Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1096G036 Amborella trichopoda HOM05D009639 ORTHO05D010690 0.0e+00 1651.0 825 100.0
Nn7g37150 Nelumbo nucifera HOM05D009639 ORTHO05D010690 6.9e-34 150.2 532 28.6
Aqoxy1G01630 Aquilegia oxysepala HOM05D028564 ORTHO05D010690 2.5e-31 141.7 217 41.0
Aqoxy5G04141 Aquilegia oxysepala HOM05D009639 ORTHO05D010690 5.1e-29 134.0 215 40.0
TAR623G0143 Trochodendron aralioides HOM05D009639 ORTHO05D010690 3.3e-28 131.3 530 27.7
Atru.chr12.1203 Acer truncatum HOM05D009639 ORTHO05D006184 3.3e-20 104.8 218 34.4
Lj3g0012055 Lotus japonicus HOM05D009639 ORTHO05D010690 1.7e-19 102.4 140 44.3
Lalb_Chr18g0048201 Lupinus albus HOM05D009639 ORTHO05D010690 4.8e-19 100.9 149 39.6
VMungo1080G0201 Vigna mungo HOM05D009639 ORTHO05D010690 1.1e-18 99.8 146 39.7
Glyma.04G124900 Glycine max HOM05D009639 ORTHO05D010690 1.4e-18 99.4 147 40.8
SEGI_28746 Sequoiadendron giganteum HOM05D003060 ORTHO05D001716 3.1e-18 98.2 288 28.5
Glyma.06G313400 Glycine max HOM05D009639 ORTHO05D010690 4.1e-18 97.8 175 37.7
Ciclev10002267m.g Citrus clementina HOM05D009639 ORTHO05D010690 6.9e-18 97.1 189 36.0
Medtr3g010860 Medicago truncatula HOM05D009639 ORTHO05D010690 5.9e-17 94.0 146 40.4
Phvul.005G012500 Phaseolus vulgaris HOM05D009639 ORTHO05D010690 1.0e-16 93.2 147 36.1
Psat4g150240 Pisum sativum HOM05D009639 ORTHO05D010690 1.0e-16 93.2 140 40.0
QL04p023061 Quercus lobata HOM05D009639 ORTHO05D010690 1.0e-16 93.2 102 53.9
Cfa010987 Carpinus fangiana HOM05D009639 ORTHO05D010690 3.8e-16 91.3 150 42.0
Ca_25852_v3 Cicer arietinum L. HOM05D009639 ORTHO05D010690 3.8e-16 91.3 70 58.6
Psat5g223640 Pisum sativum HOM05D009639 ORTHO05D010690 3.8e-16 91.3 140 38.6
CiPaw.13G018700 Carya illinoinensis HOM05D009639 ORTHO05D010690 1.4e-15 89.4 73 60.3
Manes.11G010500 Manihot esculenta HOM05D009639 ORTHO05D010690 1.4e-15 89.4 149 38.9
TPR.G24389 Trifolium pratense HOM05D009639 ORTHO05D010690 2.5e-15 88.6 145 35.9
Haze_02948 Corylus avellana HOM05D009639 ORTHO05D010690 2.1e-14 85.5 74 59.5
Potri.003G188600 Populus trichocarpa HOM05D009639 ORTHO05D010690 3.6e-14 84.7 77 58.4
SEGI_40933 Sequoiadendron giganteum HOM05D003060 ORTHO05D001716 1.0e-13 83.2 525 25.0
Sabra03G0137900 Salix brachista HOM05D009639 ORTHO05D010690 3.0e-13 81.6 146 39.0
Oeu010912.1 Olea europaea HOM05D003060 ORTHO05D001716 7.4e-12 77.0 234 30.3
Lj9A123G17 Lonicera japonica HOM05D003060 ORTHO05D001716 2.2e-11 75.5 275 27.3
MBI19_g13125_MAGBIO Magnolia biondii HOM05D003060 ORTHO05D001716 2.8e-11 75.1 180 35.6
Duzib211G0658 Durio zibethinus HOM05D003060 ORTHO05D001716 3.7e-11 74.7 144 36.1
Lj9C129G1 Lonicera japonica HOM05D003060 ORTHO05D001716 6.3e-11 73.9 126 34.9
Aa31LG5G15950 Aethionema arabicum HOM05D003060 ORTHO05D001716 1.1e-10 73.2 215 31.6
Oeu012112.1 Olea europaea HOM05D003060 ORTHO05D001716 1.4e-10 72.8 288 27.8
Aqoxy2G03022 Aquilegia oxysepala HOM05D003060 ORTHO05D001716 2.4e-10 72.0 126 33.3
Actinidia19783 Actinidia chinensis HOM05D003060 ORTHO05D001716 5.3e-10 70.9 217 33.6
Duzib177G0733 Durio zibethinus HOM05D003060 ORTHO05D001716 1.2e-09 69.7 160 34.4
TAR633G1311 Trochodendron aralioides HOM05D003060 ORTHO05D001716 1.2e-09 69.7 191 29.8
Gohir.D05G274200 Gossypium hirsutum HOM05D003060 ORTHO05D001716 2.6e-09 68.6 152 34.2
SalBow3G3371 Salvia bowleyana HOM05D003060 ORTHO05D001716 2.6e-09 68.6 135 35.6
Gohir.A05G272000 Gossypium hirsutum HOM05D003060 ORTHO05D001716 3.4e-09 68.2 222 28.8
arahy.Tifrunner.gnm1.ann1.LGT5H6 Arachis hypogaea HOM05D003060 ORTHO05D001716 4.5e-09 67.8 203 29.6
arahy.Tifrunner.gnm1.ann1.U2HTAJ Arachis hypogaea HOM05D003060 ORTHO05D001716 4.5e-09 67.8 203 29.6
Glyma.19G234300 Glycine max HOM05D003060 ORTHO05D001716 4.5e-09 67.8 108 38.0
Gorai.009G287300 Gossypium raimondii HOM05D003060 ORTHO05D001716 4.5e-09 67.8 209 28.2
MSTRG.27986 Avicennia marina HOM05D003060 ORTHO05D001716 5.9e-09 67.4 261 26.4
CARHR079770 Cardamine hirsuta HOM05D003060 ORTHO05D001716 5.9e-09 67.4 260 29.2
unitig_899.g15593 Utricularia gibba HOM05D003060 ORTHO05D001716 5.9e-09 67.4 104 41.3
MELO3C004230.2 Cucumis melo HOM05D003060 ORTHO05D001716 7.7e-09 67.0 154 32.5
Eucgr.H04503 Eucalyptus grandis HOM05D003060 ORTHO05D001716 1.0e-08 66.6 90 45.6
HPP92_016933 Vanilla planifolia HOM05D003060 ORTHO05D001716 1.0e-08 66.6 247 27.1
Atru.chr12.1201 Acer truncatum HOM05D009639 ORTHO05D010690 1.3e-08 66.2 218 27.1
ClCG02G015530 Citrullus lanatus HOM05D003060 ORTHO05D001716 1.3e-08 66.2 104 36.5
Thecc.08G198500 Theobroma cacao HOM05D003060 ORTHO05D001716 1.3e-08 66.2 151 34.4
unitig_746.g26861 Utricularia gibba HOM05D003060 ORTHO05D001716 1.3e-08 66.2 85 43.5
vmacro08136 Vaccinium macrocarpon HOM05D003060 ORTHO05D001716 1.3e-08 66.2 216 31.0
GSVIVG01031118001 Vitis vinifera HOM05D003060 ORTHO05D001716 1.3e-08 66.2 146 35.6
Glyma.10G152700 Glycine max HOM05D003060 ORTHO05D001716 1.7e-08 65.9 95 38.9
HanXRQChr14g0433331 Helianthus annuus HOM05D003060 ORTHO05D001716 1.7e-08 65.9 96 40.6
Nitab4.5_0004754g0020 Nicotiana tabacum HOM05D003060 ORTHO05D001716 1.7e-08 65.9 371 23.7
FAN09G4310 Fragaria x ananassa HOM05D003060 ORTHO05D001716 2.2e-08 65.5 87 40.2
Duzib116G0105 Durio zibethinus HOM05D003060 ORTHO05D001716 2.9e-08 65.1 224 28.6
Glyma.20G235700 Glycine max HOM05D003060 ORTHO05D001716 2.9e-08 65.1 95 37.9
Nitab4.5_0002344g0090 Nicotiana tabacum HOM05D003060 ORTHO05D001716 3.8e-08 64.7 371 23.5
Cc00_g10500 Coffea canephora HOM05D003060 ORTHO05D001716 5.0e-08 64.3 177 33.9
Migut.N01988 Erythranthe guttata HOM05D003060 ORTHO05D001716 5.0e-08 64.3 277 25.6
Lalb_Chr15g0077301 Lupinus albus HOM05D003060 ORTHO05D001716 5.0e-08 64.3 155 32.9
Nn3g21411 Nelumbo nucifera HOM05D003060 ORTHO05D001716 5.0e-08 64.3 87 40.2
Potri.005G026800 Populus trichocarpa HOM05D003060 ORTHO05D001716 5.0e-08 64.3 139 33.1
QL03p012691 Quercus lobata HOM05D003060 ORTHO05D001716 5.0e-08 64.3 235 27.7
Lj1g0012568 Lotus japonicus HOM05D003060 ORTHO05D001716 6.5e-08 63.9 141 34.8
Lalb_Chr18g0045701 Lupinus albus HOM05D003060 ORTHO05D001716 6.5e-08 63.9 143 32.9
DCAR_022153 Daucus carota HOM05D003060 ORTHO05D001716 8.5e-08 63.5 99 36.4
Lj6A674G26 Lonicera japonica HOM05D003060 ORTHO05D001716 8.5e-08 63.5 209 31.6
THA.LOC104802799 Tarenaya hassleriana HOM05D003060 ORTHO05D001716 8.5e-08 63.5 287 25.1
TAR636G0574 Trochodendron aralioides HOM05D003060 ORTHO05D001716 8.5e-08 63.5 529 21.7
Actinidia24646 Actinidia chinensis HOM05D003060 ORTHO05D001716 1.1e-07 63.2 92 40.2
CsaV3_2G006550 Cucumis sativus L. HOM05D003060 ORTHO05D001716 1.1e-07 63.2 102 35.3
PSO063G5863 Papaver somniferum HOM05D003060 ORTHO05D001716 1.1e-07 63.2 102 38.2
PSO782G3442 Papaver somniferum HOM05D003060 ORTHO05D001716 1.1e-07 63.2 102 38.2
Prupe.6G322700 Prunus persica HOM05D003060 ORTHO05D001716 1.1e-07 63.2 82 41.5
PGSC0003DMG402024702 Solanum tuberosum HOM05D003060 ORTHO05D001716 1.1e-07 63.2 179 29.6
VMungo0540G1887 Vigna mungo HOM05D003060 ORTHO05D001716 1.1e-07 63.2 183 30.1
MSTRG.20426 Avicennia marina HOM05D003060 ORTHO05D001716 1.4e-07 62.8 172 29.7
Cfa006614 Carpinus fangiana HOM05D003060 ORTHO05D001716 1.4e-07 62.8 99 37.4
Haze_04161 Corylus avellana HOM05D003060 ORTHO05D001716 1.4e-07 62.8 99 37.4
TWI36G0905 Tripterygium wilfordii HOM05D003060 ORTHO05D001716 1.4e-07 62.8 138 35.5
Actinidia19785 Actinidia chinensis HOM05D003060 ORTHO05D001716 1.9e-07 62.4 97 40.2
Psat0s545g0040 Pisum sativum HOM05D003060 ORTHO05D001716 1.9e-07 62.4 89 39.3
Sabra13G0021300 Salix brachista HOM05D003060 ORTHO05D001716 1.9e-07 62.4 142 28.9
Sc09g0003030 Simmondsia chinensis HOM05D003060 ORTHO05D001716 1.9e-07 62.4 205 29.8
TPR.G33216 Trifolium pratense HOM05D003060 ORTHO05D001716 1.9e-07 62.4 89 39.3
CANSAT56G3803 Cannabis sativa HOM05D009639 ORTHO05D010690 2.5e-07 62.0 85 38.8
Dinv40310 Davidia involucrata HOM05D003060 ORTHO05D001716 2.5e-07 62.0 97 38.1
SalBow7G2475 Salvia bowleyana HOM05D003060 ORTHO05D001716 2.5e-07 62.0 125 32.8
FvH4_6g06310 Fragaria vesca HOM05D003060 ORTHO05D001716 3.2e-07 61.6 87 39.1
FAN02G1847 Fragaria x ananassa HOM05D003060 ORTHO05D001716 3.2e-07 61.6 87 39.1
FAN05G5493 Fragaria x ananassa HOM05D003060 ORTHO05D001716 3.2e-07 61.6 87 39.1
FAN14G2973 Fragaria x ananassa HOM05D003060 ORTHO05D001716 3.2e-07 61.6 87 39.1
Potri.013G018700 Populus trichocarpa HOM05D003060 ORTHO05D001716 3.2e-07 61.6 138 29.0
Zm00001eb354250 Zea mays HOM05D003060 ORTHO05D001716 3.2e-07 61.6 93 36.6
COL.COLO4_05531 Corchorus olitorius HOM05D003060 ORTHO05D001716 4.2e-07 61.2 147 34.0
Thhalv10003560m.g Eutrema salsugineum HOM05D003060 ORTHO05D001716 4.2e-07 61.2 194 29.9
CDE08G1209 Ceratophyllum demersum HOM05D003060 ORTHO05D001716 5.5e-07 60.8 525 22.5
Sed0012843 Sechium edule HOM05D003060 ORTHO05D001716 5.5e-07 60.8 84 40.5
unitig_749.g13558 Utricularia gibba HOM05D003060 ORTHO05D001716 5.5e-07 60.8 111 35.1
Aa31LG11G9390 Aethionema arabicum HOM05D003060 ORTHO05D001716 7.2e-07 60.5 203 29.6
CANSAT54G0820 Cannabis sativa HOM05D003060 ORTHO05D001716 7.2e-07 60.5 132 32.6
CARHR186170 Cardamine hirsuta HOM05D003060 ORTHO05D001716 7.2e-07 60.5 147 32.7
CiPaw.08G163000 Carya illinoinensis HOM05D003060 ORTHO05D001716 7.2e-07 60.5 91 39.6
CDE02G1047 Ceratophyllum demersum HOM05D003060 ORTHO05D001716 7.2e-07 60.5 509 23.4
HanXRQChr11g0339461 Helianthus annuus HOM05D003060 ORTHO05D001716 7.2e-07 60.5 77 37.7
RcHm_v2.0_Chr3g0455351 Rosa chinensis HOM05D003060 ORTHO05D001716 7.2e-07 60.5 87 37.9
SEGI_14874 Sequoiadendron giganteum HOM05D000855 ORTHO05D001716 7.2e-07 60.5 97 39.2
TAR362G0619 Trochodendron aralioides HOM05D003060 ORTHO05D001716 7.2e-07 60.5 156 33.3
BraA09t36175Z Brassica rapa HOM05D003060 ORTHO05D001716 9.4e-07 60.1 142 31.7
Sopen01g042920 Solanum pennellii HOM05D003060 ORTHO05D001716 9.4e-07 60.1 155 31.6
Atru.chr2.14 Acer truncatum HOM05D003060 ORTHO05D001716 1.2e-06 59.7 204 27.9
Ca_05807_v3 Cicer arietinum L. HOM05D003060 ORTHO05D001716 1.2e-06 59.7 91 37.4
Solyc01g099360.3 Solanum lycopersicum HOM05D003060 ORTHO05D001716 1.2e-06 59.7 155 31.6
Haze_01221 Corylus avellana HOM05D003060 ORTHO05D001716 2.7e-06 58.5 184 31.5
Lj5g0001145 Lotus japonicus HOM05D003060 ORTHO05D001716 2.7e-06 58.5 94 35.1
vmacro19622 Vaccinium macrocarpon HOM05D003060 ORTHO05D001716 2.7e-06 58.5 93 37.6
A09p05370 Brassica napus HOM05D003060 ORTHO05D001716 3.6e-06 58.2 142 31.0
Rhsim05G0141600 Rhododendron simsii HOM05D003060 ORTHO05D001716 3.6e-06 58.2 83 39.8
CSS0017800 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D001716 4.7e-06 57.8 106 34.9
TWI12G1080 Tripterygium wilfordii HOM05D003060 ORTHO05D001716 4.7e-06 57.8 100 38.0
Sp2g20810 Schrenkiella parvula HOM05D003060 ORTHO05D001716 6.1e-06 57.4 172 30.2
AL6G39380 Arabidopsis lyrata HOM05D003060 ORTHO05D001716 8.0e-06 57.0 147 32.0
AT5G27650 Arabidopsis thaliana HOM05D003060 ORTHO05D001716 8.0e-06 57.0 147 32.0
Cpa.g.sc48.79 Carica papaya HOM05D003060 ORTHO05D001716 8.0e-06 57.0 177 28.8


User provided reference genes

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