Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1096G134 Amborella trichopoda HOM05D006876 ORTHO05D008708 1.3e-137 493.0 244 100.0
Peaxi162Scf00003g05358 Petunia axillaris HOM05D006876 ORTHO05D008708 3.7e-52 209.1 245 48.6
MBI19_g10813_MAGBIO Magnolia biondii HOM05D006876 ORTHO05D008708 6.3e-52 208.4 226 49.1
Nitab4.5_0000123g0090 Nicotiana tabacum HOM05D006876 ORTHO05D008708 2.4e-51 206.5 247 48.6
Dinv13650 Davidia involucrata HOM05D006876 ORTHO05D008708 3.5e-50 202.6 217 48.4
Solyc10g076930.2 Solanum lycopersicum HOM05D006876 ORTHO05D008708 3.5e-50 202.6 255 46.7
Sopen10g028620 Solanum pennellii HOM05D006876 ORTHO05D008708 3.5e-50 202.6 255 46.7
Sabra06G0019500 Salix brachista HOM05D006876 ORTHO05D008708 5.9e-50 201.8 245 46.9
GSVIVG01025828001 Vitis vinifera HOM05D006876 ORTHO05D008708 1.3e-49 200.7 222 48.2
Nitab4.5_0002131g0070 Nicotiana tabacum HOM05D006876 ORTHO05D008708 1.7e-49 200.3 264 47.0
Prupe.7G023500 Prunus persica HOM05D006876 ORTHO05D008708 1.7e-49 200.3 249 45.8
PGR142G2444 Punica granatum HOM05D006876 ORTHO05D008708 2.2e-49 199.9 247 47.0
PGSC0003DMG400007191 Solanum tuberosum HOM05D006876 ORTHO05D008708 6.5e-49 198.4 258 45.7
Manes.09G001600 Manihot esculenta HOM05D006876 ORTHO05D008708 8.5e-49 198.0 245 45.7
Cc06_g21190 Coffea canephora HOM05D006876 ORTHO05D008708 1.5e-48 197.2 207 47.3
CSS0024544 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 1.9e-48 196.8 248 45.6
unitig_899.g15477 Utricularia gibba HOM05D006876 ORTHO05D008708 1.9e-48 196.8 262 45.0
Hund24486 Selenicereus undatus HOM05D006876 ORTHO05D008708 9.4e-48 194.5 230 48.3
Potri.006G026300 Populus trichocarpa HOM05D006876 ORTHO05D008708 3.6e-47 192.6 245 44.9
Sp5g05770 Schrenkiella parvula HOM05D006876 ORTHO05D008708 4.7e-47 192.2 204 48.5
CiPaw.09G161500 Carya illinoinensis HOM05D006876 ORTHO05D008708 6.1e-47 191.8 211 51.2
ClCG04G005040 Citrullus lanatus HOM05D006876 ORTHO05D008708 1.0e-46 191.0 251 45.4
Thhalv10006232m.g Eutrema salsugineum HOM05D006876 ORTHO05D008708 1.4e-46 190.7 200 50.0
CsaV3_4G029000 Cucumis sativus L. HOM05D006876 ORTHO05D008708 2.3e-46 189.9 249 44.2
TAR623G1567 Trochodendron aralioides HOM05D006876 ORTHO05D008708 2.3e-46 189.9 149 60.4
BcaC07g40117 Brassica carinata HOM05D006876 ORTHO05D008708 4.0e-46 189.1 244 44.3
Ah.13g077470 Amaranthus hybridus HOM05D006876 ORTHO05D008708 5.2e-46 188.7 222 46.4
BcaC07g39992 Brassica carinata HOM05D006876 ORTHO05D008708 6.8e-46 188.3 199 49.2
Thecc.05G117700 Theobroma cacao HOM05D006876 ORTHO05D008708 6.8e-46 188.3 249 43.8
SalBow1G4764 Salvia bowleyana HOM05D006876 ORTHO05D008708 8.8e-46 188.0 260 44.2
TWI53G1364 Tripterygium wilfordii HOM05D006876 ORTHO05D008708 8.8e-46 188.0 214 46.3
Carub.0005s2355 Capsella rubella HOM05D006876 ORTHO05D008708 1.2e-45 187.6 201 47.3
Lalb_Chr24g0400801 Lupinus albus HOM05D006876 ORTHO05D008708 1.2e-45 187.6 208 47.6
MD12G1111100 Malus domestica HOM05D006876 ORTHO05D008708 1.2e-45 187.6 215 46.5
C08p32050 Brassica napus HOM05D006876 ORTHO05D008708 1.5e-45 187.2 199 49.2
BolC8t50823H Brassica oleracea HOM05D006876 ORTHO05D008708 1.5e-45 187.2 199 49.2
MELO3C019167.2 Cucumis melo HOM05D006876 ORTHO05D008708 1.5e-45 187.2 249 44.2
THA.LOC104803253 Tarenaya hassleriana HOM05D006876 ORTHO05D008708 1.5e-45 187.2 214 46.7
Cfa019902 Carpinus fangiana HOM05D006876 ORTHO05D008708 2.0e-45 186.8 215 45.1
PSO339G4949 Papaver somniferum HOM05D006876 ORTHO05D008708 2.6e-45 186.4 251 44.2
vmacro07595 Vaccinium macrocarpon HOM05D006876 ORTHO05D008708 2.6e-45 186.4 276 43.1
Os01g0810200 Oryza sativa ssp. japonica HOM05D006876 ORTHO05D008708 4.4e-45 185.7 248 42.7
RhsimUnG0021300 Rhododendron simsii HOM05D006876 ORTHO05D008708 4.4e-45 185.7 260 43.8
SGA_v2.0_scaffold123G33492 Striga asiatica HOM05D001269 ORTHO05D001083 4.4e-45 185.7 258 42.2
Ciclev10012641m.g Citrus clementina HOM05D006876 ORTHO05D008708 5.7e-45 185.3 230 42.6
Gohir.A13G086570 Gossypium hirsutum HOM05D006876 ORTHO05D008708 5.7e-45 185.3 248 42.7
MSTRG.10760 Avicennia marina HOM05D006876 ORTHO05D008708 7.5e-45 184.9 255 41.6
Cpa.g.sc33.174 Carica papaya HOM05D006876 ORTHO05D008708 7.5e-45 184.9 247 44.5
Duzib114G0933 Durio zibethinus HOM05D006876 ORTHO05D008708 7.5e-45 184.9 216 44.9
Eucgr.K01704 Eucalyptus grandis HOM05D006876 ORTHO05D008708 7.5e-45 184.9 249 43.0
Gohir.D13G092600 Gossypium hirsutum HOM05D006876 ORTHO05D008708 9.8e-45 184.5 246 42.7
EL10Ac3g07376 Beta vulgaris HOM05D006876 ORTHO05D008708 1.3e-44 184.1 231 45.9
QL07p015416 Quercus lobata HOM05D006876 ORTHO05D008708 1.3e-44 184.1 253 41.9
Atru.chr8.919 Acer truncatum HOM05D006876 ORTHO05D008708 1.7e-44 183.7 233 44.6
AL5G38200 Arabidopsis lyrata HOM05D006876 ORTHO05D008708 1.7e-44 183.7 200 48.0
Migut.K00190 Erythranthe guttata HOM05D006876 ORTHO05D008708 1.7e-44 183.7 210 45.2
COL.COLO4_21445 Corchorus olitorius HOM05D006876 ORTHO05D008708 2.2e-44 183.3 247 44.9
Aa31LG10G11670 Aethionema arabicum HOM05D006876 ORTHO05D008708 2.8e-44 183.0 205 47.3
CARHR166970 Cardamine hirsuta HOM05D006876 ORTHO05D008708 3.7e-44 182.6 215 48.4
FAN19G1913 Fragaria x ananassa HOM05D006876 ORTHO05D008708 4.8e-44 182.2 244 43.9
arahy.Tifrunner.gnm1.ann1.SXUX32 Arachis hypogaea HOM05D006876 ORTHO05D008708 6.3e-44 181.8 241 43.2
Lj1g0024709 Lotus japonicus HOM05D006876 ORTHO05D008708 6.3e-44 181.8 210 45.7
PSO384G4569 Papaver somniferum HOM05D006876 ORTHO05D008708 6.3e-44 181.8 209 46.9
A09p49640 Brassica napus HOM05D006876 ORTHO05D008708 8.3e-44 181.4 205 46.8
BraA09t40417Z Brassica rapa HOM05D006876 ORTHO05D008708 8.3e-44 181.4 205 46.8
Aqoxy1G01505 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 1.1e-43 181.0 129 65.1
CANSAT78G2074 Cannabis sativa HOM05D006876 ORTHO05D008708 1.1e-43 181.0 254 43.7
Sc19g0007790 Simmondsia chinensis HOM05D006876 ORTHO05D008708 1.1e-43 181.0 221 45.7
Nn7g37203 Nelumbo nucifera HOM05D006876 ORTHO05D008708 1.4e-43 180.6 179 52.0
FAN28G2491 Fragaria x ananassa HOM05D006876 ORTHO05D008708 1.8e-43 180.3 246 43.9
Zm00001eb150270 Zea mays HOM05D006876 ORTHO05D008708 1.8e-43 180.3 249 43.0
arahy.Tifrunner.gnm1.ann1.U8TZLL Arachis hypogaea HOM05D006876 ORTHO05D008708 2.4e-43 179.9 241 42.7
Hma1.2p1_0694F.1_g204340 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 2.4e-43 179.9 251 43.4
RcHm_v2.0_Chr7g0183121 Rosa chinensis HOM05D006876 ORTHO05D008708 2.4e-43 179.9 248 44.0
Sed0006068 Sechium edule HOM05D006876 ORTHO05D008708 2.4e-43 179.9 248 41.5
Hund24492 Selenicereus undatus HOM05D006876 ORTHO05D008708 4.1e-43 179.1 212 48.1
AUR62020968 Chenopodium quinoa HOM05D006876 ORTHO05D008708 5.4e-43 178.7 209 45.5
AT3G56820 Arabidopsis thaliana HOM05D006876 ORTHO05D008708 1.2e-42 177.6 204 47.1
Lsat_1_v5_gn_6_24200 Lactuca sativa HOM05D006876 ORTHO05D008708 1.6e-42 177.2 245 42.9
Migut.K00192 Erythranthe guttata HOM05D006876 ORTHO05D008708 2.7e-42 176.4 200 45.0
Gorai.010G139600 Gossypium raimondii HOM05D006876 ORTHO05D008708 2.7e-42 176.4 256 41.4
SEGI_40976 Sequoiadendron giganteum HOM05D006876 ORTHO05D008708 3.5e-42 176.0 131 62.6
VMungo1383G0045 Vigna mungo HOM05D006876 ORTHO05D008708 5.9e-42 175.3 200 45.5
Phvul.001G101300 Phaseolus vulgaris HOM05D006876 ORTHO05D008708 1.0e-41 174.5 200 45.5
Psat3g083640 Pisum sativum HOM05D006876 ORTHO05D008708 5.0e-41 172.2 184 48.4
Medtr7g088040 Medicago truncatula HOM05D006876 ORTHO05D008708 1.5e-40 170.6 236 42.8
Aqoxy1G01501 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 1.6e-39 167.2 243 42.0
arahy.Tifrunner.gnm1.ann1.R6YTNA Arachis hypogaea HOM05D006876 ORTHO05D008708 8.0e-39 164.9 149 52.3
Glyma.19G122400 Glycine max HOM05D006876 ORTHO05D008708 1.2e-37 161.0 130 57.7
Glyma.03G003700 Glycine max HOM05D006876 ORTHO05D008708 2.0e-37 160.2 200 43.0
Haze_20349 Corylus avellana HOM05D006876 ORTHO05D008708 2.2e-36 156.8 248 38.3
Lj4A828G46 Lonicera japonica HOM05D006876 ORTHO05D008708 5.4e-35 152.1 113 62.8
ECA233G0065 Erigeron canadensis HOM05D000444 ORTHO05D000489 2.0e-34 150.2 109 61.5
Hma1.2p1_0694F.1_g204350 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 3.5e-34 149.4 109 65.1
CSS0021314 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 4.5e-34 149.1 110 60.0
Oeu032953.2 Olea europaea HOM05D006876 ORTHO05D008708 1.3e-33 147.5 212 40.6
DCAR_020618 Daucus carota HOM05D006876 ORTHO05D008708 1.7e-33 147.1 114 61.4
QL05p001451 Quercus lobata HOM05D006876 ORTHO05D008708 3.6e-31 139.4 99 61.6
Actinidia37859 Actinidia chinensis HOM05D006876 ORTHO05D008708 7.3e-24 115.2 88 61.4
FvH4_1g29600 Fragaria vesca HOM05D006876 ORTHO05D008708 1.4e-22 110.9 177 39.5
CBR_g17867 Chara braunii HOM05D006876 ORTHO05D008708 1.2e-21 107.8 122 42.6
Lalb_Chr02g0157641 Lupinus albus HOM05D006876 ORTHO05D008708 7.5e-21 105.1 179 35.8
arahy.Tifrunner.gnm1.ann1.8Z6XIB Arachis hypogaea HOM05D006876 ORTHO05D008708 3.7e-20 102.8 61 68.9
arahy.Tifrunner.gnm1.ann1.QI3NWI Arachis hypogaea HOM05D006876 ORTHO05D008708 1.4e-19 100.9 77 57.1
MCO02G060 Micromonas commoda HOM05D006876 ORTHO05D008708 5.4e-19 99.0 126 39.7
arahy.Tifrunner.gnm1.ann1.S4H51W Arachis hypogaea HOM05D006876 ORTHO05D008708 9.2e-19 98.2 81 51.9
Oeu007164.1 Olea europaea HOM05D006876 ORTHO05D008708 5.6e-16 89.0 70 57.1
QL05p001731 Quercus lobata HOM05D006876 ORTHO05D008708 7.3e-16 88.6 68 61.8
QL05p085390 Quercus lobata HOM05D006876 ORTHO05D008708 7.3e-16 88.6 68 61.8
Ca_08331_v3 Cicer arietinum L. HOM05D006876 ORTHO05D008708 2.1e-10 70.5 68 51.5
arahy.Tifrunner.gnm1.ann1.Q5BN79 Arachis hypogaea HOM05D006876 ORTHO05D008708 6.6e-09 65.5 58 53.4
Glyma.10G143650 Glycine max HOM05D006876 ORTHO05D008708 6.6e-09 65.5 44 61.4
arahy.Tifrunner.gnm1.ann1.ERVJ4V Arachis hypogaea HOM05D006876 ORTHO05D008708 2.1e-07 60.5 129 29.5


User provided reference genes

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