Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1094G019 Amborella trichopoda HOM05D006242 ORTHO05D007936 6.7e-69 263.8 130 100.0
Rhsim06G0063600 Rhododendron simsii HOM05D006242 ORTHO05D007936 1.4e-26 123.2 81 65.4
Dinv10532 Davidia involucrata HOM05D006242 ORTHO05D007936 4.1e-26 121.7 81 65.4
Oeu058943.1 Olea europaea HOM05D006242 ORTHO05D007936 9.2e-26 120.6 81 64.2
Nn7g38280 Nelumbo nucifera HOM05D006242 ORTHO05D007936 1.2e-25 120.2 81 64.2
Prupe.4G115300 Prunus persica HOM05D006242 ORTHO05D007936 1.2e-25 120.2 80 68.8
Actinidia22421 Actinidia chinensis HOM05D006242 ORTHO05D007936 2.1e-25 119.4 81 64.2
PSO541G0450 Papaver somniferum HOM05D006242 ORTHO05D007936 2.1e-25 119.4 81 67.9
GSVIVG01006138001 Vitis vinifera HOM05D006242 ORTHO05D007936 2.1e-25 119.4 81 64.2
GSVIVG01012122001 Vitis vinifera HOM05D006242 ORTHO05D007936 2.1e-25 119.4 81 64.2
Nitab4.5_0008021g0020 Nicotiana tabacum HOM05D006242 ORTHO05D007936 4.6e-25 118.2 81 63.0
Glyma.20G074000 Glycine max HOM05D006242 ORTHO05D007936 6.0e-25 117.9 81 65.4
Glyma.02G163900 Glycine max HOM05D006242 ORTHO05D007936 7.8e-25 117.5 83 65.1
MBI02_g26996_MAGBIO Magnolia biondii HOM05D006242 ORTHO05D007936 7.8e-25 117.5 78 66.7
Cfa000677 Carpinus fangiana HOM05D006242 ORTHO05D007936 1.3e-24 116.7 82 67.1
Haze_06141 Corylus avellana HOM05D006242 ORTHO05D007936 1.3e-24 116.7 82 67.1
Sabra01G0132400 Salix brachista HOM05D006242 ORTHO05D007936 1.3e-24 116.7 79 64.6
PSO675G0930 Papaver somniferum HOM05D006242 ORTHO05D007936 1.7e-24 116.3 81 65.4
Potri.001G159600 Populus trichocarpa HOM05D006242 ORTHO05D007936 1.7e-24 116.3 79 63.3
Sp2g07040 Schrenkiella parvula HOM05D006242 ORTHO05D007936 1.7e-24 116.3 81 63.0
Hma1.2p1_1700F.1_g298200 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 2.3e-24 115.9 81 63.0
Hma1.2p1_1700F.1_g298210 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 2.3e-24 115.9 81 63.0
Lj6g0025800 Lotus japonicus HOM05D006242 ORTHO05D007936 2.3e-24 115.9 80 66.2
DCAR_007782 Daucus carota HOM05D006242 ORTHO05D007936 3.0e-24 115.5 81 63.0
Atru.chr10.429 Acer truncatum HOM05D006242 ORTHO05D007936 3.9e-24 115.2 80 63.8
Ciclev10016161m.g Citrus clementina HOM05D006242 ORTHO05D007936 3.9e-24 115.2 79 67.1
FAN16G0457 Fragaria x ananassa HOM05D006242 ORTHO05D007936 3.9e-24 115.2 80 65.0
FAN21G1956 Fragaria x ananassa HOM05D006242 ORTHO05D007936 3.9e-24 115.2 80 65.0
Phvul.007G242500 Phaseolus vulgaris HOM05D006242 ORTHO05D007936 3.9e-24 115.2 80 65.0
TWI38G1455 Tripterygium wilfordii HOM05D006242 ORTHO05D007936 3.9e-24 115.2 81 63.0
Lalb_Chr19g0129141 Lupinus albus HOM05D006242 ORTHO05D007936 5.1e-24 114.8 81 64.2
CAN.G79.44 Capsicum annuum HOM05D006242 ORTHO05D007936 6.6e-24 114.4 81 60.5
MD10G1229500 Malus domestica HOM05D006242 ORTHO05D007936 6.6e-24 114.4 78 66.7
Cc09_g05740 Coffea canephora HOM05D006242 ORTHO05D007936 1.1e-23 113.6 81 60.5
FvH4_3g12650 Fragaria vesca HOM05D006242 ORTHO05D007936 1.1e-23 113.6 80 63.8
Hma1.2p1_1499F.1_g287250 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 1.1e-23 113.6 81 61.7
Hma1.2p1_1499F.1_g287260 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 1.1e-23 113.6 81 61.7
RcHm_v2.0_Chr5g0020621 Rosa chinensis HOM05D006242 ORTHO05D007936 1.1e-23 113.6 80 63.8
Lj6g0012918 Lotus japonicus HOM05D006242 ORTHO05D007936 1.5e-23 113.2 80 65.0
Sc17g0004220 Simmondsia chinensis HOM05D006242 ORTHO05D007936 1.5e-23 113.2 81 60.5
PGSC0003DMG400014939 Solanum tuberosum HOM05D006242 ORTHO05D007936 1.5e-23 113.2 81 60.5
A05p10660 Brassica napus HOM05D003281 ORTHO05D004128 2.5e-23 112.5 81 61.7
C04p13760 Brassica napus HOM05D003281 ORTHO05D004128 2.5e-23 112.5 81 61.7
BolC4t22966H Brassica oleracea HOM05D003281 ORTHO05D004128 2.5e-23 112.5 81 61.7
Manes.03G074100 Manihot esculenta HOM05D006242 ORTHO05D007936 2.5e-23 112.5 81 61.7
Hund15670 Selenicereus undatus HOM05D006242 ORTHO05D007936 2.5e-23 112.5 81 59.3
arahy.Tifrunner.gnm1.ann1.PA3R73 Arachis hypogaea HOM05D006242 ORTHO05D007936 3.3e-23 112.1 81 63.0
FAN25G2599 Fragaria x ananassa HOM05D006242 ORTHO05D007936 3.3e-23 112.1 80 62.5
AUR62037908 Chenopodium quinoa HOM05D006242 ORTHO05D007936 5.6e-23 111.3 81 60.5
Sed0024740 Sechium edule HOM05D006242 ORTHO05D007936 5.6e-23 111.3 78 61.5
Solyc02g031980.3 Solanum lycopersicum HOM05D006242 ORTHO05D007936 5.6e-23 111.3 81 59.3
SpUn0157_0010 Schrenkiella parvula HOM05D006242 ORTHO05D007936 7.3e-23 110.9 81 60.5
Psat6g094920 Pisum sativum HOM05D006242 ORTHO05D007936 9.5e-23 110.5 75 65.3
QL11p013482 Quercus lobata HOM05D006242 ORTHO05D007936 9.5e-23 110.5 78 62.8
Sopen02g010240 Solanum pennellii HOM05D006242 ORTHO05D007936 9.5e-23 110.5 81 59.3
TPR.G22035 Trifolium pratense HOM05D006242 ORTHO05D007936 9.5e-23 110.5 75 65.3
AT2G35035 Arabidopsis thaliana HOM05D006242 ORTHO05D007936 1.2e-22 110.2 80 58.8
Ca_19722_v3 Cicer arietinum L. HOM05D006242 ORTHO05D007936 1.2e-22 110.2 80 62.5
Thecc.02G006000 Theobroma cacao HOM05D006242 ORTHO05D007936 1.2e-22 110.2 81 63.0
Carub.0004s1673 Capsella rubella HOM05D006242 ORTHO05D007936 1.6e-22 109.8 81 58.0
Zm00001eb233240 Zea mays HOM05D006242 ORTHO05D007936 1.6e-22 109.8 78 64.1
Aqoxy1G01391 Aquilegia oxysepala HOM05D006242 ORTHO05D007936 2.1e-22 109.4 80 58.8
AL4G31060 Arabidopsis lyrata HOM05D006242 ORTHO05D007936 2.1e-22 109.4 81 58.0
Thhalv10017018m.g Eutrema salsugineum HOM05D006242 ORTHO05D007936 2.1e-22 109.4 81 59.3
SGA_v2.0_scaffold4G02502 Striga asiatica HOM05D006242 ORTHO05D007936 2.1e-22 109.4 82 63.4
SGA_v2.0_scaffold51G18672 Striga asiatica HOM05D006242 ORTHO05D007936 2.1e-22 109.4 82 63.4
Cc00_g22870 Coffea canephora HOM05D006242 ORTHO05D007936 2.8e-22 109.0 81 59.3
CANSAT35G0032 Cannabis sativa HOM05D006242 ORTHO05D007936 3.6e-22 108.6 81 61.7
MSTRG.20044 Avicennia marina HOM05D006242 ORTHO05D007936 4.7e-22 108.2 81 64.2
HanXRQChr12g0381511 Helianthus annuus HOM05D006242 ORTHO05D007936 6.2e-22 107.8 81 60.5
ClCG01G025640 Citrullus lanatus HOM05D006242 ORTHO05D007936 1.1e-21 107.1 78 61.5
Gohir.D12G047300 Gossypium hirsutum HOM05D006242 ORTHO05D007936 1.1e-21 107.1 81 60.5
SalBow7G3063 Salvia bowleyana HOM05D006242 ORTHO05D007936 1.8e-21 106.3 81 58.0
Duzib248G1438 Durio zibethinus HOM05D006242 ORTHO05D007936 2.4e-21 105.9 81 60.5
Gohir.A12G048500 Gossypium hirsutum HOM05D006242 ORTHO05D007936 2.4e-21 105.9 81 60.5
EL10Ac7g16757 Beta vulgaris HOM05D006242 ORTHO05D007936 3.1e-21 105.5 81 60.5
Gorai.008G050000 Gossypium raimondii HOM05D006242 ORTHO05D007936 3.1e-21 105.5 81 59.3
Medtr1g050428 Medicago truncatula HOM05D006242 ORTHO05D007936 4.0e-21 105.1 75 64.0
SEGI_06259 Sequoiadendron giganteum HOM05D006242 ORTHO05D007936 4.0e-21 105.1 79 62.0
Cpa.g.sc30.139 Carica papaya HOM05D006242 ORTHO05D007936 5.2e-21 104.8 81 58.0
CsaV3_6G052870 Cucumis sativus L. HOM05D006242 ORTHO05D007936 5.2e-21 104.8 78 60.3
Migut.K01175 Erythranthe guttata HOM05D006242 ORTHO05D007936 5.2e-21 104.8 82 58.5
CDE05G0364 Ceratophyllum demersum HOM05D006242 ORTHO05D007936 8.9e-21 104.0 81 55.6
Eucgr.B01565 Eucalyptus grandis HOM05D006242 ORTHO05D007936 1.2e-20 103.6 81 56.8
HPP92_011011 Vanilla planifolia HOM05D006242 ORTHO05D007936 1.5e-20 103.2 80 58.8
PGR004G2427 Punica granatum HOM05D006242 ORTHO05D007936 7.6e-20 100.9 80 58.8
Aa31LG9G16170 Aethionema arabicum HOM05D003281 ORTHO05D004128 1.3e-19 100.1 81 56.8
ECA232G2813 Erigeron canadensis HOM05D006242 ORTHO05D007936 2.2e-19 99.4 78 59.0
SMO203G0088 Selaginella moellendorffii HOM05D006242 ORTHO05D007936 3.2e-18 95.5 79 54.4
Pp3c12_18460 Physcomitrium patens HOM05D006242 ORTHO05D007936 6.0e-17 91.3 79 51.9
Cc09_g05640 Coffea canephora HOM05D006242 ORTHO05D007936 3.9e-16 88.6 67 55.2
MELO3C007020.2 Cucumis melo HOM05D006242 ORTHO05D007936 1.5e-15 86.7 113 41.6
Cc09_g05610 Coffea canephora HOM05D006242 ORTHO05D007936 2.5e-15 85.9 62 59.7
AagrBONN_evm.TU.Sc2ySwM_228.1028 Anthoceros agrestis HOM05D006242 ORTHO05D007936 4.3e-15 85.1 78 50.0
Cc09_g05660 Coffea canephora HOM05D006242 ORTHO05D007936 5.6e-15 84.7 81 50.6
Cc09_g05680 Coffea canephora HOM05D006242 ORTHO05D007936 2.1e-14 82.8 65 52.3
Nitab4.5_0000138g0120 Nicotiana tabacum HOM05D006242 ORTHO05D007936 6.2e-14 81.3 55 60.0
THA.LOC104798560 Tarenaya hassleriana HOM05D006242 ORTHO05D007936 9.0e-13 77.4 146 32.2
arahy.Tifrunner.gnm1.ann1.VZGM4G Arachis hypogaea HOM05D006242 ORTHO05D007936 1.5e-12 76.6 70 51.4
CBR_g46754 Chara braunii HOM05D006242 ORTHO05D007936 4.4e-12 75.1 71 50.7
Peaxi162Scf00198g01026 Petunia axillaris HOM05D006242 ORTHO05D007936 9.9e-12 73.9 53 54.7
BcaC02g11584 Brassica carinata HOM05D006242 ORTHO05D007936 1.3e-11 73.6 81 48.1
TPR.G10622 Trifolium pratense HOM05D006242 ORTHO05D007936 2.2e-11 72.8 64 53.1
MCO04G402 Micromonas commoda HOM05D006242 ORTHO05D007936 2.9e-11 72.4 80 43.8
SHI14613 Sapria himalayana HOM05D000105 ORTHO05D000023 3.8e-11 72.0 55 56.4
AUR62040160 Chenopodium quinoa HOM05D006242 ORTHO05D007936 4.9e-11 71.6 81 46.9
Os02g0173000 Oryza sativa ssp. japonica HOM05D006242 ORTHO05D007936 8.4e-11 70.9 53 56.6
Cc09_g05720 Coffea canephora HOM05D006242 ORTHO05D007936 1.1e-10 70.5 49 61.2
COL.COLO4_17635 Corchorus olitorius HOM05D006242 ORTHO05D007936 5.4e-10 68.2 49 63.3
Lj1A1147G28 Lonicera japonica HOM05D006242 ORTHO05D007936 1.2e-09 67.0 49 59.2
VMungo0720G1734 Vigna mungo HOM05D006242 ORTHO05D007936 3.5e-09 65.5 80 45.0
Mapoly0026s0041 Marchantia polymorpha HOM05D006242 ORTHO05D007936 6.0e-09 64.7 79 43.0
PRCOL_00002215 Prasinoderma coloniale HOM05D005590 ORTHO05D007084 3.6e-06 55.5 85 38.8


User provided reference genes

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