Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 0.0e+00 2143.2 1113 100.0
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 5.2e-226 788.9 1200 43.7
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 5.2e-218 762.3 1177 42.4
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 3.8e-213 746.1 1135 42.4
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 4.2e-212 742.7 1149 42.8
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 1.4e-210 737.6 1170 42.1
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 8.8e-210 734.9 1152 46.3
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 1.4e-207 727.6 1226 41.2
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 4.1e-207 726.1 1120 44.8
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 2.0e-206 723.8 1144 42.4
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 4.5e-206 722.6 1190 41.3
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 7.8e-206 721.8 1156 44.8
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 1.3e-205 721.1 1133 45.3
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 3.8e-205 719.5 1173 41.2
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 4.7e-203 712.6 1147 41.9
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 8.0e-203 711.8 1147 43.0
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 1.4e-202 711.1 1178 43.6
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 3.0e-202 709.9 1149 41.9
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 8.9e-202 708.4 1144 41.5
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 8.9e-202 708.4 1156 42.6
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 1.3e-200 704.5 1118 43.6
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 1.7e-200 704.1 1161 41.8
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 4.9e-200 702.6 1202 39.9
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 1.4e-199 701.0 1159 39.8
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 2.0e-198 697.2 1160 43.5
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 5.0e-197 692.6 1132 41.2
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 1.9e-196 690.6 560 62.0
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 5.6e-196 689.1 1121 40.7
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.6e-195 687.6 943 45.7
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 4.7e-195 686.0 1144 42.2
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 6.2e-195 685.6 1160 40.3
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.1e-194 684.9 1208 43.0
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 5.2e-194 682.6 1194 42.3
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 6.8e-194 682.2 1136 41.1
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 8.9e-194 681.8 1136 43.4
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 1.5e-193 681.0 929 45.7
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 3.4e-193 679.9 1120 40.0
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 7.5e-193 678.7 1253 39.0
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 1.1e-191 674.9 1130 39.6
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 1.4e-191 674.5 1167 43.5
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 5.4e-191 672.5 1128 39.4
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 3.5e-190 669.8 1143 39.1
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 7.3e-188 662.1 1138 40.5
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 2.1e-187 660.6 1148 39.3
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 4.7e-187 659.4 1147 40.5
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 8.9e-186 655.2 1167 38.7
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 3.4e-185 653.3 1140 38.6
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 7.5e-185 652.1 572 58.9
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 2.9e-184 650.2 585 57.1
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 1.9e-183 647.5 1182 38.4
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 1.2e-182 644.8 582 57.4
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 4.6e-182 642.9 1128 37.4
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 7.8e-182 642.1 931 43.1
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 7.8e-182 642.1 1145 38.4
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 5.1e-181 639.4 1056 39.9
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 1.9e-180 637.5 1170 38.2
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 9.5e-180 635.2 567 57.5
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 2.1e-179 634.0 578 56.7
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 2.8e-179 633.6 589 56.0
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 3.6e-179 633.3 681 50.8
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 6.2e-179 632.5 1132 37.9
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 1.4e-178 631.3 572 56.5
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 5.2e-178 629.4 1184 37.9
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 8.9e-178 628.6 573 56.9
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 2.6e-177 627.1 575 56.2
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 4.4e-177 626.3 1129 38.4
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 3.8e-176 623.2 1151 37.6
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 9.2e-175 618.6 1145 39.6
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 9.2e-175 618.6 1056 38.8
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 1.0e-173 615.1 1149 39.2
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 3.9e-173 613.2 586 54.3
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 3.3e-172 610.1 1168 37.0
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 1.6e-171 607.8 582 53.8
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 2.8e-171 607.1 1130 38.0
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 5.2e-170 602.8 1120 37.4
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 5.2e-170 602.8 1113 37.1
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 2.0e-169 600.9 1168 37.2
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 2.6e-169 600.5 1114 36.7
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 4.4e-169 599.7 1143 37.1
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 1.3e-168 598.2 577 52.2
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 1.7e-168 597.8 1200 36.7
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 6.4e-168 595.9 1159 38.1
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 1.9e-167 594.3 1134 37.4
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 9.3e-167 592.0 560 53.9
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 1.2e-166 591.7 563 53.6
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 1.6e-166 591.3 564 53.7
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 2.7e-166 590.5 564 54.1
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 4.6e-166 589.7 1110 37.0
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 7.8e-166 589.0 564 53.5
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 3.0e-165 587.0 564 53.2
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 2.0e-161 574.3 1022 38.0
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 2.9e-160 570.5 571 52.2
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 1.4e-159 568.2 1028 37.9
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 1.8e-157 561.2 1043 37.9
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 6.2e-155 552.7 1035 37.9
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 1.3e-152 545.0 1118 35.0
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 4.9e-152 543.1 986 37.0
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 4.2e-143 513.5 772 45.1
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 1.3e-139 501.9 980 39.6
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 2.2e-136 491.1 413 60.5
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 2.0e-129 468.0 614 44.5
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 2.9e-128 464.2 784 38.8
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 1.2e-126 458.8 529 45.2
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 3.0e-125 454.1 1169 33.0
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 1.3e-123 448.7 586 45.1
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 1.4e-122 445.3 540 46.1
Actinidia33077 Actinidia chinensis HOM05D000922 ORTHO05D007418 6.3e-115 419.9 358 58.9
Cpa.g.sc2974.2 Carica papaya HOM05D000922 ORTHO05D007418 5.0e-112 410.2 317 64.4
CsaV3_1G001450 Cucumis sativus L. HOM05D000922 ORTHO05D007418 1.2e-108 399.1 932 34.1
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 2.9e-104 384.4 760 33.0
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 6.5e-104 383.3 1154 29.9
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 8.0e-86 323.2 912 31.5
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 2.2e-83 315.1 870 30.8
Cpa.g.sc2974.1 Carica papaya HOM05D000922 ORTHO05D007418 4.6e-65 254.2 750 32.9
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 1.5e-63 249.2 229 58.5
ECA246G4214 Erigeron canadensis HOM05D000922 ORTHO05D007418 1.5e-63 249.2 224 54.9
C01p31950 Brassica napus HOM05D000922 ORTHO05D007418 2.4e-53 215.3 177 58.2
ECA246G0682 Erigeron canadensis HOM05D000922 ORTHO05D007418 2.4e-50 205.3 728 29.4
CDE07G0520 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 2.2e-35 155.6 279 35.5
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 7.4e-15 87.4 77 57.1
PRCOL_00005721 Prasinoderma coloniale HOM05D000922 ORTHO05D007418 1.4e-13 83.2 163 33.7
Peaxi162Scf01130g00212 Petunia axillaris HOM05D000861 ORTHO05D007418 9.1e-13 80.5 87 46.0
CAN.G1651.1 Capsicum annuum HOM05D003439 ORTHO05D000484 1.5e-12 79.7 54 59.3
Peaxi162Scf00397g00009 Petunia axillaris HOM05D000922 ORTHO05D015732 2.0e-12 79.3 57 54.4
Peaxi162Scf00009g02111 Petunia axillaris HOM05D000861 ORTHO05D007418 2.6e-12 79.0 51 62.7
Peaxi162Scf00304g01332 Petunia axillaris HOM05D000922 ORTHO05D007418 1.0e-11 77.0 55 58.2
Peaxi162Scf00470g00024 Petunia axillaris HOM05D000861 ORTHO05D007418 1.7e-11 76.3 51 62.7
Actinidia33076 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.4e-10 73.2 170 32.4
vmacro19400 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 1.4e-10 73.2 326 29.8
Lalb_Chr23g0273291 Lupinus albus HOM05D000922 ORTHO05D007418 1.7e-06 59.7 339 27.1


User provided reference genes

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