Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1096G015 Amborella trichopoda HOM05D005859 ORTHO05D007576 1.5e-36 155.6 74 100.0
ATR0697G154 Amborella trichopoda HOM05D005859 ORTHO05D007576 8.1e-19 96.7 54 83.3
SalBow1G3786 Salvia bowleyana HOM05D005859 ORTHO05D007576 1.9e-15 85.5 54 70.4
MSTRG.12122 Avicennia marina HOM05D005859 ORTHO05D007576 9.3e-15 83.2 56 66.1
QL12p026076 Quercus lobata HOM05D005859 ORTHO05D007576 1.2e-14 82.8 56 62.5
Cfa013324 Carpinus fangiana HOM05D005859 ORTHO05D007576 1.6e-14 82.4 54 64.8
Haze_21816 Corylus avellana HOM05D005859 ORTHO05D007576 1.6e-14 82.4 54 64.8
PGR042G0112 Punica granatum HOM05D005859 ORTHO05D007576 1.6e-14 82.4 56 62.5
CiPaw.07G208600 Carya illinoinensis HOM05D005859 ORTHO05D007576 2.1e-14 82.0 56 60.7
Psat5g022960 Pisum sativum HOM05D005859 ORTHO05D007576 2.1e-14 82.0 54 64.8
TWI63G1176 Tripterygium wilfordii HOM05D005859 ORTHO05D007576 2.1e-14 82.0 54 63.0
Atru.chr7.2673 Acer truncatum HOM05D005859 ORTHO05D007576 2.7e-14 81.6 54 64.8
Lalb_Chr11g0064301 Lupinus albus HOM05D005859 ORTHO05D007576 2.7e-14 81.6 54 63.0
Medtr3g109360 Medicago truncatula HOM05D005859 ORTHO05D007576 2.7e-14 81.6 54 64.8
Ciclev10009277m.g Citrus clementina HOM05D005859 ORTHO05D007576 3.5e-14 81.3 54 63.0
Lj1g0020437 Lotus japonicus HOM05D005859 ORTHO05D007576 3.5e-14 81.3 56 60.7
Sabra18G0001700 Salix brachista HOM05D005859 ORTHO05D007576 3.5e-14 81.3 56 62.5
Sabra18G0009500 Salix brachista HOM05D005859 ORTHO05D007576 3.5e-14 81.3 56 62.5
Sc10g0009100 Simmondsia chinensis HOM05D005859 ORTHO05D007576 4.6e-14 80.9 54 64.8
TPR.G1368 Trifolium pratense HOM05D005859 ORTHO05D007576 4.6e-14 80.9 54 64.8
Ca_15630_v3 Cicer arietinum L. HOM05D005859 ORTHO05D007576 6.0e-14 80.5 54 64.8
Eucgr.A02021 Eucalyptus grandis HOM05D005859 ORTHO05D007576 6.0e-14 80.5 56 60.7
RcHm_v2.0_Chr6g0305541 Rosa chinensis HOM05D005859 ORTHO05D007576 6.0e-14 80.5 60 58.3
COL.COLO4_34684 Corchorus olitorius HOM05D005859 ORTHO05D007576 7.9e-14 80.1 54 64.8
Sabra06G0214800 Salix brachista HOM05D005859 ORTHO05D007576 7.9e-14 80.1 54 63.0
Thecc.04G293600 Theobroma cacao HOM05D005859 ORTHO05D007576 7.9e-14 80.1 54 63.0
Migut.A01131 Erythranthe guttata HOM05D005859 ORTHO05D007576 1.0e-13 79.7 54 64.8
Potri.018G003900 Populus trichocarpa HOM05D005859 ORTHO05D007576 1.0e-13 79.7 54 64.8
CSS0019957 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 1.3e-13 79.3 54 63.0
Gohir.A09G063900 Gossypium hirsutum HOM05D005859 ORTHO05D007576 1.3e-13 79.3 54 63.0
Prupe.1G454800 Prunus persica HOM05D005859 ORTHO05D007576 1.3e-13 79.3 58 58.6
Aqoxy7G02813 Aquilegia oxysepala HOM05D005859 ORTHO05D007576 1.8e-13 79.0 56 62.5
FvH4_2g36340 Fragaria vesca HOM05D005859 ORTHO05D007576 1.8e-13 79.0 60 56.7
FAN15G0047 Fragaria x ananassa HOM05D005859 ORTHO05D007576 1.8e-13 79.0 60 56.7
Peaxi162Scf00149g00014 Petunia axillaris HOM05D005859 ORTHO05D007576 1.8e-13 79.0 54 63.0
Cc09_g05860 Coffea canephora HOM05D005859 ORTHO05D007576 2.3e-13 78.6 56 58.9
HanXRQChr09g0275211 Helianthus annuus HOM05D005859 ORTHO05D007576 2.3e-13 78.6 50 66.0
Nitab4.5_0006282g0050 Nicotiana tabacum HOM05D005859 ORTHO05D007576 2.3e-13 78.6 54 61.1
SEGI_16955 Sequoiadendron giganteum HOM05D005859 ORTHO05D007576 2.3e-13 78.6 56 58.9
THA.LOC104814931 Tarenaya hassleriana HOM05D005859 ORTHO05D007576 2.3e-13 78.6 54 61.1
CSS0020153 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 3.0e-13 78.2 54 61.1
CAN.G149.19 Capsicum annuum HOM05D005859 ORTHO05D007576 3.0e-13 78.2 54 61.1
FAN20G1422 Fragaria x ananassa HOM05D005859 ORTHO05D007576 3.0e-13 78.2 60 55.0
CSS0049229 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 3.9e-13 77.8 54 61.1
ClCG08G012440 Citrullus lanatus HOM05D005859 ORTHO05D007576 3.9e-13 77.8 56 60.7
MELO3C011163.2 Cucumis melo HOM05D005859 ORTHO05D007576 3.9e-13 77.8 56 60.7
CsaV3_2G031130 Cucumis sativus L. HOM05D005859 ORTHO05D007576 3.9e-13 77.8 56 60.7
HanXRQChr07g0193381 Helianthus annuus HOM05D005859 ORTHO05D007576 3.9e-13 77.8 50 64.0
Manes.08G049200 Manihot esculenta HOM05D005859 ORTHO05D007576 3.9e-13 77.8 54 61.1
Nn2g12765 Nelumbo nucifera HOM05D005859 ORTHO05D007576 3.9e-13 77.8 54 61.1
Duzib151G0446 Durio zibethinus HOM05D005859 ORTHO05D007576 5.1e-13 77.4 56 58.9
Duzib151G0554 Durio zibethinus HOM05D005859 ORTHO05D007576 5.1e-13 77.4 56 58.9
Gohir.D09G062800 Gossypium hirsutum HOM05D005859 ORTHO05D007576 5.1e-13 77.4 54 63.0
Gorai.006G077600 Gossypium raimondii HOM05D005859 ORTHO05D007576 5.1e-13 77.4 54 63.0
Actinidia22411 Actinidia chinensis HOM05D005859 ORTHO05D007576 6.7e-13 77.0 56 58.9
CSS0043283 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 6.7e-13 77.0 54 59.3
MD08G1121000 Malus domestica HOM05D005859 ORTHO05D007576 6.7e-13 77.0 58 56.9
Os06g0236900 Oryza sativa ssp. japonica HOM05D005859 ORTHO05D007576 6.7e-13 77.0 52 63.5
Phvul.009G104500 Phaseolus vulgaris HOM05D005859 ORTHO05D007576 6.7e-13 77.0 54 61.1
TAR625G0738 Trochodendron aralioides HOM05D005859 ORTHO05D007576 6.7e-13 77.0 56 58.9
Aa31LG11G4050 Aethionema arabicum HOM05D005859 ORTHO05D007576 8.7e-13 76.6 54 59.3
Dinv07263 Davidia involucrata HOM05D005859 ORTHO05D007576 8.7e-13 76.6 50 64.0
Glyma.04G078700 Glycine max HOM05D005859 ORTHO05D007576 8.7e-13 76.6 54 59.3
Lsat_1_v5_gn_5_41801 Lactuca sativa HOM05D005859 ORTHO05D007576 8.7e-13 76.6 50 64.0
Potri.006G277100 Populus trichocarpa HOM05D005859 ORTHO05D007576 8.7e-13 76.6 54 61.1
Sed0013908 Sechium edule HOM05D005859 ORTHO05D007576 8.7e-13 76.6 56 60.7
VMungo1309G0784 Vigna mungo HOM05D005859 ORTHO05D007576 8.7e-13 76.6 54 59.3
EL10Ac5g12246 Beta vulgaris HOM05D005859 ORTHO05D007576 1.1e-12 76.3 50 62.0
CANSAT64G2965 Cannabis sativa HOM05D005859 ORTHO05D007576 1.1e-12 76.3 54 61.1
HPP92_010527 Vanilla planifolia HOM05D005859 ORTHO05D007576 1.1e-12 76.3 54 59.3
HPP92_010538 Vanilla planifolia HOM05D005859 ORTHO05D007576 1.1e-12 76.3 54 59.3
HPP92_010546 Vanilla planifolia HOM05D005859 ORTHO05D007576 1.1e-12 76.3 54 59.3
HPP92_010638 Vanilla planifolia HOM05D005859 ORTHO05D007576 1.1e-12 76.3 54 59.3
ECA238G0328 Erigeron canadensis HOM05D005859 ORTHO05D007576 1.5e-12 75.9 50 62.0
Mapoly0026s0057 Marchantia polymorpha HOM05D005859 ORTHO05D007576 1.5e-12 75.9 54 61.1
Sed0022456 Sechium edule HOM05D005859 ORTHO05D007576 1.5e-12 75.9 56 58.9
Solyc02g068650.2 Solanum lycopersicum HOM05D005859 ORTHO05D007576 1.5e-12 75.9 54 59.3
BcaC04g23549 Brassica carinata HOM05D005859 ORTHO05D007576 1.9e-12 75.5 54 59.3
CSS0012487 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 1.9e-12 75.5 54 61.1
CSS0022235 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 1.9e-12 75.5 54 59.3
Lj2P347T15 Lonicera japonica HOM05D005859 ORTHO05D007576 1.9e-12 75.5 56 58.9
Rhsim05G0088100 Rhododendron simsii HOM05D005859 ORTHO05D007576 1.9e-12 75.5 56 55.4
Sopen02g017820 Solanum pennellii HOM05D005859 ORTHO05D007576 1.9e-12 75.5 54 59.3
SGA_v2.0_scaffold104G30176 Striga asiatica HOM05D005859 ORTHO05D007576 1.9e-12 75.5 54 59.3
BolC9t53628H Brassica oleracea HOM05D005859 ORTHO05D007576 2.5e-12 75.1 54 57.4
PGSC0003DMG400010428 Solanum tuberosum HOM05D005859 ORTHO05D007576 2.5e-12 75.1 54 59.3
unitig_21.g20313 Utricularia gibba HOM05D005859 ORTHO05D007576 2.5e-12 75.1 54 55.6
Cpa.g.sc10.203 Carica papaya HOM05D005859 ORTHO05D007576 3.3e-12 74.7 54 61.1
DCAR_010833 Daucus carota HOM05D005859 ORTHO05D007576 3.3e-12 74.7 56 57.1
Nitab4.5_0003379g0070 Nicotiana tabacum HOM05D005859 ORTHO05D007576 3.3e-12 74.7 54 59.3
Zm00001eb208790 Zea mays HOM05D005859 ORTHO05D007576 3.3e-12 74.7 51 62.7
Ah.07g199340 Amaranthus hybridus HOM05D005859 ORTHO05D007576 4.3e-12 74.3 50 60.0
Carub.0006s2269 Capsella rubella HOM05D005859 ORTHO05D007576 4.3e-12 74.3 54 57.4
CARHR188610 Cardamine hirsuta HOM05D005859 ORTHO05D007576 4.3e-12 74.3 54 57.4
Rhsim02G0125100 Rhododendron simsii HOM05D005859 ORTHO05D007576 4.3e-12 74.3 56 53.6
AL6G36490 Arabidopsis lyrata HOM05D005859 ORTHO05D007576 5.6e-12 73.9 54 57.4
Thhalv10004821m.g Eutrema salsugineum HOM05D005859 ORTHO05D007576 5.6e-12 73.9 54 59.3
AT5G24840 Arabidopsis thaliana HOM05D005859 ORTHO05D007576 7.4e-12 73.6 54 57.4
BcaB04g19801 Brassica carinata HOM05D005859 ORTHO05D007576 7.4e-12 73.6 50 62.0
BolC7t44822H Brassica oleracea HOM05D005859 ORTHO05D008158 7.4e-12 73.6 54 55.6
AUR62018819 Chenopodium quinoa HOM05D005859 ORTHO05D007576 9.6e-12 73.2 50 60.0
MBI07_g41262_MAGBIO Magnolia biondii HOM05D005859 ORTHO05D007576 9.6e-12 73.2 56 57.1
A06p35610 Brassica napus HOM05D005859 ORTHO05D007576 1.3e-11 72.8 54 55.6
C07p42930 Brassica napus HOM05D005859 ORTHO05D008158 1.3e-11 72.8 54 55.6
AUR62007184 Chenopodium quinoa HOM05D005859 ORTHO05D007576 1.3e-11 72.8 50 60.0
PSO063G7086 Papaver somniferum HOM05D005859 ORTHO05D007576 1.3e-11 72.8 56 57.1
Sp2g22610 Schrenkiella parvula HOM05D005859 ORTHO05D007576 1.6e-11 72.4 54 57.4
CSS0002423 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 2.1e-11 72.0 54 57.4
CSS0037116 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 2.1e-11 72.0 54 57.4
MD15G1100000 Malus domestica HOM05D005859 ORTHO05D007576 2.1e-11 72.0 54 55.6
Oeu056039.1 Olea europaea HOM05D005859 ORTHO05D007576 4.8e-11 70.9 50 60.0
Glyma.06G080300 Glycine max HOM05D005859 ORTHO05D007576 6.2e-11 70.5 54 55.6
Pp3c24_9600 Physcomitrium patens HOM05D005859 ORTHO05D007576 2.4e-10 68.6 54 55.6
AagrBONN_evm.TU.Sc2ySwM_344.1368 Anthoceros agrestis HOM05D005859 ORTHO05D007576 9.0e-10 66.6 54 53.7
PRCOL_00003713 Prasinoderma coloniale HOM05D005859 ORTHO05D007576 1.2e-09 66.2 54 57.4
CBR_g63067 Chara braunii HOM05D005859 ORTHO05D007576 1.5e-09 65.9 50 62.0
Cre07.g314550 Chlamydomonas reinhardtii HOM05D005859 ORTHO05D007576 3.4e-09 64.7 56 53.6
MCO01G481 Micromonas commoda HOM05D005859 ORTHO05D007576 3.4e-09 64.7 57 52.6
SMO358G0125 Selaginella moellendorffii HOM05D005859 ORTHO05D007576 3.8e-08 61.2 50 54.0


User provided reference genes

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