Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1096G027 Amborella trichopoda HOM05D006084 ORTHO05D007449 2.6e-80 302.0 151 100.0
ATR0730G058 Amborella trichopoda HOM05D006084 ORTHO05D007449 3.3e-59 231.9 124 94.4
TAR371G1194 Trochodendron aralioides HOM05D006084 ORTHO05D007449 6.9e-49 197.6 124 76.6
Rhsim08G0053800 Rhododendron simsii HOM05D006084 ORTHO05D007449 3.8e-47 191.8 117 78.6
Dinv33481 Davidia involucrata HOM05D006084 ORTHO05D007449 6.5e-47 191.0 120 75.8
Atru.chr6.2220 Acer truncatum HOM05D006084 ORTHO05D007449 8.4e-47 190.7 124 75.0
Manes.17G116000 Manihot esculenta HOM05D006084 ORTHO05D007449 1.9e-46 189.5 118 78.0
QL02p076043 Quercus lobata HOM05D006084 ORTHO05D007449 4.2e-46 188.3 124 71.8
QL02p076078 Quercus lobata HOM05D006084 ORTHO05D007449 4.2e-46 188.3 124 71.8
Actinidia35746 Actinidia chinensis HOM05D006084 ORTHO05D007449 9.3e-46 187.2 118 77.1
Haze_14684 Corylus avellana HOM05D006084 ORTHO05D007449 2.1e-45 186.0 138 66.7
Aqoxy3G02941 Aquilegia oxysepala HOM05D006084 ORTHO05D007449 2.7e-45 185.7 120 75.8
CiPaw.03G039200 Carya illinoinensis HOM05D006084 ORTHO05D007449 6.0e-45 184.5 118 74.6
CDE08G0643 Ceratophyllum demersum HOM05D006084 ORTHO05D007449 6.0e-45 184.5 124 71.8
Prupe.3G286100 Prunus persica HOM05D006084 ORTHO05D007449 6.0e-45 184.5 117 73.5
Cfa007418 Carpinus fangiana HOM05D006084 ORTHO05D007449 1.8e-44 183.0 124 70.2
Eucgr.I01785 Eucalyptus grandis HOM05D006084 ORTHO05D007449 1.8e-44 183.0 124 70.2
PSO782G1469 Papaver somniferum HOM05D006084 ORTHO05D007449 1.8e-44 183.0 127 71.7
CSS0000489 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 2.3e-44 182.6 124 72.6
CSS0035017 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 2.3e-44 182.6 124 72.6
Sc03g0007970 Simmondsia chinensis HOM05D006084 ORTHO05D007449 3.0e-44 182.2 117 73.5
FvH4_6g50830 Fragaria vesca HOM05D006084 ORTHO05D007449 3.9e-44 181.8 121 71.1
FAN02G2714 Fragaria x ananassa HOM05D006084 ORTHO05D007449 3.9e-44 181.8 121 71.1
Ca_16579_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 6.7e-44 181.0 118 76.3
Hund02345 Selenicereus undatus HOM05D006084 ORTHO05D007449 6.7e-44 181.0 124 67.7
Potri.001G349500 Populus trichocarpa HOM05D006084 ORTHO05D007449 8.7e-44 180.6 124 71.8
FAN14G2625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 1.1e-43 180.3 121 70.2
Hma1.2p1_0846F.1_g227700 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 1.5e-43 179.9 117 72.6
PSO210G7688 Papaver somniferum HOM05D006084 ORTHO05D007449 1.9e-43 179.5 127 69.3
CAN.G206.22 Capsicum annuum HOM05D006084 ORTHO05D007449 2.5e-43 179.1 122 68.0
FAN05G5625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 2.5e-43 179.1 127 68.5
Gohir.A07G221200 Gossypium hirsutum HOM05D006084 ORTHO05D007449 7.4e-43 177.6 118 70.3
Medtr3g088470 Medicago truncatula HOM05D006084 ORTHO05D007449 9.6e-43 177.2 118 72.9
RcHm_v2.0_Chr2g0172221 Rosa chinensis HOM05D006084 ORTHO05D007449 9.6e-43 177.2 121 68.6
Lalb_Chr10g0093921 Lupinus albus HOM05D006084 ORTHO05D007449 2.1e-42 176.0 118 72.0
PSO566G0352 Papaver somniferum HOM05D006084 ORTHO05D007449 2.1e-42 176.0 127 69.3
HanXRQChr07g0198791 Helianthus annuus HOM05D006084 ORTHO05D007449 3.7e-42 175.3 123 69.1
Thecc.04G011100 Theobroma cacao HOM05D006084 ORTHO05D007449 3.7e-42 175.3 118 72.0
Sp6g29330 Schrenkiella parvula HOM05D006084 ORTHO05D007449 4.8e-42 174.9 124 68.5
Gohir.D07G227900 Gossypium hirsutum HOM05D006084 ORTHO05D007449 6.3e-42 174.5 118 70.3
Lj1g0023236 Lotus japonicus HOM05D006084 ORTHO05D007449 6.3e-42 174.5 120 70.8
MD17G1033600 Malus domestica HOM05D006084 ORTHO05D007449 8.2e-42 174.1 117 69.2
Sed0018290 Sechium edule HOM05D006084 ORTHO05D007449 8.2e-42 174.1 124 66.1
BcaNung03101 Brassica carinata HOM05D006084 ORTHO05D007449 1.1e-41 173.7 121 69.4
A02p02680 Brassica napus HOM05D006084 ORTHO05D007449 1.1e-41 173.7 124 68.5
BraA02t05237Z Brassica rapa HOM05D006084 ORTHO05D007449 1.1e-41 173.7 124 68.5
AL6G25480 Arabidopsis lyrata HOM05D006084 ORTHO05D007449 1.4e-41 173.3 124 69.4
GSVIVG01032459001 Vitis vinifera HOM05D006084 ORTHO05D007449 1.4e-41 173.3 117 72.6
BcaB01g05101 Brassica carinata HOM05D006084 ORTHO05D007449 1.8e-41 172.9 124 66.9
C03p07740 Brassica napus HOM05D006084 ORTHO05D007449 1.8e-41 172.9 124 66.9
BolC3t13274H Brassica oleracea HOM05D006084 ORTHO05D007449 1.8e-41 172.9 124 66.9
BraA03t10005Z Brassica rapa HOM05D006084 ORTHO05D007449 1.8e-41 172.9 124 66.9
A03p06720 Brassica napus HOM05D006084 ORTHO05D007449 2.4e-41 172.6 124 66.9
Glyma.04G247000 Glycine max HOM05D006084 ORTHO05D007449 3.1e-41 172.2 118 72.0
Glyma.06G115700 Glycine max HOM05D006084 ORTHO05D007449 3.1e-41 172.2 123 68.3
Carub.0006s1288 Capsella rubella HOM05D006084 ORTHO05D007449 4.1e-41 171.8 124 67.7
HanXRQChr14g0450361 Helianthus annuus HOM05D006084 ORTHO05D007449 4.1e-41 171.8 123 67.5
PGR142G2538 Punica granatum HOM05D006084 ORTHO05D007449 4.1e-41 171.8 115 71.3
CARHR198600 Cardamine hirsuta HOM05D006084 ORTHO05D007449 6.9e-41 171.0 124 66.9
PGSC0003DMG400000490 Solanum tuberosum HOM05D006084 ORTHO05D007449 6.9e-41 171.0 119 67.2
THA.LOC104821076 Tarenaya hassleriana HOM05D006084 ORTHO05D007449 9.0e-41 170.6 124 67.7
TPR.G13476 Trifolium pratense HOM05D006084 ORTHO05D007449 9.0e-41 170.6 118 70.3
AT5G14710 Arabidopsis thaliana HOM05D006084 ORTHO05D007449 1.2e-40 170.2 124 66.9
Oeu004718.1 Olea europaea HOM05D006084 ORTHO05D007449 1.2e-40 170.2 118 72.0
Sopen02g031550 Solanum pennellii HOM05D006084 ORTHO05D007449 1.2e-40 170.2 119 67.2
COL.COLO4_28991 Corchorus olitorius HOM05D006084 ORTHO05D007449 1.5e-40 169.9 134 65.7
Thhalv10015025m.g Eutrema salsugineum HOM05D006084 ORTHO05D007449 2.0e-40 169.5 124 66.1
Cc07_g02120 Coffea canephora HOM05D006084 ORTHO05D007449 3.4e-40 168.7 124 66.9
Phvul.009G127800 Phaseolus vulgaris HOM05D006084 ORTHO05D007449 3.4e-40 168.7 118 70.3
BcaC03g13452 Brassica carinata HOM05D006084 ORTHO05D007449 4.5e-40 168.3 124 66.1
C02p07250 Brassica napus HOM05D006084 ORTHO05D007449 4.5e-40 168.3 124 66.1
BolC2t06657H Brassica oleracea HOM05D006084 ORTHO05D007449 4.5e-40 168.3 124 66.1
CsaV3_5G027340 Cucumis sativus L. HOM05D006084 ORTHO05D007449 5.9e-40 167.9 124 62.9
BcaC04g19017 Brassica carinata HOM05D006084 ORTHO05D007449 7.6e-40 167.5 111 72.1
MELO3C005689.2 Cucumis melo HOM05D006084 ORTHO05D007449 1.0e-39 167.2 124 63.7
MSTRG.3166 Avicennia marina HOM05D006084 ORTHO05D007449 2.2e-39 166.0 119 65.5
ECA238G3069 Erigeron canadensis HOM05D006084 ORTHO05D007449 3.8e-39 165.2 123 65.0
arahy.Tifrunner.gnm1.ann1.DMWP0X Arachis hypogaea HOM05D006084 ORTHO05D007449 6.5e-39 164.5 118 71.2
CANSAT64G0964 Cannabis sativa HOM05D006084 ORTHO05D007449 6.5e-39 164.5 117 65.8
arahy.Tifrunner.gnm1.ann1.2LS7ZQ Arachis hypogaea HOM05D006084 ORTHO05D007449 8.5e-39 164.1 118 71.2
Aa31LG11G14750 Aethionema arabicum HOM05D006084 ORTHO05D007449 1.1e-38 163.7 124 64.5
Hma1.2p1_0056F.1_g031653 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 1.1e-38 163.7 105 74.3
TWI12G0619 Tripterygium wilfordii HOM05D006084 ORTHO05D007449 1.4e-38 163.3 117 67.5
arahy.Tifrunner.gnm1.ann1.48HX9C Arachis hypogaea HOM05D006084 ORTHO05D007449 3.2e-38 162.2 118 70.3
Hma1.2p1_1415F.1_g281960 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 7.2e-38 161.0 104 74.0
Migut.H00108 Erythranthe guttata HOM05D006084 ORTHO05D007449 2.1e-37 159.5 118 66.9
FAN09G3162 Fragaria x ananassa HOM05D006084 ORTHO05D007449 2.7e-37 159.1 105 72.4
Gorai.001G262800 Gossypium raimondii HOM05D006084 ORTHO05D007449 4.6e-37 158.3 101 74.3
unitig_746.g26552 Utricularia gibba HOM05D006084 ORTHO05D007449 6.1e-37 157.9 115 67.0
HPP92_022049 Vanilla planifolia HOM05D006084 ORTHO05D007449 6.1e-37 157.9 117 65.0
Os10g0395500 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 7.9e-37 157.5 120 60.0
MBI19_g17406_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 2.3e-36 156.0 128 63.3
Peaxi162Scf00129g01228 Petunia axillaris HOM05D006084 ORTHO05D007449 3.0e-36 155.6 104 70.2
C09p62430 Brassica napus HOM05D006084 ORTHO05D007449 6.7e-36 154.5 101 72.3
ClCG09G019010 Citrullus lanatus HOM05D006084 ORTHO05D007449 6.7e-36 154.5 146 52.7
SGA_v2.0_scaffold2848G54225 Striga asiatica HOM05D006084 ORTHO05D007449 8.7e-36 154.1 118 64.4
arahy.Tifrunner.gnm1.ann1.GQ5XJ3 Arachis hypogaea HOM05D006084 ORTHO05D007449 2.5e-35 152.5 135 60.0
Zm00001eb048120 Zea mays HOM05D006084 ORTHO05D007449 2.5e-35 152.5 117 62.4
EL10Ac3g07214 Beta vulgaris HOM05D006084 ORTHO05D007449 5.7e-35 151.4 112 64.3
MBI19_g07248_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 7.4e-35 151.0 130 62.3
BolC9t59081H Brassica oleracea HOM05D006084 ORTHO05D007449 1.3e-34 150.2 101 71.3
ClCG00G003490 Citrullus lanatus HOM05D006084 ORTHO05D007449 1.3e-34 150.2 145 52.4
Nn3g16859 Nelumbo nucifera HOM05D006084 ORTHO05D007449 1.4e-33 146.7 118 65.3
Sabra16G0228900 Salix brachista HOM05D006084 ORTHO05D007449 7.7e-32 141.0 216 41.2
AUR62031990 Chenopodium quinoa HOM05D006084 ORTHO05D007449 2.2e-31 139.4 124 56.5
Lsat_1_v5_gn_2_91880 Lactuca sativa HOM05D006084 ORTHO05D007449 2.2e-31 139.4 123 58.5
Pp3c26_1260 Physcomitrium patens HOM05D006084 ORTHO05D007449 5.0e-31 138.3 126 51.6
Mapoly0005s0179 Marchantia polymorpha HOM05D006084 ORTHO05D007449 1.1e-30 137.1 117 53.8
Duzib264G1216 Durio zibethinus HOM05D006084 ORTHO05D007449 9.4e-30 134.0 83 73.5
SHI16396 Sapria himalayana HOM05D006084 ORTHO05D007449 1.2e-29 133.7 98 62.2
Cpa.g.c30698.2 Carica papaya HOM05D006084 ORTHO05D007449 7.9e-29 131.0 87 75.9
SMO367G0706 Selaginella moellendorffii HOM05D006084 ORTHO05D007449 3.9e-28 128.6 127 53.5
DCAR_011237 Daucus carota HOM05D006084 ORTHO05D007449 5.1e-28 128.3 121 57.9
Nitab4.5_0007141g0020 Nicotiana tabacum HOM05D006084 ORTHO05D007449 3.3e-27 125.6 106 61.3
Solyc02g086780.4 Solanum lycopersicum HOM05D006084 ORTHO05D007449 1.4e-25 120.2 80 73.8
Ciclev10017692m.g Citrus clementina HOM05D006084 ORTHO05D007449 1.2e-24 117.1 68 77.9
AUR62030334 Chenopodium quinoa HOM05D006084 ORTHO05D007449 3.8e-23 112.1 74 67.6
Nitab4.5_0006281g0070 Nicotiana tabacum HOM05D006084 ORTHO05D007449 4.2e-22 108.6 72 73.6
Ca_03224_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 7.2e-22 107.8 68 73.5
CBR_g5628 Chara braunii HOM05D006084 ORTHO05D007449 6.1e-21 104.8 121 46.3
AagrBONN_evm.TU.Sc2ySwM_228.3157 Anthoceros agrestis HOM05D006084 ORTHO05D007449 8.8e-20 100.9 79 54.4
BraA10t44460Z Brassica rapa HOM05D006084 ORTHO05D007449 8.8e-20 100.9 90 58.9
arahy.Tifrunner.gnm1.ann1.2H702Y Arachis hypogaea HOM05D006084 ORTHO05D007449 1.8e-17 93.2 61 75.4
MELO3C033557.2 Cucumis melo HOM05D006084 ORTHO05D007449 2.6e-16 89.4 94 51.1
Os01g0339600 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 7.7e-16 87.8 70 62.9
Cre13.g571000 Chlamydomonas reinhardtii HOM05D006084 ORTHO05D007449 1.7e-15 86.7 117 36.8
Dinv35076 Davidia involucrata HOM05D006084 ORTHO05D007449 4.0e-12 75.5 51 64.7
SEGI_25092 Sequoiadendron giganteum HOM05D006084 ORTHO05D007449 4.0e-12 75.5 62 54.8
A10p23960 Brassica napus HOM05D006084 ORTHO05D007449 7.7e-08 61.2 130 35.4
MCO07G269 Micromonas commoda HOM05D006084 ORTHO05D007449 2.2e-07 59.7 109 35.8


User provided reference genes

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