Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1093G023 Amborella trichopoda HOM05D006558 ORTHO05D008424 0.0e+00 1077.4 542 100.0
MBI13_g29518_MAGBIO Magnolia biondii HOM05D006558 ORTHO05D008424 5.9e-151 538.5 552 49.5
TAR633G1807 Trochodendron aralioides HOM05D006558 ORTHO05D008424 2.9e-150 536.2 555 52.1
GSVIVG01000827001 Vitis vinifera HOM05D006558 ORTHO05D008424 2.7e-143 513.1 550 49.1
Aqoxy2G03825 Aquilegia oxysepala HOM05D006558 ORTHO05D008424 7.5e-138 495.0 550 47.1
Aqoxy5G01848 Aquilegia oxysepala HOM05D006558 ORTHO05D008424 4.9e-137 492.3 550 46.9
Dinv09252 Davidia involucrata HOM05D006558 ORTHO05D008424 1.2e-135 487.6 572 47.0
Nn7g37154 Nelumbo nucifera HOM05D006558 ORTHO05D008424 1.6e-135 487.3 556 46.4
QL04p014186 Quercus lobata HOM05D006558 ORTHO05D008424 3.0e-134 483.0 549 47.2
Prupe.2G031500 Prunus persica HOM05D006558 ORTHO05D008424 1.6e-132 477.2 549 47.0
Ciclev10033512m.g Citrus clementina HOM05D006558 ORTHO05D008424 2.3e-131 473.4 548 46.0
Gohir.D06G185500 Gossypium hirsutum HOM05D006558 ORTHO05D008424 5.2e-131 472.2 548 46.9
CiPaw.13G011700 Carya illinoinensis HOM05D006558 ORTHO05D008424 1.5e-130 470.7 544 46.1
Gorai.010G217100 Gossypium raimondii HOM05D006558 ORTHO05D008424 4.4e-130 469.2 548 46.7
HanXRQChr02g0050141 Helianthus annuus HOM05D006558 ORTHO05D008424 1.1e-128 464.5 543 45.3
Potri.004G236000 Populus trichocarpa HOM05D006558 ORTHO05D008424 3.2e-128 463.0 550 44.7
Actinidia06260 Actinidia chinensis HOM05D006558 ORTHO05D008424 5.4e-128 462.2 553 44.3
RcHm_v2.0_Chr1g0321321 Rosa chinensis HOM05D006558 ORTHO05D008424 1.0e-126 458.0 551 44.1
Dinv00935 Davidia involucrata HOM05D006558 ORTHO05D008424 3.9e-126 456.1 549 47.0
ECA248G1764 Erigeron canadensis HOM05D006558 ORTHO05D008424 2.1e-124 450.3 546 44.7
FvH4_7g02620 Fragaria vesca HOM05D006558 ORTHO05D008424 6.2e-124 448.7 553 43.9
Rhsim07G0065000 Rhododendron simsii HOM05D006558 ORTHO05D008424 8.1e-124 448.4 563 44.4
TWI15G0624 Tripterygium wilfordii HOM05D006558 ORTHO05D008424 4.0e-123 446.0 550 43.1
Lj9C648T3 Lonicera japonica HOM05D006558 ORTHO05D008424 1.2e-122 444.5 550 45.8
Duzib106G1800 Durio zibethinus HOM05D006558 ORTHO05D008424 1.5e-122 444.1 522 45.4
Ca_25408_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 2.0e-122 443.7 535 43.4
Ca_25460_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 2.0e-122 443.7 543 43.5
Manes.12G022900 Manihot esculenta HOM05D006558 ORTHO05D008424 4.4e-122 442.6 555 44.0
FAN03G0498 Fragaria x ananassa HOM05D006558 ORTHO05D008424 9.8e-122 441.4 568 43.1
Sed0005595 Sechium edule HOM05D006558 ORTHO05D008424 9.8e-122 441.4 544 44.7
FAN01G2130 Fragaria x ananassa HOM05D006558 ORTHO05D008424 1.3e-121 441.0 568 43.0
Lalb_Chr25g0282291 Lupinus albus HOM05D006558 ORTHO05D008424 3.7e-121 439.5 548 43.4
HPP92_012099 Vanilla planifolia HOM05D006558 ORTHO05D008424 3.7e-121 439.5 563 44.2
TPR.G9868 Trifolium pratense HOM05D006558 ORTHO05D008424 2.4e-120 436.8 541 42.9
CANSAT78G2064 Cannabis sativa HOM05D006558 ORTHO05D008424 3.5e-119 433.0 541 44.5
CANSAT78G0292 Cannabis sativa HOM05D006558 ORTHO05D008424 6.0e-119 432.2 541 44.7
Lj3g0026268 Lotus japonicus HOM05D006558 ORTHO05D008424 1.3e-118 431.0 551 42.8
MELO3C016629.2 Cucumis melo HOM05D006558 ORTHO05D008424 2.3e-118 430.3 546 42.7
CsaV3_5G011280 Cucumis sativus L. HOM05D006558 ORTHO05D008424 5.1e-118 429.1 545 43.1
Psat5g217480 Pisum sativum HOM05D006558 ORTHO05D008424 1.5e-117 427.6 550 42.4
Haze_03062 Corylus avellana HOM05D006558 ORTHO05D008424 1.9e-117 427.2 545 43.7
AL3G18860 Arabidopsis lyrata HOM05D006558 ORTHO05D008424 2.8e-116 423.3 544 42.1
Thhalv10020176m.g Eutrema salsugineum HOM05D006558 ORTHO05D008424 6.2e-116 422.2 548 42.0
Sp3g06440 Schrenkiella parvula HOM05D006558 ORTHO05D008424 6.2e-116 422.2 552 41.8
THA.LOC104826716 Tarenaya hassleriana HOM05D006558 ORTHO05D008424 1.1e-115 421.4 550 42.5
PGR031G1286 Punica granatum HOM05D006558 ORTHO05D008424 2.3e-115 420.2 548 40.9
Aa31LG10G8390 Aethionema arabicum HOM05D006558 ORTHO05D008424 4.0e-115 419.5 549 41.7
Peaxi162Scf00516g00328 Petunia axillaris HOM05D006558 ORTHO05D008424 8.9e-115 418.3 539 44.0
Phvul.002G285400 Phaseolus vulgaris HOM05D006558 ORTHO05D008424 8.9e-115 418.3 545 40.6
AT3G07530 Arabidopsis thaliana HOM05D006558 ORTHO05D008424 1.5e-114 417.5 544 41.9
VMungo0251G1905 Vigna mungo HOM05D006558 ORTHO05D008424 4.4e-114 416.0 544 40.8
Sc11g0006630 Simmondsia chinensis HOM05D006558 ORTHO05D008424 1.7e-113 414.1 543 41.1
AUR62037214 Chenopodium quinoa HOM05D006558 ORTHO05D008424 2.2e-113 413.7 548 42.7
A05p40680 Brassica napus HOM05D006558 ORTHO05D008424 2.9e-113 413.3 545 41.7
Glyma.11G153500 Glycine max HOM05D006558 ORTHO05D008424 3.8e-113 412.9 546 41.4
Oeu006113.1 Olea europaea HOM05D006558 ORTHO05D008424 4.9e-113 412.5 544 42.8
SHI03978 Sapria himalayana HOM05D006558 ORTHO05D005892 2.4e-112 410.2 557 42.2
EL10Ac2g02834 Beta vulgaris HOM05D006558 ORTHO05D009340 3.2e-112 409.8 542 41.9
AUR62026839 Chenopodium quinoa HOM05D006558 ORTHO05D008424 2.1e-111 407.1 544 41.7
vmacro13739 Vaccinium macrocarpon HOM05D006558 ORTHO05D008424 2.7e-111 406.8 496 43.8
C05p59790 Brassica napus HOM05D006558 ORTHO05D008424 3.5e-111 406.4 549 41.2
SGA_v2.0_scaffold232G43518 Striga asiatica HOM05D006558 ORTHO05D008424 6.6e-110 402.1 544 40.8
BraA05t22799Z Brassica rapa HOM05D006558 ORTHO05D008424 8.1e-108 395.2 563 39.6
Lsat_1_v5_gn_1_114420 Lactuca sativa HOM05D006558 ORTHO05D008424 1.4e-107 394.4 545 41.3
Cc07_g20890 Coffea canephora HOM05D006558 ORTHO05D008424 1.5e-106 391.0 551 39.4
Carub.0003s0708 Capsella rubella HOM05D006558 ORTHO05D008424 3.4e-106 389.8 550 40.2
BolC5t34633H Brassica oleracea HOM05D006558 ORTHO05D008424 4.4e-106 389.4 564 39.7
Medtr3g019010 Medicago truncatula HOM05D006558 ORTHO05D008424 7.6e-106 388.7 568 38.2
Sopen03g028230 Solanum pennellii HOM05D006558 ORTHO05D008424 1.3e-105 387.9 537 41.2
BcaC05g29545 Brassica carinata HOM05D006558 ORTHO05D008424 3.8e-105 386.3 549 40.1
PSO675G8563 Papaver somniferum HOM05D006558 ORTHO05D008424 3.2e-104 383.3 552 39.5
Zm00001eb143980 Zea mays HOM05D006558 ORTHO05D008424 4.2e-104 382.9 535 39.6
Nitab4.5_0002530g0080 Nicotiana tabacum HOM05D006558 ORTHO05D008424 5.4e-104 382.5 528 42.0
Solyc03g097460.3 Solanum lycopersicum HOM05D006558 ORTHO05D008424 4.6e-103 379.4 538 40.7
Ah.10g030940 Amaranthus hybridus HOM05D006558 ORTHO05D008424 2.3e-102 377.1 414 47.6
MD00G1214500 Malus domestica HOM05D006558 ORTHO05D008424 8.7e-102 375.2 334 54.2
CAN.G732.14 Capsicum annuum HOM05D006558 ORTHO05D008424 2.5e-101 373.6 543 40.5
Gohir.A06G175900 Gossypium hirsutum HOM05D006558 ORTHO05D008424 1.1e-99 368.2 474 44.5
PGSC0003DMG400031735 Solanum tuberosum HOM05D006558 ORTHO05D008424 6.9e-99 365.5 526 40.1
arahy.Tifrunner.gnm1.ann1.898F3G Arachis hypogaea HOM05D006558 ORTHO05D008424 2.6e-98 363.6 540 38.3
arahy.Tifrunner.gnm1.ann1.S73JQ5 Arachis hypogaea HOM05D006558 ORTHO05D008424 7.1e-96 355.5 541 38.1
Nitab4.5_0000021g1060 Nicotiana tabacum HOM05D006558 ORTHO05D008424 1.9e-93 347.4 586 37.4
Psat5g217880 Pisum sativum HOM05D006558 ORTHO05D008424 3.6e-92 343.2 323 52.0
DCAR_010372 Daucus carota HOM05D006558 ORTHO05D008424 7.6e-90 335.5 325 49.2
CARHR082190 Cardamine hirsuta HOM05D006558 ORTHO05D008424 3.8e-89 333.2 324 51.2
Migut.K00935 Erythranthe guttata HOM05D006558 ORTHO05D008424 7.9e-87 325.5 444 43.7
AL908U10010 Arabidopsis lyrata HOM05D006558 ORTHO05D008424 7.4e-85 318.9 423 42.6
Hund15718 Selenicereus undatus HOM05D006558 ORTHO05D008424 6.2e-84 315.8 600 35.3
Atru.chr11.2434 Acer truncatum HOM05D006558 ORTHO05D008424 5.3e-75 286.2 266 53.0
SEGI_06522 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 3.4e-74 283.5 423 38.3
unitig_32.g11142 Utricularia gibba HOM05D006558 ORTHO05D008424 2.9e-73 280.4 421 39.0
Cpa.g.sc96.50 Carica papaya HOM05D006558 ORTHO05D008424 2.8e-68 263.8 252 52.0
Mapoly0001s0524 Marchantia polymorpha HOM05D006558 ORTHO05D008424 1.8e-67 261.2 624 28.8
Thecc.10G170400 Theobroma cacao HOM05D006558 ORTHO05D008424 3.1e-67 260.4 251 52.2
Sabra01G0180400 Salix brachista HOM05D006558 ORTHO05D008424 4.5e-66 256.5 257 50.2
Pp3c9_4730 Physcomitrium patens HOM05D006558 ORTHO05D008424 1.4e-62 245.0 618 29.6
CDE05G1491 Ceratophyllum demersum HOM05D006558 ORTHO05D008424 1.4e-59 235.0 543 30.8
AagrBONN_evm.TU.Sc2ySwM_228.965 Anthoceros agrestis HOM05D006558 ORTHO05D008424 4.1e-59 233.4 612 27.6
SMO229G0006 Selaginella moellendorffii HOM05D006558 ORTHO05D008424 2.0e-58 231.1 559 31.7
SMO144G0043 Selaginella moellendorffii HOM05D006558 ORTHO05D008424 4.5e-58 229.9 559 31.5
Eucgr.H05132 Eucalyptus grandis HOM05D006558 ORTHO05D008424 2.2e-52 211.1 549 29.9
Eucgr.H05138 Eucalyptus grandis HOM05D006558 ORTHO05D008424 1.6e-42 178.3 355 32.7
COL.COLO4_35437 Corchorus olitorius HOM05D006558 ORTHO05D008424 2.0e-42 177.9 367 31.6
CBR_g72661 Chara braunii HOM05D000019 ORTHO05D000353 2.3e-33 147.9 313 32.9
Cpa.g.sc96.48 Carica papaya HOM05D006558 ORTHO05D008424 3.6e-31 140.6 253 36.4
Cc02_g29630 Coffea canephora HOM05D006558 ORTHO05D008424 3.0e-30 137.5 131 48.1
SEGI_36037 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 2.2e-28 131.3 246 37.4
DCAR_010374 Daucus carota HOM05D006558 ORTHO05D008424 8.6e-25 119.4 227 34.8
SEGI_00327 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 9.5e-24 115.9 78 64.1
Atru.chr11.2433 Acer truncatum HOM05D006558 ORTHO05D008424 1.0e-22 112.5 182 36.8
SGA_v2.0_scaffold2G00943 Striga asiatica HOM05D006558 ORTHO05D008424 2.0e-21 108.2 208 35.1
Gohir.A06G175902 Gossypium hirsutum HOM05D006558 ORTHO05D008424 1.1e-14 85.9 58 63.8
MD07G1035200 Malus domestica HOM05D006558 ORTHO05D008424 1.5e-08 65.5 109 37.6


User provided reference genes

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