Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1091G108 Amborella trichopoda HOM05D000922 ORTHO05D008200 5.0e-82 307.8 160 100.0
Nn3g16820 Nelumbo nucifera HOM05D000922 ORTHO05D008200 6.8e-63 244.2 158 81.0
DCAR_026150 Daucus carota HOM05D000922 ORTHO05D008200 2.2e-61 239.2 153 79.7
Aqoxy3G02881 Aquilegia oxysepala HOM05D000922 ORTHO05D008200 8.3e-61 237.3 154 80.5
Nitab4.5_0000514g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 1.4e-60 236.5 153 78.4
Nitab4.5_0008678g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 1.4e-60 236.5 153 78.4
PGSC0003DMG400018154 Solanum tuberosum HOM05D000922 ORTHO05D008200 1.9e-60 236.1 153 77.8
CAN.G1166.6 Capsicum annuum HOM05D000922 ORTHO05D008200 2.4e-60 235.7 153 77.8
CsaV3_1G008590 Cucumis sativus L. HOM05D000922 ORTHO05D008200 3.2e-60 235.3 157 77.7
Manes.14G064200 Manihot esculenta HOM05D000922 ORTHO05D008200 3.2e-60 235.3 155 78.7
Sed0005243 Sechium edule HOM05D000922 ORTHO05D008200 3.2e-60 235.3 155 78.1
Sopen03g031890 Solanum pennellii HOM05D000922 ORTHO05D008200 5.4e-60 234.6 153 77.1
Thecc.03G014600 Theobroma cacao HOM05D000922 ORTHO05D008200 9.2e-60 233.8 155 76.8
Gohir.D09G167000 Gossypium hirsutum HOM05D000922 ORTHO05D008200 1.2e-59 233.4 155 76.8
Gorai.006G188800 Gossypium raimondii HOM05D000922 ORTHO05D008200 1.2e-59 233.4 155 76.8
COL.COLO4_30070 Corchorus olitorius HOM05D000922 ORTHO05D008200 1.6e-59 233.0 155 77.4
MELO3C002273.2 Cucumis melo HOM05D000922 ORTHO05D008200 1.6e-59 233.0 157 76.4
Sabra15G0103100 Salix brachista HOM05D000922 ORTHO05D008200 1.6e-59 233.0 154 78.6
Solyc03g112810.3 Solanum lycopersicum HOM05D000922 ORTHO05D008200 1.6e-59 233.0 153 77.1
Duzib205G0455 Durio zibethinus HOM05D000922 ORTHO05D008200 2.7e-59 232.3 155 76.8
Gohir.A09G171300 Gossypium hirsutum HOM05D000922 ORTHO05D008200 2.7e-59 232.3 155 76.1
Lj5C125T23 Lonicera japonica HOM05D000922 ORTHO05D008200 2.7e-59 232.3 156 77.6
ClCG01G013230 Citrullus lanatus HOM05D000922 ORTHO05D008200 3.5e-59 231.9 159 76.7
Hund09449 Selenicereus undatus HOM05D000922 ORTHO05D008200 3.5e-59 231.9 159 75.5
CiPaw.11G024500 Carya illinoinensis HOM05D000922 ORTHO05D008200 7.8e-59 230.7 156 76.9
CSS0000249 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D008200 2.3e-58 229.2 157 75.2
QL10p010977 Quercus lobata HOM05D000922 ORTHO05D008200 2.3e-58 229.2 153 75.8
CANSAT80G0818 Cannabis sativa HOM05D000922 ORTHO05D008200 3.0e-58 228.8 153 75.8
Dinv20636 Davidia involucrata HOM05D000922 ORTHO05D008200 3.0e-58 228.8 157 74.5
TAR629G0323 Trochodendron aralioides HOM05D000922 ORTHO05D008200 3.0e-58 228.8 158 75.3
Potri.015G078600 Populus trichocarpa HOM05D000922 ORTHO05D008200 5.1e-58 228.0 154 76.6
Atru.chr9.2496 Acer truncatum HOM05D000922 ORTHO05D008200 6.6e-58 227.6 158 72.8
MSTRG.11466 Avicennia marina HOM05D000922 ORTHO05D008200 8.6e-58 227.3 158 74.1
EL10Ac9g21439 Beta vulgaris HOM05D000922 ORTHO05D008200 8.6e-58 227.3 162 72.8
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 8.6e-58 227.3 157 74.5
Eucgr.G00068 Eucalyptus grandis HOM05D000922 ORTHO05D008200 1.5e-57 226.5 156 75.0
Prupe.5G171600 Prunus persica HOM05D000922 ORTHO05D008200 1.5e-57 226.5 155 74.8
arahy.Tifrunner.gnm1.ann1.RA2V7W Arachis hypogaea HOM05D000922 ORTHO05D008200 1.9e-57 226.1 155 77.4
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 2.5e-57 225.7 158 75.3
AUR62013091 Chenopodium quinoa HOM05D000922 ORTHO05D008200 3.3e-57 225.3 159 72.3
Ciclev10022297m.g Citrus clementina HOM05D000922 ORTHO05D008200 4.3e-57 224.9 155 74.8
FAN13G3248 Fragaria x ananassa HOM05D000922 ORTHO05D008200 5.6e-57 224.6 153 75.8
unitig_0.g1435 Utricularia gibba HOM05D000922 ORTHO05D008200 7.3e-57 224.2 155 73.5
AUR62010095 Chenopodium quinoa HOM05D000922 ORTHO05D008200 9.5e-57 223.8 159 72.3
MD14G1178100 Malus domestica HOM05D000922 ORTHO05D008200 9.5e-57 223.8 155 74.2
PGR044G1577 Punica granatum HOM05D000922 ORTHO05D008200 9.5e-57 223.8 156 75.0
TWI39G0231 Tripterygium wilfordii HOM05D000922 ORTHO05D008200 9.5e-57 223.8 155 74.8
FAN04G0130 Fragaria x ananassa HOM05D000922 ORTHO05D008200 2.1e-56 222.6 153 75.2
Medtr4g105570 Medicago truncatula HOM05D000922 ORTHO05D008200 2.1e-56 222.6 154 72.1
arahy.Tifrunner.gnm1.ann1.HJA5XH Arachis hypogaea HOM05D000922 ORTHO05D008200 4.7e-56 221.5 155 76.1
Peaxi162Scf00089g01850 Petunia axillaris HOM05D000922 ORTHO05D008200 4.7e-56 221.5 157 75.2
Cc04_g12150 Coffea canephora HOM05D000922 ORTHO05D008200 6.2e-56 221.1 157 72.0
RcHm_v2.0_Chr7g0193351 Rosa chinensis HOM05D000922 ORTHO05D008200 6.2e-56 221.1 155 73.5
vmacro19401 Vaccinium macrocarpon HOM05D000922 ORTHO05D008200 6.2e-56 221.1 156 73.7
VMungo1215G1163 Vigna mungo HOM05D000922 ORTHO05D008200 6.2e-56 221.1 153 73.9
HPP92_011872 Vanilla planifolia HOM05D000922 ORTHO05D008200 8.1e-56 220.7 152 73.7
THA.LOC104818216 Tarenaya hassleriana HOM05D000922 ORTHO05D008200 1.4e-55 219.9 151 73.5
CARHR276810 Cardamine hirsuta HOM05D000922 ORTHO05D008200 1.8e-55 219.5 153 73.2
Haze_07527 Corylus avellana HOM05D000922 ORTHO05D008200 2.3e-55 219.2 154 74.7
Glyma.17G088100 Glycine max HOM05D000922 ORTHO05D008200 2.3e-55 219.2 155 73.5
Lsat_1_v5_gn_5_15061 Lactuca sativa HOM05D000922 ORTHO05D008200 2.3e-55 219.2 148 76.4
MD06G1172200 Malus domestica HOM05D000922 ORTHO05D008200 2.3e-55 219.2 155 72.9
Phvul.003G201800 Phaseolus vulgaris HOM05D000922 ORTHO05D008200 2.3e-55 219.2 153 72.5
Carub.0008s2371 Capsella rubella HOM05D000922 ORTHO05D008200 3.1e-55 218.8 154 74.0
FAN18G2418 Fragaria x ananassa HOM05D000922 ORTHO05D008200 3.1e-55 218.8 153 73.9
FAN18G3465 Fragaria x ananassa HOM05D000922 ORTHO05D008200 3.1e-55 218.8 153 73.9
Lj4g0019609 Lotus japonicus HOM05D000922 ORTHO05D008200 3.1e-55 218.8 155 72.3
AT5G63000 Arabidopsis thaliana HOM05D000922 ORTHO05D008200 4.0e-55 218.4 153 72.5
GSVIVG01007722001 Vitis vinifera HOM05D000922 ORTHO05D008200 4.0e-55 218.4 156 73.7
Zm00001eb332970 Zea mays HOM05D000922 ORTHO05D008200 5.2e-55 218.0 158 71.5
AL8G40030 Arabidopsis lyrata HOM05D000922 ORTHO05D008200 1.2e-54 216.9 154 72.7
Thhalv10004944m.g Eutrema salsugineum HOM05D000922 ORTHO05D008200 1.2e-54 216.9 153 71.9
MBI16_g39217_MAGBIO Magnolia biondii HOM05D000922 ORTHO05D008200 1.2e-54 216.9 176 65.9
FvH4_5g05480 Fragaria vesca HOM05D000922 ORTHO05D008200 1.5e-54 216.5 153 73.2
Lalb_Chr12g0201661 Lupinus albus HOM05D000922 ORTHO05D008200 1.5e-54 216.5 155 71.6
Os01g0271000 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D008200 1.5e-54 216.5 160 71.2
Psat4g058400 Pisum sativum HOM05D000922 ORTHO05D008200 1.5e-54 216.5 153 70.6
HanXRQChr05g0155781 Helianthus annuus HOM05D000922 ORTHO05D008200 2.0e-54 216.1 155 72.9
Ca_21935_v3 Cicer arietinum L. HOM05D000922 ORTHO05D008200 3.4e-54 215.3 155 71.6
ECA246G4361 Erigeron canadensis HOM05D000922 ORTHO05D008200 3.4e-54 215.3 153 71.9
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 5.8e-54 214.5 153 70.6
BcaC01g02547 Brassica carinata HOM05D000922 ORTHO05D008200 9.9e-54 213.8 153 70.6
A06p29780 Brassica napus HOM05D000922 ORTHO05D008200 9.9e-54 213.8 153 70.6
C03p63610 Brassica napus HOM05D000922 ORTHO05D008200 9.9e-54 213.8 153 70.6
BolC3t18619H Brassica oleracea HOM05D000922 ORTHO05D008200 9.9e-54 213.8 153 70.6
PSO832G1073 Papaver somniferum HOM05D000922 ORTHO05D008200 9.9e-54 213.8 158 69.6
BraA06t25925Z Brassica rapa HOM05D000922 ORTHO05D008200 1.3e-53 213.4 153 70.6
PGR044G0925 Punica granatum HOM05D000922 ORTHO05D008200 1.3e-53 213.4 156 71.8
SalBow1G6106 Salvia bowleyana HOM05D000922 ORTHO05D008200 1.3e-53 213.4 154 72.1
SalBow5G5253 Salvia bowleyana HOM05D000922 ORTHO05D008200 1.3e-53 213.4 154 72.1
Sp2g26130 Schrenkiella parvula HOM05D000922 ORTHO05D008200 1.7e-53 213.0 153 70.6
arahy.Tifrunner.gnm1.ann1.R1G0J4 Arachis hypogaea HOM05D000922 ORTHO05D008200 2.9e-53 212.2 165 71.5
BcaB02g09714 Brassica carinata HOM05D000922 ORTHO05D008200 8.3e-53 210.7 155 69.7
CDE07G1875 Ceratophyllum demersum HOM05D000922 ORTHO05D008200 8.3e-53 210.7 123 85.4
SGA_v2.0_scaffold90G27896 Striga asiatica HOM05D000922 ORTHO05D008200 5.4e-52 208.0 124 82.3
arahy.Tifrunner.gnm1.ann1.3C9G4H Arachis hypogaea HOM05D000922 ORTHO05D008200 1.2e-51 206.8 152 73.7
Migut.O00114 Erythranthe guttata HOM05D000922 ORTHO05D008200 3.5e-51 205.3 145 69.7
FAN08G1692 Fragaria x ananassa HOM05D000922 ORTHO05D008200 3.5e-51 205.3 174 65.5
Sc04g0001730 Simmondsia chinensis HOM05D000922 ORTHO05D008200 4.0e-47 191.8 113 84.1
Manes.05G195400 Manihot esculenta HOM05D000922 ORTHO05D008200 2.0e-46 189.5 134 73.1
TAR371G0469 Trochodendron aralioides HOM05D000922 ORTHO05D008200 1.9e-44 183.0 134 70.9
arahy.Tifrunner.gnm1.ann1.UWQ2W3 Arachis hypogaea HOM05D000922 ORTHO05D008200 9.2e-44 180.6 133 72.2
SEGI_40590 Sequoiadendron giganteum HOM05D000922 ORTHO05D008200 2.7e-43 179.1 151 61.6
Oeu023435.1 Olea europaea HOM05D000922 ORTHO05D008200 4.6e-43 178.3 106 83.0
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 6.0e-43 177.9 274 43.4
SHI38067 Sapria himalayana HOM05D000922 ORTHO05D008200 1.4e-39 166.8 155 58.1
Glyma.05G038900 Glycine max HOM05D000922 ORTHO05D008200 3.4e-38 162.2 100 81.0
Cfa019117 Carpinus fangiana HOM05D000922 ORTHO05D008200 5.6e-33 144.8 85 87.1
arahy.Tifrunner.gnm1.ann1.Q2CJ89 Arachis hypogaea HOM05D000922 ORTHO05D008200 1.1e-31 140.6 146 57.5
EL10Ac5g12019 Beta vulgaris HOM05D000922 ORTHO05D008200 3.4e-30 135.6 87 78.2
arahy.Tifrunner.gnm1.ann1.PQAW0Q Arachis hypogaea HOM05D000922 ORTHO05D008200 1.3e-29 133.7 84 81.0
TPR.G37467 Trifolium pratense HOM05D000922 ORTHO05D008200 3.8e-29 132.1 84 79.8
Mapoly0191s0008 Marchantia polymorpha HOM05D000922 ORTHO05D008200 1.1e-25 120.6 165 41.8
Peaxi162Scf00089g01839 Petunia axillaris HOM05D000922 ORTHO05D008200 2.5e-25 119.4 155 48.4
AagrBONN_evm.TU.Sc2ySwM_228.4800 Anthoceros agrestis HOM05D000922 ORTHO05D008200 3.1e-23 112.5 136 44.9
TPR.G11031 Trifolium pratense HOM05D000922 ORTHO05D008200 1.2e-22 110.5 91 62.6
arahy.Tifrunner.gnm1.ann1.JAVP2G Arachis hypogaea HOM05D000922 ORTHO05D008200 3.4e-22 109.0 133 50.4
CBR_g38960 Chara braunii HOM05D000922 ORTHO05D008200 4.6e-19 98.6 163 38.0
Pp3c17_17380 Physcomitrium patens HOM05D000922 ORTHO05D008200 5.1e-18 95.1 147 38.8
SMO111G0048 Selaginella moellendorffii HOM05D000922 ORTHO05D008200 5.1e-18 95.1 95 48.4
MCO04G383 Micromonas commoda HOM05D000922 ORTHO05D008200 1.1e-07 60.8 139 28.8
Cpa.g.sc76.32 Carica papaya HOM05D000922 ORTHO05D008200 1.8e-07 60.1 131 33.6
Medtr4g105580 Medicago truncatula HOM05D000922 ORTHO05D008200 9.0e-07 57.8 71 39.4


User provided reference genes

Program Settings