Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1094G005 Amborella trichopoda HOM05D006936 ORTHO05D008273 2.5e-107 392.1 196 100.0
GSVIVG01037658001 Vitis vinifera HOM05D006936 ORTHO05D008273 3.9e-44 182.2 154 62.3
Hma1.2p1_0738F.1_g211120 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 8.7e-44 181.0 151 64.2
Hma1.2p1_2518F.1_g323766 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 8.7e-44 181.0 151 64.2
Potri.003G122100 Populus trichocarpa HOM05D006936 ORTHO05D008273 8.7e-44 181.0 153 64.1
CSS0049611 Camellia sinensis var. sinensis HOM05D006936 ORTHO05D008273 1.9e-43 179.9 157 63.1
Nitab4.5_0003495g0030 Nicotiana tabacum HOM05D006936 ORTHO05D008273 1.9e-43 179.9 143 63.6
DCAR_022566 Daucus carota HOM05D006936 ORTHO05D008273 2.5e-43 179.5 143 63.6
Phvul.006G044500 Phaseolus vulgaris HOM05D006936 ORTHO05D008273 2.5e-43 179.5 142 65.5
Rhsim06G0217500 Rhododendron simsii HOM05D000228 ORTHO05D001122 3.3e-43 179.1 155 62.6
AL7G25870 Arabidopsis lyrata HOM05D006936 ORTHO05D008273 4.3e-43 178.7 149 59.7
Cpa.g.sc12.300 Carica papaya HOM05D006936 ORTHO05D008273 4.3e-43 178.7 151 62.3
Eucgr.F03471 Eucalyptus grandis HOM05D006936 ORTHO05D008273 4.3e-43 178.7 150 61.3
Gohir.D01G067300 Gossypium hirsutum HOM05D006936 ORTHO05D008273 4.3e-43 178.7 145 64.8
Thecc.07G035400 Theobroma cacao HOM05D006936 ORTHO05D008273 4.3e-43 178.7 145 63.4
THA.LOC104813424 Tarenaya hassleriana HOM05D006936 ORTHO05D008273 7.3e-43 177.9 139 67.6
VMungo0540G1312 Vigna mungo HOM05D006936 ORTHO05D008273 7.3e-43 177.9 142 64.8
Glyma.18G095900 Glycine max HOM05D006936 ORTHO05D008273 9.6e-43 177.6 141 63.8
Sed0005355 Sechium edule HOM05D006936 ORTHO05D008273 9.6e-43 177.6 134 67.9
HPP92_004131 Vanilla planifolia HOM05D006936 ORTHO05D008273 9.6e-43 177.6 155 58.7
Aqoxy3G01790 Aquilegia oxysepala HOM05D006936 ORTHO05D008273 1.3e-42 177.2 152 60.5
CDE05G0574 Ceratophyllum demersum HOM05D006936 ORTHO05D008273 1.3e-42 177.2 131 67.2
Lj6g0001928 Lotus japonicus HOM05D006936 ORTHO05D008273 1.6e-42 176.8 152 61.8
RcHm_v2.0_Chr5g0040171 Rosa chinensis HOM05D006936 ORTHO05D008273 1.6e-42 176.8 151 59.6
Gorai.002G089200 Gossypium raimondii HOM05D006936 ORTHO05D008273 2.1e-42 176.4 145 64.1
Solyc07g064640.3 Solanum lycopersicum HOM05D006936 ORTHO05D008273 2.1e-42 176.4 143 62.9
Sopen07g032840 Solanum pennellii HOM05D006936 ORTHO05D008273 2.1e-42 176.4 143 63.6
TAR624G1327 Trochodendron aralioides HOM05D006936 ORTHO05D008273 2.1e-42 176.4 133 66.9
PGSC0003DMG401022215 Solanum tuberosum HOM05D006936 ORTHO05D008273 2.8e-42 176.0 143 62.9
Glyma.08G317000 Glycine max HOM05D006936 ORTHO05D008273 3.6e-42 175.6 145 63.4
Oeu048401.1 Olea europaea HOM05D006936 ORTHO05D008273 3.6e-42 175.6 126 69.0
arahy.Tifrunner.gnm1.ann1.MX8M57 Arachis hypogaea HOM05D006936 ORTHO05D008273 4.8e-42 175.3 142 63.4
Nitab4.5_0007360g0030 Nicotiana tabacum HOM05D006936 ORTHO05D008273 4.8e-42 175.3 143 62.2
arahy.Tifrunner.gnm1.ann1.HAV09U Arachis hypogaea HOM05D006936 ORTHO05D008273 6.2e-42 174.9 142 62.7
Manes.03G129900 Manihot esculenta HOM05D006936 ORTHO05D008273 6.2e-42 174.9 161 59.6
Ciclev10009642m.g Citrus clementina HOM05D006936 ORTHO05D008273 8.1e-42 174.5 149 63.1
AT4G26965 Arabidopsis thaliana HOM05D006936 ORTHO05D008273 1.1e-41 174.1 149 60.4
Medtr3g052260 Medicago truncatula HOM05D006936 ORTHO05D008273 1.8e-41 173.3 152 59.2
MD11G1216700 Malus domestica HOM05D006936 ORTHO05D008273 2.4e-41 172.9 132 63.6
Potri.001G109600 Populus trichocarpa HOM05D006936 ORTHO05D008273 3.1e-41 172.6 153 62.1
Sabra01G0082900 Salix brachista HOM05D006936 ORTHO05D008273 3.1e-41 172.6 153 60.8
TWI39G1260 Tripterygium wilfordii HOM05D006936 ORTHO05D008273 3.1e-41 172.6 136 64.0
Haze_09683 Corylus avellana HOM05D006936 ORTHO05D008273 4.0e-41 172.2 144 63.2
Migut.H01824 Erythranthe guttata HOM05D006936 ORTHO05D008273 6.9e-41 171.4 163 57.7
FAN21G0204 Fragaria x ananassa HOM05D006936 ORTHO05D008273 6.9e-41 171.4 151 58.9
FvH4_3g22870 Fragaria vesca HOM05D006936 ORTHO05D008273 9.0e-41 171.0 151 58.9
FAN11G3489 Fragaria x ananassa HOM05D006936 ORTHO05D008273 9.0e-41 171.0 151 58.9
TWI38G2356 Tripterygium wilfordii HOM05D006936 ORTHO05D008273 9.0e-41 171.0 136 62.5
Cfa020336 Carpinus fangiana HOM05D000228 ORTHO05D001122 1.2e-40 170.6 142 61.3
CiPaw.11G190300 Carya illinoinensis HOM05D006936 ORTHO05D008273 1.2e-40 170.6 153 61.4
Ca_19852_v3 Cicer arietinum L. HOM05D006936 ORTHO05D008273 1.2e-40 170.6 152 59.2
EL10Ac4g07798 Beta vulgaris HOM05D006936 ORTHO05D008273 1.5e-40 170.2 161 55.9
PGR031G2182 Punica granatum HOM05D006936 ORTHO05D008273 1.5e-40 170.2 134 64.2
TPR.G33779 Trifolium pratense HOM05D006936 ORTHO05D008273 2.0e-40 169.9 152 58.6
ClCG10G005400 Citrullus lanatus HOM05D006936 ORTHO05D008273 2.6e-40 169.5 176 56.2
Duzib213G0701 Durio zibethinus HOM05D006936 ORTHO05D008273 2.6e-40 169.5 145 63.4
Gohir.A01G080100 Gossypium hirsutum HOM05D006936 ORTHO05D008273 2.6e-40 169.5 145 63.4
Cc05_g13850 Coffea canephora HOM05D006936 ORTHO05D008273 3.4e-40 169.1 156 57.1
Thhalv10026517m.g Eutrema salsugineum HOM05D006936 ORTHO05D008273 4.5e-40 168.7 128 64.1
Os09g0500200 Oryza sativa ssp. japonica HOM05D006936 ORTHO05D008273 4.5e-40 168.7 153 55.6
MSTRG.12976 Avicennia marina HOM05D006936 ORTHO05D008273 5.8e-40 168.3 168 57.1
SGA_v2.0_scaffold8G04322 Striga asiatica HOM05D006936 ORTHO05D008273 5.8e-40 168.3 162 57.4
Carub.0007s1390 Capsella rubella HOM05D006936 ORTHO05D008273 7.6e-40 167.9 150 56.7
CsaV3_3G005130 Cucumis sativus L. HOM05D006936 ORTHO05D008273 9.9e-40 167.5 156 59.6
Psat5g178440 Pisum sativum HOM05D006936 ORTHO05D008273 1.3e-39 167.2 164 55.5
Prupe.4G214700 Prunus persica HOM05D006936 ORTHO05D008273 1.3e-39 167.2 169 50.9
Lalb_Chr20g0113821 Lupinus albus HOM05D006936 ORTHO05D008273 2.9e-39 166.0 144 58.3
PSO832G3825 Papaver somniferum HOM05D006936 ORTHO05D008273 4.9e-39 165.2 153 56.9
Sp7g24910 Schrenkiella parvula HOM05D006936 ORTHO05D008273 4.9e-39 165.2 161 55.3
PSO210G5704 Papaver somniferum HOM05D006936 ORTHO05D008273 6.4e-39 164.9 143 58.7
BcaNung03571 Brassica carinata HOM05D006936 ORTHO05D008273 8.4e-39 164.5 158 54.4
BcaC07g38260 Brassica carinata HOM05D006936 ORTHO05D008273 1.4e-38 163.7 158 53.8
QL08p009960 Quercus lobata HOM05D006936 ORTHO05D008273 1.4e-38 163.7 132 62.9
Sc16g0005990 Simmondsia chinensis HOM05D006936 ORTHO05D008273 1.9e-38 163.3 127 64.6
unitig_8.g4785 Utricularia gibba HOM05D006936 ORTHO05D008273 1.9e-38 163.3 161 54.0
HanXRQChr03g0076461 Helianthus annuus HOM05D006936 ORTHO05D008273 4.6e-37 158.7 142 62.0
Atru.chr2.3444 Acer truncatum HOM05D006936 ORTHO05D008273 1.3e-36 157.1 99 74.7
MBI02_g21871_MAGBIO Magnolia biondii HOM05D006936 ORTHO05D008273 1.8e-36 156.8 198 48.5
BcaB03g12517 Brassica carinata HOM05D006936 ORTHO05D008273 2.3e-36 156.4 150 56.0
A01p18140 Brassica napus HOM05D006936 ORTHO05D008273 2.3e-36 156.4 161 52.2
A08p20640 Brassica napus HOM05D006936 ORTHO05D008273 3.0e-36 156.0 151 55.6
BraA08t34018Z Brassica rapa HOM05D006936 ORTHO05D008273 3.0e-36 156.0 129 62.0
C08p10070 Brassica napus HOM05D006936 ORTHO05D008273 3.9e-36 155.6 158 53.2
BolC8t48685H Brassica oleracea HOM05D006936 ORTHO05D008273 3.9e-36 155.6 158 53.2
C01p23100 Brassica napus HOM05D006936 ORTHO05D008273 5.1e-36 155.2 169 50.3
Peaxi162Scf00235g00220 Petunia axillaris HOM05D006936 ORTHO05D008273 6.7e-36 154.8 184 50.0
CAN.G337.138 Capsicum annuum HOM05D006936 ORTHO05D008273 1.1e-35 154.1 139 60.4
Lsat_1_v5_gn_9_93840 Lactuca sativa HOM05D006936 ORTHO05D008273 1.1e-35 154.1 145 59.3
BraA01t01769Z Brassica rapa HOM05D006936 ORTHO05D008273 2.5e-35 152.9 169 49.7
BolC1t02244H Brassica oleracea HOM05D006936 ORTHO05D008273 3.3e-35 152.5 164 50.0
ECA240G2843 Erigeron canadensis HOM05D006936 ORTHO05D008273 4.3e-35 152.1 129 64.3
Zm00001eb102230 Zea mays HOM05D006936 ORTHO05D008273 4.3e-35 152.1 135 57.0
Nn1g03514 Nelumbo nucifera HOM05D006936 ORTHO05D008273 2.1e-34 149.8 161 53.4
vmacro02233 Vaccinium macrocarpon HOM05D006936 ORTHO05D008273 8.1e-34 147.9 93 74.2
Sabra18G0079500 Salix brachista HOM05D006936 ORTHO05D008273 1.1e-30 137.5 112 62.5
FAN16G3045 Fragaria x ananassa HOM05D006936 ORTHO05D008273 3.2e-30 136.0 173 43.9
Hma1.2p1_0738F.1_g211130 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 3.9e-28 129.0 114 62.3
Aa31LG5G12010 Aethionema arabicum HOM05D006936 ORTHO05D008273 6.7e-28 128.3 126 51.6
Hma1.2p1_0738F.1_g211110 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 5.6e-27 125.2 74 77.0
MELO3C025377.2 Cucumis melo HOM05D006936 ORTHO05D008273 2.1e-26 123.2 146 50.0
Hund23239 Selenicereus undatus HOM05D006936 ORTHO05D008273 8.2e-26 121.3 178 42.1
CANSAT11G0469 Cannabis sativa HOM05D006936 ORTHO05D008273 2.4e-25 119.8 179 45.3
CARHR234570 Cardamine hirsuta HOM05D006936 ORTHO05D008273 2.4e-25 119.8 127 52.0
Os05g0538900 Oryza sativa ssp. japonica HOM05D006936 ORTHO05D008273 2.0e-24 116.7 86 64.0
Actinidia24797 Actinidia chinensis HOM05D006936 ORTHO05D008273 1.0e-23 114.4 126 51.6
Dinv40761 Davidia involucrata HOM05D006936 ORTHO05D008273 7.9e-21 104.8 104 59.6
Mapoly0093s0007 Marchantia polymorpha HOM05D006936 ORTHO05D008273 1.1e-19 100.9 167 39.5
Pp3c15_25830 Physcomitrium patens HOM05D006936 ORTHO05D008273 1.5e-19 100.5 163 36.8
AUR62020430 Chenopodium quinoa HOM05D006936 ORTHO05D008273 6.9e-17 91.7 201 34.8
SEGI_32271 Sequoiadendron giganteum HOM05D006301 ORTHO05D008273 1.1e-11 74.3 64 57.8
Hma1.2p1_0738F.1_g211140 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 5.9e-08 62.0 85 48.2
Hma1.2p1_2518F.1_g323762 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 5.9e-08 62.0 85 48.2
Cre09.g401150 Chlamydomonas reinhardtii HOM05D006936 ORTHO05D008273 7.2e-06 55.1 132 31.8


User provided reference genes

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