Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1093G019 Amborella trichopoda HOM05D006544 ORTHO05D008757 3.3e-118 428.3 210 100.0
MBI18_g04983_MAGBIO Magnolia biondii HOM05D006544 ORTHO05D008757 1.4e-87 326.6 213 74.2
Gohir.A09G147100 Gossypium hirsutum HOM05D006544 ORTHO05D008757 1.7e-85 319.7 203 74.4
Gohir.D09G142700 Gossypium hirsutum HOM05D006544 ORTHO05D008757 8.3e-85 317.4 203 73.4
RcHm_v2.0_Chr3g0470171 Rosa chinensis HOM05D006544 ORTHO05D008757 3.2e-84 315.5 203 75.9
DCAR_020819 Daucus carota HOM05D006544 ORTHO05D008757 4.1e-84 315.1 210 72.4
Thecc.05G065700 Theobroma cacao HOM05D006544 ORTHO05D008757 1.2e-83 313.5 210 72.4
TAR636G3123 Trochodendron aralioides HOM05D006544 ORTHO05D008757 1.2e-83 313.5 185 79.5
Gorai.006G164200 Gossypium raimondii HOM05D006544 ORTHO05D008757 6.0e-83 311.2 208 71.6
Duzib093G0756 Durio zibethinus HOM05D006544 ORTHO05D008757 7.8e-83 310.8 210 71.4
Nn2g11585 Nelumbo nucifera HOM05D006544 ORTHO05D008757 1.0e-82 310.5 187 78.1
Actinidia28904 Actinidia chinensis HOM05D006544 ORTHO05D008757 1.3e-82 310.1 185 76.8
PSO339G0933 Papaver somniferum HOM05D006544 ORTHO05D008757 3.9e-82 308.5 203 72.4
FvH4_6g16320 Fragaria vesca HOM05D006544 ORTHO05D008757 5.0e-82 308.1 181 80.1
Potri.016G092300 Populus trichocarpa HOM05D006544 ORTHO05D008757 8.6e-82 307.4 216 70.4
PSO801G0526 Papaver somniferum HOM05D006544 ORTHO05D008757 1.9e-81 306.2 203 71.9
AT5G52970 Arabidopsis thaliana HOM05D006544 ORTHO05D008757 3.3e-81 305.4 206 73.3
Sc02g0001640 Simmondsia chinensis HOM05D006544 ORTHO05D008757 3.3e-81 305.4 199 71.9
PGSC0003DMG400010472 Solanum tuberosum HOM05D006544 ORTHO05D008757 4.3e-81 305.1 177 80.2
AL8G27480 Arabidopsis lyrata HOM05D006544 ORTHO05D008757 7.3e-81 304.3 183 78.7
FAN09G3810 Fragaria x ananassa HOM05D006544 ORTHO05D008757 7.3e-81 304.3 204 74.5
CAN.G1169.17 Capsicum annuum HOM05D006544 ORTHO05D008757 9.5e-81 303.9 177 79.7
TWI74G1602 Tripterygium wilfordii HOM05D006544 ORTHO05D008757 9.5e-81 303.9 203 71.9
Ciclev10012670m.g Citrus clementina HOM05D006544 ORTHO05D008757 1.6e-80 303.1 184 76.1
Dinv37314 Davidia involucrata HOM05D006544 ORTHO05D008757 1.6e-80 303.1 221 67.4
FAN05G5519 Fragaria x ananassa HOM05D006544 ORTHO05D008757 2.1e-80 302.8 185 78.9
Nitab4.5_0000063g0030 Nicotiana tabacum HOM05D006544 ORTHO05D008757 2.1e-80 302.8 180 77.2
HanXRQChr13g0401051 Helianthus annuus HOM05D006544 ORTHO05D008757 3.6e-80 302.0 201 71.6
Lalb_Chr06g0171711 Lupinus albus HOM05D006544 ORTHO05D008757 3.6e-80 302.0 210 71.0
Sp6g39380 Schrenkiella parvula HOM05D006544 ORTHO05D008757 4.7e-80 301.6 183 78.1
THA.LOC104816347 Tarenaya hassleriana HOM05D006544 ORTHO05D008757 4.7e-80 301.6 206 70.9
QL07p043583 Quercus lobata HOM05D006544 ORTHO05D008757 6.2e-80 301.2 183 77.0
Thhalv10014610m.g Eutrema salsugineum HOM05D006544 ORTHO05D008757 1.4e-79 300.1 177 80.8
MD12G1113500 Malus domestica HOM05D006544 ORTHO05D008757 1.4e-79 300.1 185 75.1
Solyc10g084040.2 Solanum lycopersicum HOM05D006544 ORTHO05D008757 1.8e-79 299.7 177 78.5
Sopen10g033470 Solanum pennellii HOM05D006544 ORTHO05D008757 1.8e-79 299.7 177 78.5
Carub.0008s1316 Capsella rubella HOM05D006544 ORTHO05D008757 2.3e-79 299.3 208 70.2
ClCG04G009280 Citrullus lanatus HOM05D006544 ORTHO05D008757 2.3e-79 299.3 175 80.0
COL.COLO4_26969 Corchorus olitorius HOM05D006544 ORTHO05D008757 2.3e-79 299.3 237 64.1
GSVIVG01025731001 Vitis vinifera HOM05D006544 ORTHO05D008757 3.1e-79 298.9 212 69.3
BcaC03g13011 Brassica carinata HOM05D006544 ORTHO05D008757 5.2e-79 298.1 180 80.0
Cc06_g04210 Coffea canephora HOM05D006544 ORTHO05D008757 5.2e-79 298.1 184 76.6
Sed0018427 Sechium edule HOM05D006544 ORTHO05D008757 5.2e-79 298.1 209 69.9
Aa31LG1G21780 Aethionema arabicum HOM05D006544 ORTHO05D008757 1.5e-78 296.6 205 71.2
CiPaw.09G172700 Carya illinoinensis HOM05D006544 ORTHO05D008757 1.5e-78 296.6 179 77.7
Lsat_1_v5_gn_6_25121 Lactuca sativa HOM05D006544 ORTHO05D008757 2.6e-78 295.8 201 69.7
Lj5g0006333 Lotus japonicus HOM05D006544 ORTHO05D008757 3.4e-78 295.4 207 71.5
CsaV3_6G039870 Cucumis sativus L. HOM05D006544 ORTHO05D008757 4.4e-78 295.0 174 78.7
PGR004G0128 Punica granatum HOM05D006544 ORTHO05D008757 4.4e-78 295.0 199 71.9
ECA233G4064 Erigeron canadensis HOM05D006544 ORTHO05D008757 7.5e-78 294.3 170 81.2
C02p01030 Brassica napus HOM05D006544 ORTHO05D008757 1.3e-77 293.5 181 79.6
CANSAT80G1747 Cannabis sativa HOM05D006544 ORTHO05D008757 1.3e-77 293.5 189 73.0
BcaB05g21832 Brassica carinata HOM05D006544 ORTHO05D008757 1.7e-77 293.1 206 70.4
MELO3C024463.2 Cucumis melo HOM05D006544 ORTHO05D008757 1.7e-77 293.1 172 79.1
BolC2t06093H Brassica oleracea HOM05D006544 ORTHO05D008757 3.7e-77 292.0 181 79.0
Cfa017605 Carpinus fangiana HOM05D006544 ORTHO05D008757 4.9e-77 291.6 207 70.0
SalBow5G2848 Salvia bowleyana HOM05D006544 ORTHO05D008757 4.9e-77 291.6 188 72.9
SGA_v2.0_scaffold224G42946 Striga asiatica HOM05D006544 ORTHO05D008757 4.9e-77 291.6 207 67.6
Oeu016983.1 Olea europaea HOM05D006544 ORTHO05D008757 1.1e-76 290.4 192 72.4
Aqoxy2G01774 Aquilegia oxysepala HOM05D006544 ORTHO05D008757 1.4e-76 290.0 184 76.1
Eucgr.A01683 Eucalyptus grandis HOM05D006544 ORTHO05D008757 1.9e-76 289.7 172 79.1
CDE09G0170 Ceratophyllum demersum HOM05D006544 ORTHO05D008757 3.2e-76 288.9 185 71.9
Migut.L01701 Erythranthe guttata HOM05D006544 ORTHO05D008757 3.2e-76 288.9 190 73.7
Nitab4.5_0010279g0020 Nicotiana tabacum HOM05D006544 ORTHO05D008757 3.2e-76 288.9 204 68.6
Manes.09G066600 Manihot esculenta HOM05D006544 ORTHO05D008757 4.1e-76 288.5 199 71.4
Peaxi162Scf00311g00059 Petunia axillaris HOM05D006544 ORTHO05D008757 7.1e-76 287.7 200 69.5
MSTRG.10320 Avicennia marina HOM05D006544 ORTHO05D008757 1.6e-75 286.6 179 74.3
Medtr1g063350 Medicago truncatula HOM05D006544 ORTHO05D008757 1.6e-75 286.6 176 76.7
CARHR265950 Cardamine hirsuta HOM05D006544 ORTHO05D008757 2.7e-75 285.8 212 67.5
FAN14G3080 Fragaria x ananassa HOM05D006544 ORTHO05D008757 6.0e-75 284.6 165 82.4
unitig_578.g16041 Utricularia gibba HOM05D006544 ORTHO05D008757 1.0e-74 283.9 182 72.0
Glyma.10G056700 Glycine max HOM05D006544 ORTHO05D008757 1.7e-74 283.1 175 77.1
Phvul.007G219800 Phaseolus vulgaris HOM05D006544 ORTHO05D008757 6.6e-74 281.2 174 76.4
HPP92_009890 Vanilla planifolia HOM05D006544 ORTHO05D008757 6.6e-74 281.2 183 74.9
BraA02t04758Z Brassica rapa HOM05D006544 ORTHO05D008757 8.6e-74 280.8 182 74.2
Ca_11495_v3 Cicer arietinum L. HOM05D006544 ORTHO05D008757 8.6e-74 280.8 175 76.6
TPR.G11258 Trifolium pratense HOM05D006544 ORTHO05D008757 8.6e-74 280.8 175 76.6
arahy.Tifrunner.gnm1.ann1.4P9CL0 Arachis hypogaea HOM05D006544 ORTHO05D008757 1.9e-73 279.6 174 75.3
arahy.Tifrunner.gnm1.ann1.8Z8BZM Arachis hypogaea HOM05D006544 ORTHO05D008757 1.9e-73 279.6 174 75.3
EL10Ac7g16625 Beta vulgaris HOM05D006544 ORTHO05D008757 2.5e-73 279.3 195 68.2
Psat6g072960 Pisum sativum HOM05D006544 ORTHO05D008757 2.5e-73 279.3 175 75.4
VMungo0720G1694 Vigna mungo HOM05D006544 ORTHO05D008757 2.5e-73 279.3 178 76.4
SEGI_38453 Sequoiadendron giganteum HOM05D006544 ORTHO05D008757 1.2e-72 276.9 171 75.4
vmacro07290 Vaccinium macrocarpon HOM05D006544 ORTHO05D008757 2.8e-72 275.8 154 81.2
Lj2A122G33 Lonicera japonica HOM05D006544 ORTHO05D008757 4.7e-72 275.0 156 81.4
Zm00001eb088350 Zea mays HOM05D006544 ORTHO05D008757 1.1e-71 273.9 168 75.0
AUR62042496 Chenopodium quinoa HOM05D006544 ORTHO05D008757 1.2e-70 270.4 220 61.8
AUR62040358 Chenopodium quinoa HOM05D006544 ORTHO05D008757 2.6e-70 269.2 160 76.9
Sabra16G0097900 Salix brachista HOM05D006544 ORTHO05D008757 1.7e-69 266.5 310 50.0
Ah.15g092510 Amaranthus hybridus HOM05D006544 ORTHO05D008757 2.2e-69 266.2 152 79.6
Mapoly0064s0090 Marchantia polymorpha HOM05D006544 ORTHO05D008757 3.0e-66 255.8 187 66.8
Prupe.6G232400 Prunus persica HOM05D006544 ORTHO05D008757 2.5e-65 252.7 162 74.7
Pp3c13_11800 Physcomitrium patens HOM05D006544 ORTHO05D008757 8.9e-63 244.2 170 69.4
Rhsim03G0092100 Rhododendron simsii HOM05D006544 ORTHO05D008757 1.3e-61 240.4 237 52.7
SMO118G0079 Selaginella moellendorffii HOM05D006544 ORTHO05D008757 1.3e-61 240.4 147 75.5
AagrBONN_evm.TU.Sc2ySwM_228.4577 Anthoceros agrestis HOM05D006544 ORTHO05D008757 1.2e-59 233.8 157 72.0
Cpa.g.sc54.75 Carica papaya HOM05D006544 ORTHO05D008757 3.3e-57 225.7 118 85.6
CBR_g11899 Chara braunii HOM05D006544 ORTHO05D008757 2.8e-56 222.6 168 64.9
Cre15.g636050 Chlamydomonas reinhardtii HOM05D006544 ORTHO05D008757 1.8e-55 219.9 170 63.5
SEGI_20985 Sequoiadendron giganteum HOM05D006544 ORTHO05D008757 6.9e-55 218.0 122 80.3
AagrBONN_evm.TU.Sc2ySwM_344.816 Anthoceros agrestis HOM05D006544 ORTHO05D008757 2.1e-51 206.5 122 76.2
MCO09G250 Micromonas commoda HOM05D006544 ORTHO05D008757 1.9e-49 199.9 167 58.7
PRCOL_00002491 Prasinoderma coloniale HOM05D006544 ORTHO05D008757 2.1e-48 196.4 172 56.4
Os07g0534000 Oryza sativa ssp. japonica HOM05D006544 ORTHO05D008757 4.6e-43 178.7 118 68.6
Cpa.g.sc4277.1 Carica papaya HOM05D006544 ORTHO05D008757 3.9e-42 175.6 115 73.9
Cpa.g.sc54.73 Carica papaya HOM05D006544 ORTHO05D008757 3.9e-42 175.6 115 73.9
CSS0000889 Camellia sinensis var. sinensis HOM05D006544 ORTHO05D008757 3.3e-41 172.6 179 52.5
Lj5g0024591 Lotus japonicus HOM05D006544 ORTHO05D008757 1.3e-40 170.6 94 79.8
Medtr5g037320 Medicago truncatula HOM05D006544 ORTHO05D008757 2.5e-25 119.8 90 70.0
HPP92_009894 Vanilla planifolia HOM05D006544 ORTHO05D008757 9.7e-25 117.9 65 80.0
Hund20313 Selenicereus undatus HOM05D006544 ORTHO05D008757 2.6e-22 109.8 72 70.8
CBR_g20266 Chara braunii HOM05D006544 ORTHO05D021234 1.4e-18 97.4 169 33.7
AagrBONN_evm.TU.Sc2ySwM_368.258 Anthoceros agrestis HOM05D006544 ORTHO05D021234 5.7e-17 92.0 126 34.9
Nn2g13777 Nelumbo nucifera HOM05D006544 ORTHO05D008757 9.1e-15 84.7 62 66.1
SalBow5G0971 Salvia bowleyana HOM05D008540 ORTHO05D009454 9.1e-15 84.7 46 80.4
SEGI_36386 Sequoiadendron giganteum HOM05D006544 ORTHO05D021234 5.9e-14 82.0 129 33.3
Cpa.g.sc54.74 Carica papaya HOM05D006544 ORTHO05D008757 6.5e-13 78.6 74 54.1
HPP92_009893 Vanilla planifolia HOM05D006544 ORTHO05D008757 5.5e-12 75.5 64 65.6
MCO12G278 Micromonas commoda HOM05D006544 ORTHO05D021234 1.1e-09 67.8 124 33.1


User provided reference genes

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