Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1091G114 Amborella trichopoda HOM05D007839 ORTHO05D009924 4.5e-138 494.6 250 100.0
ATR1091G011 Amborella trichopoda HOM05D007839 ORTHO05D009924 2.1e-18 97.1 121 47.1
TWI09G0569 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 2.7e-13 80.1 117 39.3
Manes.17G069900 Manihot esculenta HOM05D007839 ORTHO05D009924 1.0e-12 78.2 125 40.0
MBI07_g43266_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 1.3e-12 77.8 109 43.1
Aa31LG10G6870 Aethionema arabicum HOM05D007839 ORTHO05D009924 1.7e-12 77.4 165 31.5
CiPaw.09G123500 Carya illinoinensis HOM05D007839 ORTHO05D009924 1.1e-11 74.7 119 38.7
Sabra11G0067200 Salix brachista HOM05D007839 ORTHO05D009924 2.5e-11 73.6 118 40.7
CARHR128620 Cardamine hirsuta HOM05D007839 ORTHO05D009924 5.5e-11 72.4 148 31.8
BcaB02g09533 Brassica carinata HOM05D007839 ORTHO05D009924 7.2e-11 72.0 121 36.4
BcaC02g11515 Brassica carinata HOM05D007839 ORTHO05D009924 6.1e-10 68.9 116 35.3
C04p14500 Brassica napus HOM05D007839 ORTHO05D009924 6.1e-10 68.9 116 35.3
BolC4t23033H Brassica oleracea HOM05D007839 ORTHO05D009924 6.1e-10 68.9 116 35.3
AL4G30500 Arabidopsis lyrata HOM05D007839 ORTHO05D009924 8.0e-10 68.6 118 36.4
C04p63860 Brassica napus HOM05D007839 ORTHO05D009924 8.0e-10 68.6 116 34.5
BraA04t18149Z Brassica rapa HOM05D007839 ORTHO05D009924 8.0e-10 68.6 116 34.5
Gohir.A06G137400 Gossypium hirsutum HOM05D007839 ORTHO05D009924 1.0e-09 68.2 115 37.4
Sp4g16790 Schrenkiella parvula HOM05D007839 ORTHO05D009924 1.0e-09 68.2 118 33.1
A05p11150 Brassica napus HOM05D007839 ORTHO05D009924 1.4e-09 67.8 148 31.1
BraA05t20061Z Brassica rapa HOM05D007839 ORTHO05D009924 1.4e-09 67.8 148 31.1
Ciclev10017838m.g Citrus clementina HOM05D007839 ORTHO05D009924 1.4e-09 67.8 106 39.6
FAN16G2540 Fragaria x ananassa HOM05D000499 ORTHO05D006980 1.4e-09 67.8 118 41.5
Carub.0004s1620 Capsella rubella HOM05D007839 ORTHO05D009924 1.8e-09 67.4 118 34.7
FAN25G1788 Fragaria x ananassa HOM05D007839 ORTHO05D009924 2.3e-09 67.0 118 39.8
BolC4t27853H Brassica oleracea HOM05D007839 ORTHO05D009924 3.0e-09 66.6 116 34.5
Cfa000944 Carpinus fangiana HOM05D007839 ORTHO05D009924 3.0e-09 66.6 118 38.1
Thhalv10017730m.g Eutrema salsugineum HOM05D007839 ORTHO05D009924 4.0e-09 66.2 106 34.9
TWI73G0663 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 5.2e-09 65.9 126 35.7
AT2G34530 Arabidopsis thaliana HOM05D007839 ORTHO05D009924 6.8e-09 65.5 118 35.6
CANSAT35G0562 Cannabis sativa HOM05D007839 ORTHO05D009924 6.8e-09 65.5 119 37.0
TWI73G0350 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 6.8e-09 65.5 126 36.5
Peaxi162Scf00008g02916 Petunia axillaris HOM05D007839 ORTHO05D009924 8.8e-09 65.1 111 41.4
Atru.chr10.1228 Acer truncatum HOM05D007839 ORTHO05D009924 1.2e-08 64.7 107 37.4
arahy.Tifrunner.gnm1.ann1.EDFF2E Arachis hypogaea HOM05D007839 ORTHO05D009924 1.2e-08 64.7 135 34.1
THA.LOC104814297 Tarenaya hassleriana HOM05D007839 ORTHO05D009924 1.5e-08 64.3 165 28.5
Gorai.010G166400 Gossypium raimondii HOM05D007839 ORTHO05D009924 2.0e-08 63.9 115 35.7
RcHm_v2.0_Chr5g0014111 Rosa chinensis HOM05D007839 ORTHO05D009924 2.0e-08 63.9 122 38.5
CSS0048482 Camellia sinensis var. sinensis HOM05D007839 ORTHO05D009924 2.6e-08 63.5 118 36.4
HPP92_020033 Vanilla planifolia HOM05D007839 ORTHO05D009924 3.4e-08 63.2 119 37.8
ATR1091G017 Amborella trichopoda HOM05D007839 ORTHO05D009924 4.4e-08 62.8 115 33.9
Gohir.D06G142600 Gossypium hirsutum HOM05D007839 ORTHO05D009924 4.4e-08 62.8 115 35.7
FAN11G2724 Fragaria x ananassa HOM05D000499 ORTHO05D006980 7.5e-08 62.0 122 36.1
Prupe.4G080500 Prunus persica HOM05D007839 ORTHO05D009924 7.5e-08 62.0 117 34.2
QL05p058124 Quercus lobata HOM05D007839 ORTHO05D009924 7.5e-08 62.0 119 32.8
FvH4_3g05560 Fragaria vesca HOM05D007839 ORTHO05D009924 9.8e-08 61.6 122 36.1
MD10G1262200 Malus domestica HOM05D007839 ORTHO05D009924 9.8e-08 61.6 107 38.3
Potri.004G064800 Populus trichocarpa HOM05D007839 ORTHO05D009924 1.3e-07 61.2 119 35.3
Haze_05595 Corylus avellana HOM05D007839 ORTHO05D009924 1.7e-07 60.8 117 32.5
MD05G1283900 Malus domestica HOM05D007839 ORTHO05D009924 2.2e-07 60.5 140 34.3
Duzib235G0881 Durio zibethinus HOM05D007839 ORTHO05D009924 2.8e-07 60.1 114 34.2
QL05p058196 Quercus lobata HOM05D007839 ORTHO05D009924 2.8e-07 60.1 109 37.6
Thecc.06G150800 Theobroma cacao HOM05D007839 ORTHO05D009924 3.7e-07 59.7 128 33.6
BcaB06g28780 Brassica carinata HOM05D007839 ORTHO05D009924 4.9e-07 59.3 141 30.5
Sabra04G0043100 Salix brachista HOM05D007839 ORTHO05D009924 4.9e-07 59.3 123 37.4
RcHm_v2.0_Chr5g0014141 Rosa chinensis HOM05D007839 ORTHO05D009924 1.1e-06 58.2 118 38.1
ATR1091G001 Amborella trichopoda HOM05D007839 ORTHO05D009924 1.8e-06 57.4 75 48.0
Cpa.g.sc166.6 Carica papaya HOM05D007839 ORTHO05D009924 3.1e-06 56.6 118 33.1
CANSAT35G0336 Cannabis sativa HOM05D007839 ORTHO05D009924 5.4e-06 55.8 120 34.2
COL.COLO4_31073 Corchorus olitorius HOM05D007839 ORTHO05D009924 7.0e-06 55.5 101 34.7
Sed0023114 Sechium edule HOM05D007839 ORTHO05D009924 7.0e-06 55.5 108 37.0
ATR1091G077 Amborella trichopoda HOM05D007839 ORTHO05D009924 9.2e-06 55.1 90 35.6
CsaV3_6G051740 Cucumis sativus L. HOM05D007839 ORTHO05D009924 9.2e-06 55.1 127 33.9


User provided reference genes

Program Settings