Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1096G065 Amborella trichopoda HOM05D000070 ORTHO05D007358 2.8e-152 542.0 280 100.0
ATR0820G242 Amborella trichopoda HOM05D000070 ORTHO05D007358 1.3e-104 383.6 277 77.3
MBI06_g17222_MAGBIO Magnolia biondii HOM05D000070 ORTHO05D007358 1.2e-33 147.9 321 34.6
TAR636G1288 Trochodendron aralioides HOM05D000070 ORTHO05D007358 4.4e-33 146.0 231 40.7
SEGI_06917 Sequoiadendron giganteum HOM05D000070 ORTHO05D007358 8.3e-32 141.7 337 33.2
CDE07G0994 Ceratophyllum demersum HOM05D000070 ORTHO05D007358 1.3e-29 134.4 265 35.5
CDE05G3455 Ceratophyllum demersum HOM05D000070 ORTHO05D007358 1.9e-28 130.6 298 34.6
Aqoxy5G00447 Aquilegia oxysepala HOM05D000070 ORTHO05D007358 2.1e-27 127.1 315 34.6
Ciclev10013654m.g Citrus clementina HOM05D000070 ORTHO05D007358 1.2e-25 121.3 317 31.9
vmacro04768 Vaccinium macrocarpon HOM05D000070 ORTHO05D007358 2.9e-24 116.7 256 38.3
SGA_v2.0_scaffold66G22283 Striga asiatica HOM05D000070 ORTHO05D007358 4.9e-24 115.9 308 32.1
Ca_08370_v3 Cicer arietinum L. HOM05D000070 ORTHO05D007358 6.4e-24 115.5 292 33.2
Lj1g0022985 Lotus japonicus HOM05D000070 ORTHO05D007358 8.4e-24 115.2 266 36.5
Lalb_Chr14g0365611 Lupinus albus HOM05D000070 ORTHO05D007358 1.1e-23 114.8 258 34.9
Nitab4.5_0000123g0590 Nicotiana tabacum HOM05D000070 ORTHO05D007358 1.1e-23 114.8 245 36.3
Thecc.03G306800 Theobroma cacao HOM05D000070 ORTHO05D007358 1.4e-23 114.4 235 35.3
Nitab4.5_0008332g0030 Nicotiana tabacum HOM05D000070 ORTHO05D007358 1.9e-23 114.0 245 36.3
QL07p012633 Quercus lobata HOM05D000070 ORTHO05D007358 1.9e-23 114.0 225 39.1
Dinv40077 Davidia involucrata HOM05D000070 ORTHO05D007358 5.4e-23 112.5 236 37.7
GSVIVG01025783001 Vitis vinifera HOM05D000070 ORTHO05D007358 5.4e-23 112.5 236 39.0
Atru.chr12.1313 Acer truncatum HOM05D000070 ORTHO05D007358 7.1e-23 112.1 193 39.4
Dinv20771 Davidia involucrata HOM05D000070 ORTHO05D007358 7.1e-23 112.1 318 34.3
Duzib084G0952 Durio zibethinus HOM05D000070 ORTHO05D007358 7.1e-23 112.1 255 34.5
COL.COLO4_16973 Corchorus olitorius HOM05D000070 ORTHO05D007358 1.2e-22 111.3 234 35.9
Oeu005223.1 Olea europaea HOM05D000070 ORTHO05D007358 1.2e-22 111.3 311 34.1
Psat3g081080 Pisum sativum HOM05D000070 ORTHO05D007358 1.2e-22 111.3 280 33.2
CSS0017562 Camellia sinensis var. sinensis HOM05D000070 ORTHO05D007358 1.6e-22 110.9 221 40.7
arahy.Tifrunner.gnm1.ann1.GDL09X Arachis hypogaea HOM05D000070 ORTHO05D007358 2.7e-22 110.2 276 33.0
Rhsim07G0200300 Rhododendron simsii HOM05D000070 ORTHO05D007358 7.8e-22 108.6 231 38.5
EL10Ac3g07273 Beta vulgaris HOM05D000070 ORTHO05D007358 1.9e-20 104.0 209 34.0
Migut.J01627 Erythranthe guttata HOM05D000070 ORTHO05D007358 4.3e-20 102.8 314 32.8
Cpa.g.sc5.153 Carica papaya HOM05D000070 ORTHO05D007358 9.6e-20 101.7 235 36.2
arahy.Tifrunner.gnm1.ann1.YU3HKG Arachis hypogaea HOM05D000070 ORTHO05D007358 1.2e-19 101.3 309 30.7
Peaxi162Scf00003g05131 Petunia axillaris HOM05D000070 ORTHO05D007358 1.2e-19 101.3 223 33.6
MSTRG.6311 Avicennia marina HOM05D000070 ORTHO05D007358 2.1e-19 100.5 244 34.0
Sopen10g028980 Solanum pennellii HOM05D000070 ORTHO05D007358 2.8e-19 100.1 324 30.9
Manes.08G062100 Manihot esculenta HOM05D000070 ORTHO05D007358 4.7e-19 99.4 232 36.6
Sabra06G0023400 Salix brachista HOM05D000070 ORTHO05D007358 8.1e-19 98.6 330 30.6
DCAR_020593 Daucus carota HOM05D000070 ORTHO05D007358 1.4e-18 97.8 237 37.6
Potri.006G035000 Populus trichocarpa HOM05D000070 ORTHO05D007358 1.8e-18 97.4 265 34.7
Prupe.3G062600 Prunus persica HOM05D000070 ORTHO05D007358 1.8e-18 97.4 253 33.2
A09p49520 Brassica napus HOM05D000070 ORTHO05D007358 4.0e-18 96.3 286 32.2
BraA09t40406Z Brassica rapa HOM05D000070 ORTHO05D007358 4.0e-18 96.3 286 32.2
Os11g0220400 Oryza sativa ssp. japonica HOM05D000070 ORTHO05D007358 4.0e-18 96.3 313 30.4
Solyc10g078320.2 Solanum lycopersicum HOM05D000070 ORTHO05D007358 4.0e-18 96.3 237 35.4
CAN.G960.72 Capsicum annuum HOM05D000070 ORTHO05D007358 5.2e-18 95.9 213 35.7
Gohir.A08G154900 Gossypium hirsutum HOM05D000070 ORTHO05D007358 5.2e-18 95.9 274 31.8
PGR142G2226 Punica granatum HOM05D000070 ORTHO05D007358 5.2e-18 95.9 272 32.7
Gohir.D08G175400 Gossypium hirsutum HOM05D000070 ORTHO05D007358 6.8e-18 95.5 275 32.4
TPR.G22681 Trifolium pratense HOM05D000070 ORTHO05D007358 2.0e-17 94.0 223 34.5
Medtr7g089040 Medicago truncatula HOM05D000070 ORTHO05D007358 2.6e-17 93.6 227 34.8
Hund19077 Selenicereus undatus HOM05D000070 ORTHO05D007358 2.6e-17 93.6 330 27.9
ClCG09G015840 Citrullus lanatus HOM05D000070 ORTHO05D007358 5.8e-17 92.4 267 31.5
Gorai.004G183300 Gossypium raimondii HOM05D000070 ORTHO05D007358 7.6e-17 92.0 275 31.6
FAN05G1937 Fragaria x ananassa HOM05D000070 ORTHO05D007358 1.3e-16 91.3 207 33.3
MELO3C018435.2 Cucumis melo HOM05D000070 ORTHO05D007358 2.2e-16 90.5 253 31.6
Lsat_1_v5_gn_7_62300 Lactuca sativa HOM05D000070 ORTHO05D007358 2.2e-16 90.5 311 32.2
MD09G1206200 Malus domestica HOM05D000070 ORTHO05D007358 2.2e-16 90.5 227 33.0
CsaV3_7G008770 Cucumis sativus L. HOM05D000070 ORTHO05D007358 4.9e-16 89.4 277 30.7
Zm00001eb169190 Zea mays HOM05D000070 ORTHO05D007358 4.9e-16 89.4 269 31.6
HPP92_005675 Vanilla planifolia HOM05D000070 ORTHO05D007358 6.4e-16 89.0 244 32.8
FAN09G2492 Fragaria x ananassa HOM05D000070 ORTHO05D007358 1.1e-15 88.2 267 31.1
Sp5g05880 Schrenkiella parvula HOM05D000070 ORTHO05D007358 1.1e-15 88.2 316 30.7
Medtr7g088830 Medicago truncatula HOM05D000070 ORTHO05D007358 1.4e-15 87.8 251 31.9
Glyma.03G123500 Glycine max HOM05D000070 ORTHO05D007358 2.4e-15 87.0 317 30.6
FAN14G4524 Fragaria x ananassa HOM05D000070 ORTHO05D007358 3.2e-15 86.7 238 30.7
PSO339G6190 Papaver somniferum HOM05D000070 ORTHO05D007358 3.2e-15 86.7 184 33.7
Phvul.001G119600 Phaseolus vulgaris HOM05D000070 ORTHO05D007358 3.2e-15 86.7 316 30.1
C08p31920 Brassica napus HOM05D000070 ORTHO05D007358 4.2e-15 86.3 285 30.5
FvH4_6g32040 Fragaria vesca HOM05D000070 ORTHO05D007358 4.2e-15 86.3 238 31.1
FAN02G0829 Fragaria x ananassa HOM05D000070 ORTHO05D007358 4.2e-15 86.3 238 33.6
Carub.0005s2343 Capsella rubella HOM05D000070 ORTHO05D007358 5.4e-15 85.9 230 34.3
Eucgr.K01669 Eucalyptus grandis HOM05D000070 ORTHO05D007358 5.4e-15 85.9 272 30.9
THA.LOC104824382 Tarenaya hassleriana HOM05D000070 ORTHO05D007358 5.4e-15 85.9 232 35.8
BcaC07g39973 Brassica carinata HOM05D000070 ORTHO05D007358 9.3e-15 85.1 310 32.3
BolC8t50809H Brassica oleracea HOM05D000070 ORTHO05D007358 9.3e-15 85.1 310 32.3
Cc06_g20150 Coffea canephora HOM05D000070 ORTHO05D007358 9.3e-15 85.1 242 31.4
AL5G38060 Arabidopsis lyrata HOM05D000070 ORTHO05D007358 1.2e-14 84.7 259 32.4
CARHR166810 Cardamine hirsuta HOM05D000070 ORTHO05D007358 1.6e-14 84.3 252 33.7
Sed0024109 Sechium edule HOM05D000070 ORTHO05D007358 1.6e-14 84.3 310 27.4
Haze_20262 Corylus avellana HOM05D000070 ORTHO05D007358 4.6e-14 82.8 157 38.9
VMungo1383G0846 Vigna mungo HOM05D000070 ORTHO05D007358 7.8e-14 82.0 316 29.7
PSO384G4037 Papaver somniferum HOM05D000070 ORTHO05D007358 1.3e-13 81.3 249 28.1
Sc19g0008040 Simmondsia chinensis HOM05D000070 ORTHO05D007358 2.3e-13 80.5 157 38.9
BcaC07g40128 Brassica carinata HOM05D000070 ORTHO05D007358 3.0e-13 80.1 248 32.7
Aa31LG10G14780 Aethionema arabicum HOM05D000070 ORTHO05D007358 5.1e-13 79.3 295 29.2
Thhalv10005761m.g Eutrema salsugineum HOM05D000070 ORTHO05D007358 6.6e-13 79.0 244 32.0
AUR62030281 Chenopodium quinoa HOM05D000070 ORTHO05D007358 1.9e-12 77.4 172 30.2
Nn7g36932 Nelumbo nucifera HOM05D000070 ORTHO05D007358 2.5e-12 77.0 166 36.7
AT3G56690 Arabidopsis thaliana HOM05D000070 ORTHO05D007358 3.3e-12 76.6 243 30.9
Thhalv10006379m.g Eutrema salsugineum HOM05D000070 ORTHO05D007358 7.3e-12 75.5 241 31.5
SalBow6G2908 Salvia bowleyana HOM05D000070 ORTHO05D007358 7.3e-12 75.5 281 30.6
Lj1C1085G1 Lonicera japonica HOM05D000070 ORTHO05D007358 1.6e-11 74.3 250 30.4
AUR62043208 Chenopodium quinoa HOM05D000070 ORTHO05D007358 3.6e-11 73.2 237 27.4
Hma1.2p1_1423F.1_g282610 Hydrangea macrophylla HOM05D000070 ORTHO05D007358 1.1e-10 71.6 159 36.5
HanXRQChr13g0406801 Helianthus annuus HOM05D000070 ORTHO05D007358 1.4e-10 71.2 308 28.6
Haze_05085 Corylus avellana HOM05D000070 ORTHO05D007358 1.8e-10 70.9 171 36.8
RcHm_v2.0_Chr2g0139701 Rosa chinensis HOM05D000070 ORTHO05D007358 6.9e-10 68.9 174 35.1
Atru.chr12.1645 Acer truncatum HOM05D000070 ORTHO05D007358 1.2e-09 68.2 238 31.9
AUR62018382 Chenopodium quinoa HOM05D000070 ORTHO05D007358 2.6e-09 67.0 172 30.2
unitig_21.g20681 Utricularia gibba HOM05D000070 ORTHO05D007358 4.2e-07 59.7 252 28.2
HPP92_005653 Vanilla planifolia HOM05D000070 ORTHO05D007358 4.2e-07 59.7 167 33.5
Mapoly0026s0037 Marchantia polymorpha HOM05D000070 ORTHO05D007358 7.1e-07 58.9 137 29.2
Sed0007179 Sechium edule HOM05D000070 ORTHO05D007358 1.2e-06 58.2 138 33.3
Pp3c6_25280 Physcomitrium patens HOM05D000070 ORTHO05D007358 4.6e-06 56.2 211 26.5


User provided reference genes

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