Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1094G001 Amborella trichopoda HOM05D006242 ORTHO05D007936 6.3e-117 424.1 211 100.0
Rhsim06G0063600 Rhododendron simsii HOM05D006242 ORTHO05D007936 3.3e-57 225.7 201 56.7
Dinv10532 Davidia involucrata HOM05D006242 ORTHO05D007936 1.6e-56 223.4 208 54.8
CSS0025117 Camellia sinensis var. sinensis HOM05D006242 ORTHO05D007936 3.7e-56 222.2 209 55.0
Prupe.4G115300 Prunus persica HOM05D006242 ORTHO05D007936 3.7e-56 222.2 203 56.2
Atru.chr10.429 Acer truncatum HOM05D006242 ORTHO05D007936 4.8e-56 221.9 208 54.8
Actinidia22421 Actinidia chinensis HOM05D006242 ORTHO05D007936 1.4e-55 220.3 208 53.8
Cpa.g.sc30.139 Carica papaya HOM05D006242 ORTHO05D007936 4.0e-55 218.8 208 52.9
DCAR_007782 Daucus carota HOM05D006242 ORTHO05D007936 5.3e-55 218.4 201 53.2
PSO541G0450 Papaver somniferum HOM05D006242 ORTHO05D007936 6.9e-55 218.0 208 53.8
CAN.G79.44 Capsicum annuum HOM05D006242 ORTHO05D007936 9.0e-55 217.6 209 55.5
MBI02_g26996_MAGBIO Magnolia biondii HOM05D006242 ORTHO05D007936 1.2e-54 217.2 200 54.5
PSO675G0930 Papaver somniferum HOM05D006242 ORTHO05D007936 1.5e-54 216.9 208 53.8
Cfa000677 Carpinus fangiana HOM05D006242 ORTHO05D007936 3.4e-54 215.7 208 53.4
Solyc02g031980.3 Solanum lycopersicum HOM05D006242 ORTHO05D007936 3.4e-54 215.7 214 52.3
Peaxi162Scf00198g01026 Petunia axillaris HOM05D006242 ORTHO05D007936 1.0e-53 214.2 213 53.1
MD10G1229500 Malus domestica HOM05D006242 ORTHO05D007936 1.3e-53 213.8 203 54.7
FAN25G2599 Fragaria x ananassa HOM05D006242 ORTHO05D007936 2.2e-53 213.0 210 51.9
PGSC0003DMG400014939 Solanum tuberosum HOM05D006242 ORTHO05D007936 2.9e-53 212.6 214 51.9
Haze_06141 Corylus avellana HOM05D006242 ORTHO05D007936 3.8e-53 212.2 208 53.4
FvH4_3g12650 Fragaria vesca HOM05D006242 ORTHO05D007936 4.9e-53 211.8 210 51.9
FAN21G1956 Fragaria x ananassa HOM05D006242 ORTHO05D007936 4.9e-53 211.8 210 52.4
GSVIVG01012122001 Vitis vinifera HOM05D006242 ORTHO05D007936 4.9e-53 211.8 208 51.4
ECA232G2813 Erigeron canadensis HOM05D006242 ORTHO05D007936 8.4e-53 211.1 208 51.4
CiPaw.09G074600 Carya illinoinensis HOM05D006242 ORTHO05D007936 1.1e-52 210.7 208 52.4
Duzib248G1438 Durio zibethinus HOM05D006242 ORTHO05D007936 1.1e-52 210.7 208 52.4
Lalb_Chr19g0129141 Lupinus albus HOM05D006242 ORTHO05D007936 1.1e-52 210.7 209 55.0
Manes.03G074100 Manihot esculenta HOM05D006242 ORTHO05D007936 1.9e-52 209.9 208 51.4
Sabra01G0132400 Salix brachista HOM05D006242 ORTHO05D007936 1.9e-52 209.9 204 53.9
RcHm_v2.0_Chr5g0020621 Rosa chinensis HOM05D006242 ORTHO05D007936 3.2e-52 209.1 210 51.4
TWI38G1455 Tripterygium wilfordii HOM05D006242 ORTHO05D007936 3.2e-52 209.1 209 50.7
Hma1.2p1_1499F.1_g287250 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 4.2e-52 208.8 209 49.8
CDE05G0364 Ceratophyllum demersum HOM05D006242 ORTHO05D007936 9.3e-52 207.6 203 53.2
QL11p013482 Quercus lobata HOM05D006242 ORTHO05D007936 2.1e-51 206.5 208 53.4
HanXRQChr12g0381511 Helianthus annuus HOM05D006242 ORTHO05D007936 2.7e-51 206.1 210 51.9
Oeu058943.1 Olea europaea HOM05D006242 ORTHO05D007936 2.7e-51 206.1 207 52.7
Potri.001G159600 Populus trichocarpa HOM05D006242 ORTHO05D007936 3.5e-51 205.7 204 53.4
Lj1A1147G28 Lonicera japonica HOM05D006242 ORTHO05D007936 4.6e-51 205.3 215 51.2
Thecc.02G006000 Theobroma cacao HOM05D006242 ORTHO05D007936 7.9e-51 204.5 210 50.0
TPR.G10622 Trifolium pratense HOM05D006242 ORTHO05D007936 7.9e-51 204.5 201 51.2
HanXRQChr12g0369481 Helianthus annuus HOM05D006242 ORTHO05D007936 1.0e-50 204.1 210 51.9
Medtr1g050428 Medicago truncatula HOM05D006242 ORTHO05D007936 1.8e-50 203.4 201 52.2
EL10Ac7g16757 Beta vulgaris HOM05D006242 ORTHO05D007936 3.9e-50 202.2 212 54.2
Nitab4.5_0008021g0020 Nicotiana tabacum HOM05D006242 ORTHO05D007936 3.9e-50 202.2 226 50.4
Ca_19722_v3 Cicer arietinum L. HOM05D006242 ORTHO05D007936 8.7e-50 201.1 201 52.7
Lsat_1_v5_gn_6_96480 Lactuca sativa HOM05D006242 ORTHO05D007936 8.7e-50 201.1 214 49.5
PGR004G2427 Punica granatum HOM05D006242 ORTHO05D007936 8.7e-50 201.1 212 50.5
SEGI_06259 Sequoiadendron giganteum HOM05D006242 ORTHO05D007936 1.1e-49 200.7 209 48.8
Cc00_g22870 Coffea canephora HOM05D006242 ORTHO05D007936 1.5e-49 200.3 209 52.2
Glyma.02G163900 Glycine max HOM05D006242 ORTHO05D007936 1.9e-49 199.9 201 53.7
Thhalv10017018m.g Eutrema salsugineum HOM05D006242 ORTHO05D007936 5.7e-49 198.4 208 49.0
Lj6g0025800 Lotus japonicus HOM05D006242 ORTHO05D007936 5.7e-49 198.4 200 53.0
Gohir.D12G047300 Gossypium hirsutum HOM05D006242 ORTHO05D007936 7.4e-49 198.0 213 49.3
Gorai.008G050000 Gossypium raimondii HOM05D006242 ORTHO05D007936 7.4e-49 198.0 213 49.3
THA.LOC104798560 Tarenaya hassleriana HOM05D006242 ORTHO05D007936 7.4e-49 198.0 211 47.4
CANSAT35G0032 Cannabis sativa HOM05D006242 ORTHO05D007936 1.3e-48 197.2 208 50.0
MSTRG.20044 Avicennia marina HOM05D006242 ORTHO05D007936 1.6e-48 196.8 202 51.0
Gohir.A12G048500 Gossypium hirsutum HOM05D006242 ORTHO05D007936 2.1e-48 196.4 213 48.4
Migut.K01175 Erythranthe guttata HOM05D006242 ORTHO05D007936 3.7e-48 195.7 200 50.5
FAN16G0457 Fragaria x ananassa HOM05D006242 ORTHO05D007936 8.2e-48 194.5 234 45.7
Zm00001eb233240 Zea mays HOM05D006242 ORTHO05D007936 1.1e-47 194.1 214 49.1
Eucgr.B01565 Eucalyptus grandis HOM05D006242 ORTHO05D007936 2.4e-47 193.0 200 50.0
SGA_v2.0_scaffold51G18672 Striga asiatica HOM05D006242 ORTHO05D007936 4.1e-47 192.2 200 48.5
A05p10660 Brassica napus HOM05D003281 ORTHO05D004128 6.9e-47 191.4 208 47.1
CARHR129200 Cardamine hirsuta HOM05D006242 ORTHO05D007936 1.2e-46 190.7 201 47.3
Cc09_g05610 Coffea canephora HOM05D006242 ORTHO05D007936 1.2e-46 190.7 202 52.5
TAR624G0344 Trochodendron aralioides HOM05D006242 ORTHO05D007936 1.2e-46 190.7 188 54.3
Aa31LG9G16170 Aethionema arabicum HOM05D003281 ORTHO05D004128 2.0e-46 189.9 207 48.3
SalBow7G3063 Salvia bowleyana HOM05D006242 ORTHO05D007936 3.4e-46 189.1 212 48.1
C04p13760 Brassica napus HOM05D003281 ORTHO05D004128 4.5e-46 188.7 208 47.1
BolC4t22966H Brassica oleracea HOM05D003281 ORTHO05D004128 4.5e-46 188.7 208 47.1
Carub.0004s1673 Capsella rubella HOM05D006242 ORTHO05D007936 4.5e-46 188.7 208 47.6
Sed0024740 Sechium edule HOM05D006242 ORTHO05D007936 2.9e-45 186.0 202 47.0
MELO3C007020.2 Cucumis melo HOM05D006242 ORTHO05D007936 3.8e-45 185.7 209 46.9
ClCG01G025640 Citrullus lanatus HOM05D006242 ORTHO05D007936 6.5e-45 184.9 208 47.1
CsaV3_6G052870 Cucumis sativus L. HOM05D006242 ORTHO05D007936 8.4e-45 184.5 209 47.4
Nitab4.5_0000138g0120 Nicotiana tabacum HOM05D006242 ORTHO05D007936 1.1e-44 184.1 214 48.1
AL4G31060 Arabidopsis lyrata HOM05D006242 ORTHO05D007936 2.5e-44 183.0 225 44.0
BcaC02g11584 Brassica carinata HOM05D006242 ORTHO05D007936 5.5e-44 181.8 207 46.4
Cc09_g05740 Coffea canephora HOM05D006242 ORTHO05D007936 7.1e-44 181.4 213 49.8
Ciclev10016161m.g Citrus clementina HOM05D006242 ORTHO05D007936 3.0e-42 176.0 177 51.4
COL.COLO4_17635 Corchorus olitorius HOM05D006242 ORTHO05D007936 5.1e-42 175.3 174 51.7
Psat6g094920 Pisum sativum HOM05D006242 ORTHO05D007936 4.1e-39 165.6 172 51.2
SMO203G0088 Selaginella moellendorffii HOM05D006242 ORTHO05D007936 1.3e-37 160.6 201 44.3
Mapoly0026s0041 Marchantia polymorpha HOM05D006242 ORTHO05D007936 1.9e-36 156.8 209 45.0
Sp2g07040 Schrenkiella parvula HOM05D006242 ORTHO05D007936 5.5e-36 155.2 172 47.1
Sc17g0004220 Simmondsia chinensis HOM05D006242 ORTHO05D007936 3.6e-35 152.5 173 48.0
arahy.Tifrunner.gnm1.ann1.VZGM4G Arachis hypogaea HOM05D006242 ORTHO05D007936 6.1e-35 151.8 165 51.5
Cc09_g05660 Coffea canephora HOM05D006242 ORTHO05D007936 8.8e-34 147.9 134 56.0
AagrBONN_evm.TU.Sc2ySwM_228.1028 Anthoceros agrestis HOM05D006242 ORTHO05D007936 2.0e-33 146.7 200 40.0
arahy.Tifrunner.gnm1.ann1.PA3R73 Arachis hypogaea HOM05D006242 ORTHO05D007936 2.0e-33 146.7 191 47.1
SpUn0157_0010 Schrenkiella parvula HOM05D006242 ORTHO05D007936 2.5e-33 146.4 185 43.2
Hma1.2p1_1700F.1_g298210 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 9.7e-33 144.4 158 48.7
Pp3c12_18460 Physcomitrium patens HOM05D006242 ORTHO05D007936 1.3e-32 144.1 209 38.3
Sopen02g010240 Solanum pennellii HOM05D006242 ORTHO05D007936 2.0e-30 136.7 114 57.9
Hma1.2p1_1499F.1_g287260 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 1.4e-28 130.6 113 55.8
Lj6g0012918 Lotus japonicus HOM05D006242 ORTHO05D007936 2.7e-27 126.3 105 60.0
AT2G35035 Arabidopsis thaliana HOM05D006242 ORTHO05D007936 7.9e-27 124.8 149 44.3
Nn7g38280 Nelumbo nucifera HOM05D006242 ORTHO05D007936 2.8e-24 116.3 124 50.8
Phvul.007G242500 Phaseolus vulgaris HOM05D006242 ORTHO05D007936 2.6e-22 109.8 81 63.0
VMungo0720G1734 Vigna mungo HOM05D006242 ORTHO05D007936 1.0e-21 107.8 78 65.4
BraA05t20007Z Brassica rapa HOM05D003281 ORTHO05D004128 1.3e-21 107.5 128 46.1
Cc09_g05680 Coffea canephora HOM05D006242 ORTHO05D007936 2.2e-21 106.7 84 60.7
HPP92_011012 Vanilla planifolia HOM05D006242 ORTHO05D007936 2.9e-21 106.3 125 47.2
AUR62040160 Chenopodium quinoa HOM05D006242 ORTHO05D007936 1.9e-20 103.6 85 58.8
CBR_g46754 Chara braunii HOM05D006242 ORTHO05D007936 9.4e-20 101.3 133 44.4
Cc09_g05630 Coffea canephora HOM05D006242 ORTHO05D007936 2.7e-19 99.8 150 42.0
Phvul.007G242466 Phaseolus vulgaris HOM05D006242 ORTHO05D007936 8.0e-19 98.2 109 48.6
unitig_37.g12020 Utricularia gibba HOM05D006242 ORTHO05D007936 8.0e-19 98.2 89 52.8
BcaB02g09486 Brassica carinata HOM05D006242 ORTHO05D007936 5.7e-17 92.0 101 47.5
VMungo0720G2601 Vigna mungo HOM05D006242 ORTHO05D007936 4.1e-15 85.9 98 46.9
Glyma.20G074000 Glycine max HOM05D006242 ORTHO05D007936 5.3e-15 85.5 82 53.7
AUR62040161 Chenopodium quinoa HOM05D006242 ORTHO05D007936 1.1e-12 77.8 92 44.6
PRCOL_00002215 Prasinoderma coloniale HOM05D005590 ORTHO05D007084 7.5e-09 65.1 100 36.0
CiPaw.09G216300 Carya illinoinensis HOM05D006242 ORTHO05D007936 9.1e-07 58.2 91 41.8


User provided reference genes

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