_27461 Lactuca sativa HOM05D007799 ORTHO05D009854 3.8e-41 172.6 231 39.4
HanXRQChr15g0482011 Helianthus annuus HOM05D007799 ORTHO05D009854 6.4e-41 171.8 228 38.6
Migut.K01168 Erythranthe guttata HOM05D007799 ORTHO05D009854 1.1e-40 171.0 208 37.0
Cc00_g02020 Coffea canephora HOM05D007799 ORTHO05D009854 1.9e-40 170.2 233 35.6
SalBow8G4130 Salvia bowleyana HOM05D007799 ORTHO05D009854 2.4e-40 169.9 223 38.1
CsaV3_1G036880 Cucumis sativus L. HOM05D007799 ORTHO05D009854 3.2e-40 169.5 211 37.4
Lalb_Chr13g0294011 Lupinus albus HOM05D007799 ORTHO05D009854 1.6e-39 167.2 235 35.3
arahy.Tifrunner.gnm1.ann1.W0WEAA Arachis hypogaea HOM05D007799 ORTHO05D009854 1.3e-38 164.1 228 35.1
HanXRQChr04g0116571 Helianthus annuus HOM05D007799 ORTHO05D009854 1.7e-38 163.7 235 36.2
arahy.Tifrunner.gnm1.ann1.GW4I6G Arachis hypogaea HOM05D002205 ORTHO05D004847 2.3e-38 163.3 228 35.1
TAR624G0778 Trochodendron aralioides HOM05D007799 ORTHO05D009854 3.3e-37 159.5 159 44.7
vmacro03431 Vaccinium macrocarpon HOM05D007799 ORTHO05D009854 5.6e-37 158.7 240 37.1
Actinidia32344 Actinidia chinensis HOM05D007799 ORTHO05D009854 1.3e-36 157.5 181 38.7
ECA236G2997 Erigeron canadensis HOM05D007799 ORTHO05D009854 1.3e-36 157.5 202 40.1
Nitab4.5_0000315g0030 Nicotiana tabacum HOM05D007799 ORTHO05D009854 1.8e-35 153.7 240 34.6
ClCG03G006490 Citrullus lanatus HOM05D007799 ORTHO05D009854 2.0e-34 150.2 226 34.5
Sed0012400 Sechium edule HOM05D007799 ORTHO05D009854 7.6e-34 148.3 212 36.3
Phvul.006G168136 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 1.6e-31 140.6 170 36.5
DCAR_007872 Daucus carota HOM05D007799 ORTHO05D009854 1.3e-30 137.5 243 33.3
TPR.G9572 Trifolium pratense HOM05D007799 ORTHO05D009854 3.3e-29 132.9 168 38.7
Dinv32213 Davidia involucrata HOM05D007799 ORTHO05D009854 2.1e-28 130.2 157 41.4
SEGI_29226 Sequoiadendron giganteum HOM05D007799 ORTHO05D009854 2.1e-23 113.6 170 35.9
Sopen08g008720 Solanum pennellii HOM05D007799 ORTHO05D009854 1.8e-19 100.5 140 40.7
MELO3C035703.2 Cucumis melo HOM05D007799 ORTHO05D009854 9.0e-19 98.2 169 31.4
Solyc08g023510.3 Solanum lycopersicum HOM05D007799 ORTHO05D009854 2.6e-18 96.7 132 40.9
HPP92_026526 Vanilla planifolia HOM05D007799 ORTHO05D009854 4.9e-17 92.4 85 47.1
SEGI_20716 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 6.0e-15 85.5 212 23.1
Lj1C1169G11 Lonicera japonica HOM05D002205 ORTHO05D004847 7.9e-15 85.1 89 38.2
SEGI_23668 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 2.3e-14 83.6 213 25.8
TPR.G18987 Trifolium pratense HOM05D007799 ORTHO05D009854 2.3e-14 83.6 69 50.7
SEGI_17039 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 1.9e-13 80.5 215 26.5
SEGI_07596 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 7.4e-13 78.6 207 25.1
SEGI_25170 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 7.4e-13 78.6 216 27.8
SEGI_24243 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 2.8e-12 76.6 218 26.6
SEGI_16642 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 4.8e-12 75.9 210 24.8
SEGI_12105 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 9.0e-11 71.6 210 23.3
SEGI_17763 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 1.2e-10 71.2 218 26.1
SEGI_23256 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 5.9e-10 68.9 179 26.8


User provided reference genes

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