Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1093G035 Amborella trichopoda HOM05D002932 ORTHO05D003208 5.9e-109 397.5 195 100.0
Potri.012G035200 Populus trichocarpa HOM05D002932 ORTHO05D003208 6.0e-13 78.6 219 34.2
Potri.015G026600 Populus trichocarpa HOM05D002932 ORTHO05D003208 7.9e-13 78.2 216 34.7
TAR629G3108 Trochodendron aralioides HOM05D002932 ORTHO05D003208 2.3e-12 76.6 223 30.9
Actinidia08604 Actinidia chinensis HOM05D002932 ORTHO05D003208 3.9e-12 75.9 223 32.7
Sabra12G0024300 Salix brachista HOM05D002932 ORTHO05D003208 5.1e-12 75.5 219 34.7
Actinidia03151 Actinidia chinensis HOM05D002932 ORTHO05D003208 6.7e-12 75.1 217 32.7
CSS0021611 Camellia sinensis var. sinensis HOM05D002932 ORTHO05D003208 1.5e-11 73.9 213 34.7
MBI07_g44813_MAGBIO Magnolia biondii HOM05D002932 ORTHO05D003208 1.5e-11 73.9 219 32.9
Dinv35290 Davidia involucrata HOM05D002932 ORTHO05D003208 4.3e-11 72.4 221 32.1
Sabra15G0019600 Salix brachista HOM05D002932 ORTHO05D003208 4.3e-11 72.4 218 32.6
Manes.06G154700 Manihot esculenta HOM05D002932 ORTHO05D003208 7.4e-11 71.6 216 32.9
Sabra15G0022400 Salix brachista HOM05D002932 ORTHO05D003208 7.4e-11 71.6 218 32.1
TWI14G1190 Tripterygium wilfordii HOM05D002932 ORTHO05D003208 1.3e-10 70.9 217 31.8
TWI23G0695 Tripterygium wilfordii HOM05D002932 ORTHO05D003208 3.7e-10 69.3 219 32.0
COL.COLO4_30256 Corchorus olitorius HOM05D002932 ORTHO05D003208 4.8e-10 68.9 220 33.2
Manes.14G020200 Manihot esculenta HOM05D002932 ORTHO05D003208 4.8e-10 68.9 219 32.4
Dinv28362 Davidia involucrata HOM05D002932 ORTHO05D003208 6.2e-10 68.6 218 33.0
Lalb_Chr03g0035141 Lupinus albus HOM05D002932 ORTHO05D003208 3.1e-09 66.2 219 32.4
Thecc.03G188500 Theobroma cacao HOM05D002932 ORTHO05D003208 4.0e-09 65.9 221 31.7
Cpa.g.sc3.12 Carica papaya HOM05D002932 ORTHO05D003208 5.3e-09 65.5 220 32.7
Glyma.20G164000 Glycine max HOM05D002932 ORTHO05D003208 6.9e-09 65.1 216 32.4
Duzib084G0326 Durio zibethinus HOM05D002932 ORTHO05D003208 2.0e-08 63.5 222 32.0
Lalb_Chr01g0009541 Lupinus albus HOM05D002932 ORTHO05D003208 2.0e-08 63.5 221 32.1
QL09p012032 Quercus lobata HOM05D002932 ORTHO05D003208 2.0e-08 63.5 226 31.4
Hma1.2p1_0142F.1_g064300 Hydrangea macrophylla HOM05D002932 ORTHO05D003208 2.6e-08 63.2 220 32.7
VMungo0720G0620 Vigna mungo HOM05D002932 ORTHO05D003208 2.6e-08 63.2 215 31.6
Phvul.007G077100 Phaseolus vulgaris HOM05D002932 ORTHO05D003208 5.8e-08 62.0 214 31.8
RcHm_v2.0_Chr1g0379591 Rosa chinensis HOM05D002932 ORTHO05D003208 7.6e-08 61.6 226 31.9
Glyma.10G229200 Glycine max HOM05D002932 ORTHO05D003208 1.7e-07 60.5 221 32.6
FvH4_7g30650 Fragaria vesca HOM05D002932 ORTHO05D003208 2.2e-07 60.1 227 30.4
FAN06G0995 Fragaria x ananassa HOM05D002932 ORTHO05D003208 2.2e-07 60.1 227 30.4
FAN10G0880 Fragaria x ananassa HOM05D002932 ORTHO05D003208 2.2e-07 60.1 227 30.4
FAN10G1573 Fragaria x ananassa HOM05D002932 ORTHO05D003208 2.2e-07 60.1 227 30.4
vmacro06597 Vaccinium macrocarpon HOM05D002932 ORTHO05D003208 2.2e-07 60.1 218 28.4
Eucgr.A02685 Eucalyptus grandis HOM05D002932 ORTHO05D003208 2.9e-07 59.7 220 31.8
TAR636G0499 Trochodendron aralioides HOM05D002932 ORTHO05D003208 2.9e-07 59.7 217 30.4
Cfa016327 Carpinus fangiana HOM05D002932 ORTHO05D003208 4.9e-07 58.9 235 31.9
Haze_00079 Corylus avellana HOM05D002932 ORTHO05D003208 6.5e-07 58.5 226 31.4
Duzib068G0647 Durio zibethinus HOM05D002932 ORTHO05D003208 1.1e-06 57.8 211 29.9
FAN03G0587 Fragaria x ananassa HOM05D002932 ORTHO05D003208 1.1e-06 57.8 229 29.3
Migut.F00261 Erythranthe guttata HOM05D002932 ORTHO05D003208 1.4e-06 57.4 226 31.9
Glyma.09G126400 Glycine max HOM05D002932 ORTHO05D003208 1.4e-06 57.4 215 32.6
Gohir.A12G254433 Gossypium hirsutum HOM05D002932 ORTHO05D003208 1.4e-06 57.4 217 31.3
CANSAT21G2430 Cannabis sativa HOM05D002932 ORTHO05D003208 1.9e-06 57.0 228 30.3
ClCG01G000790 Citrullus lanatus HOM05D002932 ORTHO05D003208 3.2e-06 56.2 226 30.1
MD01G1211600 Malus domestica HOM05D002932 ORTHO05D003208 3.2e-06 56.2 237 30.0
VMungo0464G0277 Vigna mungo HOM05D002932 ORTHO05D003208 3.2e-06 56.2 213 30.0
Phvul.004G102700 Phaseolus vulgaris HOM05D002932 ORTHO05D003208 4.2e-06 55.8 215 31.6
PGR042G1004 Punica granatum HOM05D002932 ORTHO05D003208 4.2e-06 55.8 220 28.6
MELO3C005851.2 Cucumis melo HOM05D002932 ORTHO05D003208 9.3e-06 54.7 218 31.7


User provided reference genes

Program Settings