Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1096G118 Amborella trichopoda HOM05D007667 ORTHO05D008033 5.4e-235 817.4 447 100.0
MBI13_g29622_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 2.7e-48 197.2 458 38.2
TAR623G0652 Trochodendron aralioides HOM05D007667 ORTHO05D008033 4.1e-33 146.7 456 30.5
GSVIVG01025830001 Vitis vinifera HOM05D007667 ORTHO05D008033 1.1e-28 132.1 448 29.9
Nn7g37184 Nelumbo nucifera HOM05D007667 ORTHO05D001109 2.2e-26 124.4 438 31.3
Cfa019904 Carpinus fangiana HOM05D007667 ORTHO05D008033 5.4e-25 119.8 425 29.6
CiPaw.09G161700 Carya illinoinensis HOM05D007667 ORTHO05D008033 7.1e-25 119.4 437 30.0
QL07p015392 Quercus lobata HOM05D007667 ORTHO05D008033 1.6e-24 118.2 419 30.5
PSO339G5815 Papaver somniferum HOM05D007667 ORTHO05D008033 1.3e-23 115.2 492 27.0
Sabra16G0030500 Salix brachista HOM05D007667 ORTHO05D008033 6.6e-23 112.8 459 31.4
arahy.Tifrunner.gnm1.ann1.B2YDCU Arachis hypogaea HOM05D007667 ORTHO05D008033 8.6e-23 112.5 453 28.5
arahy.Tifrunner.gnm1.ann1.2JVN0K Arachis hypogaea HOM05D007667 ORTHO05D008033 2.1e-21 107.8 451 28.2
MD12G1111200 Malus domestica HOM05D007667 ORTHO05D008033 2.1e-21 107.8 442 27.6
VMungo1383G2866 Vigna mungo HOM05D007667 ORTHO05D008033 3.6e-21 107.1 442 28.7
Aqoxy3G03841 Aquilegia oxysepala HOM05D007667 ORTHO05D008033 6.2e-21 106.3 433 27.3
CANSAT01G1982 Cannabis sativa HOM05D007667 ORTHO05D008033 1.1e-20 105.5 468 27.4
Haze_20347 Corylus avellana HOM05D007667 ORTHO05D008033 1.1e-20 105.5 366 29.0
Glyma.19G122200 Glycine max HOM05D007667 ORTHO05D008033 3.1e-20 104.0 450 26.4
Psat0s3111g0200 Pisum sativum HOM05D007667 ORTHO05D008033 3.1e-20 104.0 456 27.4
PSO384G0308 Papaver somniferum HOM05D007667 ORTHO05D008033 4.0e-20 103.6 490 26.9
Medtr7g087970 Medicago truncatula HOM05D007667 ORTHO05D008033 5.2e-20 103.2 458 26.9
CDE02G4005 Ceratophyllum demersum HOM05D000558 ORTHO05D008033 2.0e-19 101.3 391 28.6
Lj1g0016001 Lotus japonicus HOM05D007667 ORTHO05D008033 2.0e-19 101.3 457 28.7
Lalb_Chr14g0365211 Lupinus albus HOM05D007667 ORTHO05D008033 4.4e-19 100.1 453 27.6
Phvul.001G101500 Phaseolus vulgaris HOM05D007667 ORTHO05D008033 5.8e-19 99.8 441 27.7
Dinv02787 Davidia involucrata HOM05D007667 ORTHO05D008033 2.2e-18 97.8 313 32.6
Glyma.03G003800 Glycine max HOM05D007667 ORTHO05D008033 2.2e-18 97.8 446 27.1
Lj1A1064T35 Lonicera japonica HOM05D007667 ORTHO05D008033 2.2e-18 97.8 226 35.8
CSS0027019 Camellia sinensis var. sinensis HOM05D007667 ORTHO05D008033 3.8e-18 97.1 377 30.0
Potri.006G026600 Populus trichocarpa HOM05D007667 ORTHO05D008033 3.8e-18 97.1 456 28.5
Sc13g0000730 Simmondsia chinensis HOM05D007667 ORTHO05D008033 4.9e-18 96.7 220 36.4
PGR142G2092 Punica granatum HOM05D007667 ORTHO05D008033 6.4e-18 96.3 469 30.9
Prupe.7G023900 Prunus persica HOM05D007667 ORTHO05D008033 8.4e-18 95.9 186 40.9
TWI77G1010 Tripterygium wilfordii HOM05D007667 ORTHO05D008033 1.4e-17 95.1 187 43.3
Potri.016G024600 Populus trichocarpa HOM05D007667 ORTHO05D008033 1.9e-17 94.7 204 40.7
TPR.G23684 Trifolium pratense HOM05D007667 ORTHO05D008033 3.5e-16 90.5 434 27.4
Sabra06G0019700 Salix brachista HOM05D007667 ORTHO05D008033 1.0e-15 89.0 447 29.5
HPP92_012452 Vanilla planifolia HOM05D007667 ORTHO05D008033 3.0e-15 87.4 219 35.6
MSTRG.6277 Avicennia marina HOM05D007667 ORTHO05D008033 8.7e-15 85.9 208 36.1
Ca_08329_v3 Cicer arietinum L. HOM05D007667 ORTHO05D008033 3.3e-14 84.0 206 31.6
ClCG04G005020 Citrullus lanatus HOM05D007667 ORTHO05D008033 7.3e-14 82.8 211 34.1
Eucgr.K01702 Eucalyptus grandis HOM05D007667 ORTHO05D008033 7.3e-14 82.8 209 31.6
Migut.J01575 Erythranthe guttata HOM05D007667 ORTHO05D008033 9.6e-14 82.4 420 26.7
Hund19052 Selenicereus undatus HOM05D007667 ORTHO05D008033 1.6e-13 81.6 209 39.2
Ah.13g077440 Amaranthus hybridus HOM05D007667 ORTHO05D008033 2.1e-13 81.3 228 35.1
arahy.Tifrunner.gnm1.ann1.8XR3F9 Arachis hypogaea HOM05D007667 ORTHO05D008033 2.1e-13 81.3 199 35.2
arahy.Tifrunner.gnm1.ann1.EU10QV Arachis hypogaea HOM05D007667 ORTHO05D008033 2.8e-13 80.9 198 33.3
Cfa010473 Carpinus fangiana HOM05D007667 ORTHO05D008033 3.1e-12 77.4 169 36.1
CDE04G0047 Ceratophyllum demersum HOM05D007667 ORTHO05D008033 6.9e-12 76.3 288 27.8
CsaV3_4G028970 Cucumis sativus L. HOM05D007667 ORTHO05D008033 6.9e-12 76.3 206 40.8
Lalb_Chr22g0358171 Lupinus albus HOM05D007667 ORTHO05D008033 9.0e-12 75.9 207 31.9
Sed0012185 Sechium edule HOM05D007667 ORTHO05D008033 9.0e-12 75.9 211 34.1
SalBow6G3731 Salvia bowleyana HOM05D007667 ORTHO05D008033 2.6e-11 74.3 184 36.4
Nitab4.5_0002201g0030 Nicotiana tabacum HOM05D007667 ORTHO05D008033 4.4e-11 73.6 174 35.1
MBI13_g08647_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 9.9e-11 72.4 145 40.0
vmacro07594 Vaccinium macrocarpon HOM05D007667 ORTHO05D008033 3.8e-10 70.5 224 29.9
Oeu041986.1 Olea europaea HOM05D007667 ORTHO05D008033 1.9e-09 68.2 196 31.1
Thecc.05G130400 Theobroma cacao HOM05D007667 ORTHO05D008033 1.9e-09 68.2 183 33.9
MBI13_g08646_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 2.4e-09 67.8 57 57.9
arahy.Tifrunner.gnm1.ann1.48UEJW Arachis hypogaea HOM05D007667 ORTHO05D008033 4.2e-09 67.0 107 40.2
arahy.Tifrunner.gnm1.ann1.S7MPKE Arachis hypogaea HOM05D007667 ORTHO05D008033 4.2e-09 67.0 149 35.6
Dinv21555 Davidia involucrata HOM05D007667 ORTHO05D008033 5.4e-09 66.6 128 38.3
AUR62020979 Chenopodium quinoa HOM05D003743 ORTHO05D004311 7.1e-09 66.2 118 43.2
Os03g0319200 Oryza sativa ssp. japonica HOM05D043175 ORTHO05D008033 7.1e-09 66.2 126 38.9
SGA_v2.0_scaffold66G22329 Striga asiatica HOM05D007667 ORTHO05D008033 7.1e-09 66.2 179 36.3
arahy.Tifrunner.gnm1.ann1.3W78Z9 Arachis hypogaea HOM05D007667 ORTHO05D008033 1.2e-08 65.5 178 34.3
Manes.08G067300 Manihot esculenta HOM05D007667 ORTHO05D008033 1.2e-08 65.5 345 24.6
EL10Ac3g07362 Beta vulgaris HOM05D007667 ORTHO05D008033 2.1e-08 64.7 436 24.3
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 3.5e-08 63.9 169 36.7
arahy.Tifrunner.gnm1.ann1.NYTL45 Arachis hypogaea HOM05D007667 ORTHO05D008033 6.0e-08 63.2 150 36.0
HPP92_014340 Vanilla planifolia HOM05D007667 ORTHO05D008033 7.9e-08 62.8 196 31.6
Oeu060747.1 Olea europaea HOM05D007667 ORTHO05D008033 1.0e-07 62.4 195 32.8
RcHm_v2.0_Chr3g0495051 Rosa chinensis HOM05D007667 ORTHO05D008033 1.3e-07 62.0 218 30.7
RhsimUnG0021200 Rhododendron simsii HOM05D007667 ORTHO05D008033 2.3e-07 61.2 211 32.2
arahy.Tifrunner.gnm1.ann1.8931ZB Arachis hypogaea HOM05D007667 ORTHO05D008033 3.9e-07 60.5 152 34.2
Zm00001eb015190 Zea mays HOM05D043175 ORTHO05D008033 6.6e-07 59.7 126 37.3
MBI13_g31583_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 8.7e-07 59.3 146 35.6
FvH4_1g29470 Fragaria vesca HOM05D007667 ORTHO05D008033 2.5e-06 57.8 130 33.8
arahy.Tifrunner.gnm1.ann1.W45WAC Arachis hypogaea HOM05D007667 ORTHO05D008033 7.3e-06 56.2 160 33.8
Cc06_g20370 Coffea canephora HOM05D007667 ORTHO05D008033 7.3e-06 56.2 191 31.9
Duzib128G0300 Durio zibethinus HOM05D007667 ORTHO05D008033 9.6e-06 55.8 185 30.8


User provided reference genes

Program Settings