Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1096G006 Amborella trichopoda HOM05D005630 ORTHO05D006979 1.8e-42 175.6 98 100.0
Prupe.7G253200 Prunus persica HOM05D005630 ORTHO05D006979 6.7e-21 104.0 67 73.1
QL02p091555 Quercus lobata HOM05D005630 ORTHO05D006979 8.8e-21 103.6 67 74.6
Prupe.3G048400 Prunus persica HOM05D005630 ORTHO05D006979 2.0e-20 102.4 67 73.1
TWI34G2008 Tripterygium wilfordii HOM05D005630 ORTHO05D006979 3.3e-20 101.7 67 71.6
Sc08g0004950 Simmondsia chinensis HOM05D005630 ORTHO05D006979 7.4e-20 100.5 67 70.1
CiPaw.04G061600 Carya illinoinensis HOM05D005630 ORTHO05D006979 9.7e-20 100.1 67 70.1
TAR383G0582 Trochodendron aralioides HOM05D005630 ORTHO05D006979 9.7e-20 100.1 67 71.6
GSVIVG01001041001 Vitis vinifera HOM05D005630 ORTHO05D006979 1.3e-19 99.8 83 66.3
FAN23G2038 Fragaria x ananassa HOM05D005630 ORTHO05D006979 2.2e-19 99.0 65 69.2
RcHm_v2.0_Chr2g0086501 Rosa chinensis HOM05D005630 ORTHO05D006979 2.2e-19 99.0 70 70.0
MD02G1012200 Malus domestica HOM05D005630 ORTHO05D006979 2.8e-19 98.6 67 70.1
CANSAT11G0524 Cannabis sativa HOM05D005630 ORTHO05D006979 3.7e-19 98.2 67 68.7
MBI07_g26347_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 4.8e-19 97.8 86 72.1
FAN28G1107 Fragaria x ananassa HOM05D005630 ORTHO05D006979 6.3e-19 97.4 65 69.2
Cfa020874 Carpinus fangiana HOM05D005630 ORTHO05D006979 8.2e-19 97.1 84 69.0
Actinidia03956 Actinidia chinensis HOM05D005630 ORTHO05D006979 1.1e-18 96.7 64 73.4
ClCG10G005100 Citrullus lanatus HOM05D005630 ORTHO05D006979 1.8e-18 95.9 67 70.1
Gohir.A05G280400 Gossypium hirsutum HOM05D005630 ORTHO05D006979 1.8e-18 95.9 67 70.1
MD15G1158000 Malus domestica HOM05D005630 ORTHO05D006979 1.8e-18 95.9 63 71.4
Thecc.10G171800 Theobroma cacao HOM05D005630 ORTHO05D006979 1.8e-18 95.9 66 69.7
Eucgr.H01228 Eucalyptus grandis HOM05D005630 ORTHO05D006979 2.4e-18 95.5 67 65.7
Eucgr.H01921 Eucalyptus grandis HOM05D005630 ORTHO05D006979 2.4e-18 95.5 67 65.7
Nn8g40117 Nelumbo nucifera HOM05D005630 ORTHO05D006979 2.4e-18 95.5 67 68.7
FAN26G1041 Fragaria x ananassa HOM05D005630 ORTHO05D006979 3.1e-18 95.1 66 66.7
FvH4_1g01540 Fragaria vesca HOM05D005630 ORTHO05D006979 4.1e-18 94.7 59 74.6
Haze_19305 Corylus avellana HOM05D005630 ORTHO05D006979 5.3e-18 94.4 66 68.2
Duzib128G0941 Durio zibethinus HOM05D005630 ORTHO05D006979 5.3e-18 94.4 67 68.7
Gohir.D05G282200 Gossypium hirsutum HOM05D005630 ORTHO05D006979 5.3e-18 94.4 67 68.7
Gorai.009G295600 Gossypium raimondii HOM05D005630 ORTHO05D006979 5.3e-18 94.4 67 68.7
Potri.018G113200 Populus trichocarpa HOM05D005630 ORTHO05D006979 5.3e-18 94.4 69 65.2
PGR142G4039 Punica granatum HOM05D005630 ORTHO05D006979 5.3e-18 94.4 67 65.7
Sed0022514 Sechium edule HOM05D005630 ORTHO05D006979 7.0e-18 94.0 87 66.7
COL.COLO4_35448 Corchorus olitorius HOM05D000321 ORTHO05D000204 9.1e-18 93.6 48 85.4
Eucgr.L01073 Eucalyptus grandis HOM05D005630 ORTHO05D006979 9.1e-18 93.6 67 64.2
Oeu028785.1 Olea europaea HOM05D005630 ORTHO05D006979 9.1e-18 93.6 67 68.7
Atru.chr7.200 Acer truncatum HOM05D005630 ORTHO05D006979 1.6e-17 92.8 66 68.2
CSS0013521 Camellia sinensis var. sinensis HOM05D005630 ORTHO05D006979 2.0e-17 92.4 67 70.1
Cpa.g.sc20.36 Carica papaya HOM05D005630 ORTHO05D006979 2.0e-17 92.4 67 65.7
EL10Ac4g09637 Beta vulgaris HOM05D005630 ORTHO05D006979 2.6e-17 92.0 66 66.7
Actinidia37787 Actinidia chinensis HOM05D005630 ORTHO05D006979 3.5e-17 91.7 65 70.8
Manes.03G015700 Manihot esculenta HOM05D005630 ORTHO05D006979 3.5e-17 91.7 57 77.2
Hma1.2p1_1164F.1_g262820 Hydrangea macrophylla HOM05D005630 ORTHO05D006979 5.9e-17 90.9 67 68.7
Nn2g11495 Nelumbo nucifera HOM05D005630 ORTHO05D006979 2.2e-16 89.0 63 66.7
Nitab4.5_0005975g0020 Nicotiana tabacum HOM05D005630 ORTHO05D006979 2.2e-16 89.0 67 65.7
Dinv41416 Davidia involucrata HOM05D005630 ORTHO05D006979 5.0e-16 87.8 66 66.7
MELO3C014176.2 Cucumis melo HOM05D005630 ORTHO05D006979 6.5e-16 87.4 67 65.7
Rhsim03G0057400 Rhododendron simsii HOM05D005630 ORTHO05D006979 6.5e-16 87.4 48 83.3
HanXRQChr10g0314501 Helianthus annuus HOM05D005630 ORTHO05D006979 8.5e-16 87.0 65 63.1
Nitab4.5_0000914g0010 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.1e-15 86.7 67 64.2
Ca_08945_v3 Cicer arietinum L. HOM05D005630 ORTHO05D006979 2.5e-15 85.5 51 74.5
Medtr6g088605 Medicago truncatula HOM05D005630 ORTHO05D006979 2.5e-15 85.5 83 56.6
PSO210G0346 Papaver somniferum HOM05D005630 ORTHO05D006979 2.5e-15 85.5 54 77.8
PSO210G6044 Papaver somniferum HOM05D005630 ORTHO05D006979 2.5e-15 85.5 54 77.8
Lsat_1_v5_gn_5_90640 Lactuca sativa HOM05D005630 ORTHO05D006979 3.2e-15 85.1 64 65.6
Psat3g037680 Pisum sativum HOM05D005630 ORTHO05D006979 3.2e-15 85.1 51 74.5
Cc06_g16720 Coffea canephora HOM05D005630 ORTHO05D006979 4.2e-15 84.7 65 61.5
CsaV3_3G004770 Cucumis sativus L. HOM05D005630 ORTHO05D006979 5.5e-15 84.3 67 62.7
Medtr7g103190 Medicago truncatula HOM05D005630 ORTHO05D006979 5.5e-15 84.3 48 77.1
Nitab4.5_0002880g0080 Nicotiana tabacum HOM05D005630 ORTHO05D006979 5.5e-15 84.3 66 63.6
Peaxi162Scf00083g01117 Petunia axillaris HOM05D005630 ORTHO05D006979 5.5e-15 84.3 59 67.8
Thhalv10021733m.g Eutrema salsugineum HOM05D005630 ORTHO05D006979 7.2e-15 84.0 64 60.9
Zm00001eb119770 Zea mays HOM05D005630 ORTHO05D006979 7.2e-15 84.0 53 75.5
MSTRG.19630 Avicennia marina HOM05D005630 ORTHO05D006979 9.4e-15 83.6 85 57.6
Nitab4.5_0003965g0050 Nicotiana tabacum HOM05D005630 ORTHO05D006979 9.4e-15 83.6 66 62.1
TPR.G21379 Trifolium pratense HOM05D005630 ORTHO05D006979 9.4e-15 83.6 51 72.5
TPR.G31501 Trifolium pratense HOM05D005630 ORTHO05D006979 9.4e-15 83.6 51 72.5
Os01g0220300 Oryza sativa ssp. japonica HOM05D005630 ORTHO05D006979 1.6e-14 82.8 59 66.1
CAN.G1505.19 Capsicum annuum HOM05D005630 ORTHO05D006979 2.1e-14 82.4 67 61.2
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 2.1e-14 82.4 67 64.2
BcaB04g19003 Brassica carinata HOM05D005630 ORTHO05D006979 2.7e-14 82.0 64 59.4
BcaC05g28577 Brassica carinata HOM05D005630 ORTHO05D006979 2.7e-14 82.0 64 59.4
A05p30870 Brassica napus HOM05D005630 ORTHO05D006979 2.7e-14 82.0 64 59.4
C05p46800 Brassica napus HOM05D005630 ORTHO05D006979 2.7e-14 82.0 64 59.4
BolC5t33410H Brassica oleracea HOM05D005630 ORTHO05D006979 2.7e-14 82.0 64 59.4
CAN.G1465.11 Capsicum annuum HOM05D005630 ORTHO05D006979 2.7e-14 82.0 65 63.1
THA.LOC104826572 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 3.6e-14 81.6 48 77.1
BraA05t21929Z Brassica rapa HOM05D005630 ORTHO05D006979 4.7e-14 81.3 64 59.4
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 4.7e-14 81.3 45 77.8
Lj3g0020108 Lotus japonicus HOM05D005630 ORTHO05D006979 4.7e-14 81.3 46 78.3
PGSC0003DMG400023408 Solanum tuberosum HOM05D005630 ORTHO05D006979 4.7e-14 81.3 67 61.2
Lj2g0025219 Lotus japonicus HOM05D005630 ORTHO05D006979 6.1e-14 80.9 84 56.0
Sp3g16800 Schrenkiella parvula HOM05D005630 ORTHO05D006979 6.1e-14 80.9 64 59.4
VMungo0464G1149 Vigna mungo HOM05D005630 ORTHO05D006979 6.1e-14 80.9 51 70.6
AT3G18760 Arabidopsis thaliana HOM05D005630 ORTHO05D006979 8.0e-14 80.5 63 61.9
Solyc05g054990.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 1.0e-13 80.1 62 61.3
Sopen05g033450 Solanum pennellii HOM05D005630 ORTHO05D006979 1.0e-13 80.1 62 61.3
VMungo0464G1592 Vigna mungo HOM05D005630 ORTHO05D006979 1.0e-13 80.1 51 70.6
Ah.01g003710 Amaranthus hybridus HOM05D005630 ORTHO05D006979 1.4e-13 79.7 67 65.7
BcaB06g25926 Brassica carinata HOM05D005630 ORTHO05D006979 1.4e-13 79.7 64 57.8
C03p49710 Brassica napus HOM05D005630 ORTHO05D006979 1.4e-13 79.7 48 77.1
AL3G32110 Arabidopsis lyrata HOM05D005630 ORTHO05D006979 1.8e-13 79.3 42 85.7
CARHR094150 Cardamine hirsuta HOM05D005630 ORTHO05D006979 1.8e-13 79.3 42 85.7
Ciclev10009802m.g Citrus clementina HOM05D005630 ORTHO05D006979 1.8e-13 79.3 65 63.1
Glyma.16G077600 Glycine max HOM05D005630 ORTHO05D006979 2.3e-13 79.0 66 59.1
Aa31LG8G5570 Aethionema arabicum HOM05D005630 ORTHO05D006979 3.0e-13 78.6 42 83.3
Carub.0003s1855 Capsella rubella HOM05D005630 ORTHO05D006979 3.0e-13 78.6 63 57.1
BraA03t13240Z Brassica rapa HOM05D005630 ORTHO05D006979 4.0e-13 78.2 48 75.0
Glyma.01G008800 Glycine max HOM05D005630 ORTHO05D006979 4.0e-13 78.2 51 70.6
Oeu040774.1 Olea europaea HOM05D005630 ORTHO05D006979 4.0e-13 78.2 70 60.0
Sopen02g029090 Solanum pennellii HOM05D005630 ORTHO05D006979 4.0e-13 78.2 65 61.5
Migut.J01281 Erythranthe guttata HOM05D005630 ORTHO05D006979 5.2e-13 77.8 67 59.7
Phvul.004G170400 Phaseolus vulgaris HOM05D005630 ORTHO05D006979 5.2e-13 77.8 51 70.6
Solyc02g084380.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 5.2e-13 77.8 65 61.5
BolC3t17269H Brassica oleracea HOM05D005630 ORTHO05D006979 6.8e-13 77.4 48 75.0
Lalb_Chr01g0020901 Lupinus albus HOM05D005630 ORTHO05D006979 6.8e-13 77.4 51 66.7
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 8.8e-13 77.0 52 67.3
unitig_48.g30288 Utricularia gibba HOM05D005630 ORTHO05D006979 8.8e-13 77.0 52 67.3
unitig_46.g18303 Utricularia gibba HOM05D005630 ORTHO05D006979 1.5e-12 76.3 52 67.3
arahy.Tifrunner.gnm1.ann1.N9H741 Arachis hypogaea HOM05D005630 ORTHO05D006979 2.0e-12 75.9 89 58.4
vmacro07529 Vaccinium macrocarpon HOM05D005630 ORTHO05D006979 4.4e-12 74.7 40 85.0
THA.LOC104815401 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 1.7e-11 72.8 67 53.7
SGA_v2.0_scaffold336G49163 Striga asiatica HOM05D005630 ORTHO05D006979 3.7e-11 71.6 65 58.5
HPP92_008634 Vanilla planifolia HOM05D005630 ORTHO05D006979 3.7e-11 71.6 61 60.7
A03p40820 Brassica napus HOM05D005630 ORTHO05D006979 4.8e-11 71.2 64 54.7
Psat5g026240 Pisum sativum HOM05D005630 ORTHO05D006979 6.3e-11 70.9 39 82.1
SalBow1G1736 Salvia bowleyana HOM05D005630 ORTHO05D006979 1.4e-10 69.7 42 71.4
FAN19G2317 Fragaria x ananassa HOM05D005630 ORTHO05D006979 5.4e-10 67.8 48 62.5
Medtr5g037160 Medicago truncatula HOM05D005630 ORTHO05D000782 2.9e-08 62.0 34 79.4
SalBow1G6627 Salvia bowleyana HOM05D005630 ORTHO05D006979 6.5e-08 60.8 36 72.2
Eucgr.B02192 Eucalyptus grandis HOM05D005630 ORTHO05D006979 8.5e-08 60.5 37 73.0
MBI07_g35858_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 9.4e-07 57.0 27 96.3
AagrBONN_evm.TU.Sc2ySwM_117.2919 Anthoceros agrestis HOM05D005630 ORTHO05D006979 1.6e-06 56.2 41 61.0
SMO146G0230 Selaginella moellendorffii HOM05D005630 ORTHO05D006979 1.6e-06 56.2 41 58.5
Pp3c3_21570 Physcomitrium patens HOM05D005630 ORTHO05D006979 6.1e-06 54.3 41 53.7


User provided reference genes

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