Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1096G089 Amborella trichopoda HOM05D007021 ORTHO05D008916 1.7e-103 379.4 201 100.0
GSVIVG01008459001 Vitis vinifera HOM05D007021 ORTHO05D008916 4.7e-53 211.8 184 66.3
Nn7g37125 Nelumbo nucifera HOM05D007021 ORTHO05D008916 3.4e-51 205.7 211 59.2
CSS0017706 Camellia sinensis var. sinensis HOM05D007021 ORTHO05D008916 4.1e-49 198.7 160 66.9
Cfa019639 Carpinus fangiana HOM05D007021 ORTHO05D008916 9.2e-49 197.6 173 64.2
TAR623G0728 Trochodendron aralioides HOM05D007021 ORTHO05D008916 1.2e-48 197.2 209 58.4
Actinidia18882 Actinidia chinensis HOM05D004562 ORTHO05D005435 2.7e-48 196.1 159 65.4
Ciclev10009503m.g Citrus clementina HOM05D007021 ORTHO05D008916 2.7e-48 196.1 177 59.3
Gohir.A09G174900 Gossypium hirsutum HOM05D007021 ORTHO05D008916 6.0e-48 194.9 145 72.4
Gohir.D09G170185 Gossypium hirsutum HOM05D007021 ORTHO05D008916 6.0e-48 194.9 145 72.4
Gorai.006G191500 Gossypium raimondii HOM05D007021 ORTHO05D008916 6.0e-48 194.9 145 72.4
Thecc.03G058600 Theobroma cacao HOM05D007021 ORTHO05D008916 6.0e-48 194.9 145 72.4
Aqoxy1G00082 Aquilegia oxysepala HOM05D007021 ORTHO05D008916 1.3e-47 193.7 188 59.6
Manes.06G004800 Manihot esculenta HOM05D007021 ORTHO05D008916 2.3e-47 193.0 148 72.3
COL.COLO4_28897 Corchorus olitorius HOM05D007021 ORTHO05D008916 6.6e-47 191.4 145 71.0
MSTRG.11303 Avicennia marina HOM05D007021 ORTHO05D008916 8.6e-47 191.0 154 66.2
Dinv18013 Davidia involucrata HOM05D007021 ORTHO05D008916 1.9e-46 189.9 145 70.3
Gorai.003G035100 Gossypium raimondii HOM05D007021 ORTHO05D008916 1.9e-46 189.9 145 71.7
HanXRQChr15g0486591 Helianthus annuus HOM05D007021 ORTHO05D008916 1.9e-46 189.9 154 66.9
MD06G1228200 Malus domestica HOM05D007021 ORTHO05D008916 1.9e-46 189.9 147 67.3
QL10p030610 Quercus lobata HOM05D007021 ORTHO05D008916 2.5e-46 189.5 182 58.2
CiPaw.16G096000 Carya illinoinensis HOM05D007021 ORTHO05D008916 3.3e-46 189.1 144 73.6
Lsat_1_v5_gn_8_115881 Lactuca sativa HOM05D007021 ORTHO05D008916 3.3e-46 189.1 158 67.1
MBI13_g41749_MAGBIO Magnolia biondii HOM05D007021 ORTHO05D008916 3.3e-46 189.1 114 84.2
Atru.chr9.1670 Acer truncatum HOM05D007021 ORTHO05D008916 4.3e-46 188.7 178 59.6
Eucgr.K02276 Eucalyptus grandis HOM05D007021 ORTHO05D008916 4.3e-46 188.7 166 64.5
Gohir.D03G033500 Gossypium hirsutum HOM05D007021 ORTHO05D008916 7.3e-46 188.0 145 70.3
Gohir.D08G085600 Gossypium hirsutum HOM05D007021 ORTHO05D008916 7.3e-46 188.0 145 70.3
Potri.015G036500 Populus trichocarpa HOM05D007021 ORTHO05D008916 7.3e-46 188.0 149 69.1
Solyc05g006440.4 Solanum lycopersicum HOM05D007021 ORTHO05D008916 9.5e-46 187.6 143 68.5
HPP92_019433 Vanilla planifolia HOM05D007021 ORTHO05D008916 1.6e-45 186.8 143 69.9
Hma1.2p1_0163F.1_g073000 Hydrangea macrophylla HOM05D007021 ORTHO05D008916 2.8e-45 186.0 154 65.6
Sopen05g002370 Solanum pennellii HOM05D007021 ORTHO05D008916 2.8e-45 186.0 143 67.8
Sc04g0004860 Simmondsia chinensis HOM05D007021 ORTHO05D008916 4.7e-45 185.3 139 71.2
Migut.I00268 Erythranthe guttata HOM05D007021 ORTHO05D008916 8.0e-45 184.5 154 65.6
TWI81G0868 Tripterygium wilfordii HOM05D007021 ORTHO05D008916 1.4e-44 183.7 141 71.6
CANSAT80G1746 Cannabis sativa HOM05D007021 ORTHO05D008916 2.3e-44 183.0 144 68.1
Lj9A418T22 Lonicera japonica HOM05D007021 ORTHO05D008916 2.3e-44 183.0 114 79.8
PSO339G6055 Papaver somniferum HOM05D007021 ORTHO05D008916 3.1e-44 182.6 197 56.3
Cpa.g.sc3.381 Carica papaya HOM05D007021 ORTHO05D008916 4.0e-44 182.2 176 59.7
PGR044G2095 Punica granatum HOM05D007021 ORTHO05D008916 4.0e-44 182.2 129 72.9
CANSAT80G0297 Cannabis sativa HOM05D007021 ORTHO05D008916 5.2e-44 181.8 144 68.1
Gorai.004G090100 Gossypium raimondii HOM05D007021 ORTHO05D008916 5.2e-44 181.8 140 71.4
Phvul.002G331000 Phaseolus vulgaris HOM05D007021 ORTHO05D008916 6.8e-44 181.4 187 57.2
Prupe.5G234700 Prunus persica HOM05D007021 ORTHO05D008916 6.8e-44 181.4 159 64.8
Sabra15G0029900 Salix brachista HOM05D007021 ORTHO05D008916 6.8e-44 181.4 148 66.9
PGSC0003DMG400022612 Solanum tuberosum HOM05D007021 ORTHO05D008916 6.8e-44 181.4 170 61.2
Rhsim12G0138000 Rhododendron simsii HOM05D007021 ORTHO05D008916 1.2e-43 180.6 116 80.2
Glyma.08G055300 Glycine max HOM05D007021 ORTHO05D008916 2.0e-43 179.9 136 70.6
MELO3C017374.2 Cucumis melo HOM05D007021 ORTHO05D008916 2.6e-43 179.5 156 67.9
Glyma.05G246900 Glycine max HOM05D007021 ORTHO05D008916 3.4e-43 179.1 129 72.1
SEGI_41594 Sequoiadendron giganteum HOM05D007021 ORTHO05D008916 5.8e-43 178.3 118 81.4
CAN.G159.4 Capsicum annuum HOM05D007021 ORTHO05D008916 9.8e-43 177.6 114 78.9
Lalb_Chr05g0221591 Lupinus albus HOM05D007021 ORTHO05D008916 9.8e-43 177.6 175 56.0
THA.LOC104821829 Tarenaya hassleriana HOM05D007021 ORTHO05D008916 2.9e-42 176.0 127 70.1
Haze_18883 Corylus avellana HOM05D007021 ORTHO05D008916 3.7e-42 175.6 134 71.6
Nitab4.5_0002312g0020 Nicotiana tabacum HOM05D007021 ORTHO05D008916 3.7e-42 175.6 149 63.8
Nitab4.5_0004119g0020 Nicotiana tabacum HOM05D007021 ORTHO05D008916 3.7e-42 175.6 149 63.8
unitig_899.g15339 Utricularia gibba HOM05D007021 ORTHO05D008916 3.7e-42 175.6 150 67.3
Oeu046158.1 Olea europaea HOM05D007021 ORTHO05D008916 4.9e-42 175.3 112 80.4
arahy.Tifrunner.gnm1.ann1.2FQ1SS Arachis hypogaea HOM05D007021 ORTHO05D008916 6.4e-42 174.9 137 67.9
Cc04_g06110 Coffea canephora HOM05D007021 ORTHO05D008916 6.4e-42 174.9 113 78.8
ECA232G1431 Erigeron canadensis HOM05D000006 ORTHO05D000091 8.3e-42 174.5 114 78.1
FvH4_5g17480 Fragaria vesca HOM05D007021 ORTHO05D008916 8.3e-42 174.5 137 67.9
FAN08G1321 Fragaria x ananassa HOM05D007021 ORTHO05D008916 8.3e-42 174.5 137 67.9
FAN18G1853 Fragaria x ananassa HOM05D007021 ORTHO05D008916 8.3e-42 174.5 137 67.9
RcHm_v2.0_Chr7g0178211 Rosa chinensis HOM05D007021 ORTHO05D008916 8.3e-42 174.5 130 72.3
FAN04G2374 Fragaria x ananassa HOM05D007021 ORTHO05D008916 1.1e-41 174.1 137 67.2
PSO384G2008 Papaver somniferum HOM05D007021 ORTHO05D008916 1.1e-41 174.1 119 76.5
ClCG06G014200 Citrullus lanatus HOM05D007021 ORTHO05D008916 1.4e-41 173.7 147 66.0
VMungo0251G3404 Vigna mungo HOM05D007021 ORTHO05D008916 2.4e-41 172.9 138 68.1
arahy.Tifrunner.gnm1.ann1.I2I16V Arachis hypogaea HOM05D007021 ORTHO05D008916 4.1e-41 172.2 147 66.0
CsaV3_1G004470 Cucumis sativus L. HOM05D007021 ORTHO05D008916 4.1e-41 172.2 146 67.8
CDE04G1339 Ceratophyllum demersum HOM05D000015 ORTHO05D002445 5.4e-41 171.8 153 62.1
Lj4g0002555 Lotus japonicus HOM05D007021 ORTHO05D008916 5.4e-41 171.8 126 72.2
Sed0001257 Sechium edule HOM05D007021 ORTHO05D008916 9.2e-41 171.0 155 62.6
C05p48360 Brassica napus HOM05D007021 ORTHO05D008916 1.2e-40 170.6 129 65.1
FAN13G1201 Fragaria x ananassa HOM05D007021 ORTHO05D008916 1.2e-40 170.6 139 66.9
Hund08707 Selenicereus undatus HOM05D007021 ORTHO05D008916 1.2e-40 170.6 137 68.6
TPR.G1394 Trifolium pratense HOM05D007021 ORTHO05D008916 1.2e-40 170.6 125 71.2
BcaB06g25855 Brassica carinata HOM05D007021 ORTHO05D008916 2.1e-40 169.9 173 53.2
Psat7g001280 Pisum sativum HOM05D007021 ORTHO05D008916 2.1e-40 169.9 107 78.5
Medtr8g107430 Medicago truncatula HOM05D007021 ORTHO05D008916 3.5e-40 169.1 107 78.5
Thhalv10021570m.g Eutrema salsugineum HOM05D007021 ORTHO05D008916 6.0e-40 168.3 142 59.9
Zm00001eb150510 Zea mays HOM05D007021 ORTHO05D008916 7.8e-40 167.9 151 61.6
Os01g0805200 Oryza sativa ssp. japonica HOM05D007021 ORTHO05D008916 1.3e-39 167.2 110 75.5
Pp3c5_23310 Physcomitrium patens HOM05D007021 ORTHO05D008916 1.7e-39 166.8 123 67.5
EL10Ac8g19152 Beta vulgaris HOM05D007021 ORTHO05D008916 2.3e-39 166.4 120 70.8
CARHR093260 Cardamine hirsuta HOM05D007021 ORTHO05D008916 2.3e-39 166.4 129 65.9
Aa31LG8G4800 Aethionema arabicum HOM05D007021 ORTHO05D008916 3.0e-39 166.0 129 65.1
BcaC05g28735 Brassica carinata HOM05D007021 ORTHO05D008916 3.0e-39 166.0 113 71.7
BolC5t33573H Brassica oleracea HOM05D007021 ORTHO05D008916 3.0e-39 166.0 113 71.7
A05p31870 Brassica napus HOM05D007021 ORTHO05D008916 8.6e-39 164.5 108 74.1
BraA05t22019Z Brassica rapa HOM05D007021 ORTHO05D008916 8.6e-39 164.5 108 74.1
Sp3g16050 Schrenkiella parvula HOM05D007021 ORTHO05D008916 1.9e-38 163.3 126 65.9
AagrBONN_evm.TU.Sc2ySwM_340.579 Anthoceros agrestis HOM05D007021 ORTHO05D008916 1.2e-37 160.6 175 52.0
Mapoly0023s0040 Marchantia polymorpha HOM05D007021 ORTHO05D008916 1.6e-37 160.2 137 59.9
Carub.0003s1766 Capsella rubella HOM05D007021 ORTHO05D008916 2.1e-37 159.8 106 73.6
AagrBONN_evm.TU.Sc2ySwM_117.710 Anthoceros agrestis HOM05D007021 ORTHO05D008916 2.8e-37 159.5 175 50.9
AL3G31100 Arabidopsis lyrata HOM05D007021 ORTHO05D008916 3.6e-37 159.1 106 72.6
AT3G17930 Arabidopsis thaliana HOM05D007021 ORTHO05D008916 3.6e-37 159.1 106 72.6
Gohir.1Z049463 Gossypium hirsutum HOM05D007021 ORTHO05D008916 6.8e-36 154.8 145 63.4
SMO353G0175 Selaginella moellendorffii HOM05D007021 ORTHO05D008916 4.4e-35 152.1 141 58.9
CDE07G1635 Ceratophyllum demersum HOM05D007021 ORTHO05D008916 7.8e-32 141.4 139 59.0
Duzib068G0088 Durio zibethinus HOM05D007021 ORTHO05D008916 1.9e-30 136.7 145 56.6
DCAR_014390 Daucus carota HOM05D007021 ORTHO05D008916 2.5e-30 136.3 89 78.7
Peaxi162Scf00828g00016 Petunia axillaris HOM05D007021 ORTHO05D008916 9.5e-30 134.4 86 80.2
CBR_g48186 Chara braunii HOM05D007021 ORTHO05D008916 3.6e-29 132.5 119 57.1
AUR62025165 Chenopodium quinoa HOM05D007021 ORTHO05D008916 2.0e-27 126.7 86 74.4
AUR62029014 Chenopodium quinoa HOM05D007021 ORTHO05D008916 2.0e-27 126.7 86 74.4
Cre01.g000850 Chlamydomonas reinhardtii HOM05D007021 ORTHO05D008916 1.4e-25 120.6 184 40.2
Oeu010907.1 Olea europaea HOM05D007021 ORTHO05D008916 1.3e-18 97.4 143 44.8
MCO16G182 Micromonas commoda HOM05D007021 ORTHO05D008916 2.2e-18 96.7 88 55.7
MD14G1237400 Malus domestica HOM05D007021 ORTHO05D008916 2.4e-17 93.2 78 61.5
PRCOL_00000692 Prasinoderma coloniale HOM05D007021 ORTHO05D008916 5.6e-14 82.0 115 39.1


User provided reference genes

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